Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g091830.3.1
CDS Infomation

DUF4378 domain protein (AHRD V3.3 *** AT4G00770.1)
Sequence

ATGGCTTCTTCATCTCCTAGTCCACTTGCAAGATTATCACTTGAGCGTAGACCCAAATTG
CTTAAAGAATTTCTTCTTCAAGACGATCCATATTCATCAAATGATTTTGGATCATACCCT
AACAAATACATTCATGGTTCAACAATTATTAGGTCAAACAAAGGTTCATCTCATCAATTA
CTCAGAAGTCGATCATCTAGAGCCGCAACTGCTACAATCTCCGCGATTAATAAGGTCATC
AGCATTGTCAAGTTCTTACCTTTTACCTCTGTAAAATCTCCTTCCATTTTCCCTAGAAAC
ATTTCAAGAAAACTATCAAGGAAGAATAACTACAAGAAAAGTCAAAAACATAACGTTGAT
CAAGATGTCTCCGTTAAAGTCAAAGTCAAAGACATCTTGCGATGGAAATCATTTAGAGAC
TTAGCGGAAGAGAAATCAACACCTTTAGATTCTTCTTATTCACCGTATAGGTACGGTACA
ATCACTGCCATGACCACGACCACAATCACGACCGGCAAGAGAACAAGTTGGTGTGATAGC
GATTCTACCGCGGAGGATTTACCGTCATGGTGGGGTGAAAATGGTGAACTTTTGGGTAGA
AAAAATAGTGTCGGAGGATATTGCATGGAAACCACAAAATCAATTATTAATAAGGAAGAG
CTGTGTTTTGATGAGAATGAGCAACATAGCCCAGTTTCAATTCTTGAATCTCCATTTCAA
GAAGATGATGATGAAGGAAGTATGGCTTTCTCTTTCCAGAAAAGAAAAAGCATGCTTCTG
CATAGAATTCAACAATTTGAGAGTCTTGCTGAAGAAAACATCAACTCTAAAGTAGAAGAA
GAACTAAAAGAAGATGAGGAAATTGAAGAAAAGGCAAAGCAATTGTTGATCAATTGTGAA
GTAAACTATATGGATGATGATCAACTTCTCTTTGATTTCTTTTGGAATGAATTGATTACA
AGTGGAAAAAAACATCAAAACAATGTTAGTAATGTTGATGAAAAGCTATTAAGAGAGGCA
AAATCTTGGATCAATGATGATTACAATGAGGAATTTGAATGGGAAATTGAGGATAAAAGA
GAAGCCTATATAAAAGACATGGAAAAAGTAGCAAATTGGAACAAGTTTGAAGAGGAAAAA
CAAGAGTTTATCTTGGATTTGGAGTTTGAAGTGTTCAATGATTTGGTCAATGAAGTCTTG
GTAGATGTTTTTTCTCATAATTAG

Peptide Sequence

PEP ID

Solyc01g091830.3.1
PEP Infomation

DUF4378 domain protein (AHRD V3.3 *** AT4G00770.1)
Sequence

MASSSPSPLARLSLERRPKLLKEFLLQDDPYSSNDFGSYPNKYIHGSTIIRSNKGSSHQL
LRSRSSRAATATISAINKVISIVKFLPFTSVKSPSIFPRNISRKLSRKNNYKKSQKHNVD
QDVSVKVKVKDILRWKSFRDLAEEKSTPLDSSYSPYRYGTITAMTTTTITTGKRTSWCDS
DSTAEDLPSWWGENGELLGRKNSVGGYCMETTKSIINKEELCFDENEQHSPVSILESPFQ
EDDDEGSMAFSFQKRKSMLLHRIQQFESLAEENINSKVEEELKEDEEIEEKAKQLLINCE
VNYMDDDQLLFDFFWNELITSGKKHQNNVSNVDEKLLREAKSWINDDYNEEFEWEIEDKR
EAYIKDMEKVANWNKFEEEKQEFILDLEFEVFNDLVNEVLVDVFSHN*

Transcript Sequence

Transcript ID

Solyc01g091830.3.1
Transcript Infomation

DUF4378 domain protein (AHRD V3.3 *** AT4G00770.1)
Sequence

AACTCAACCCCACCAAAACAAAAGAAAGAGAGAGAGAGAGAAAGAGCAAGAATACTCTTT
TTGACATATAAGTTTTAGCCATGGCTTCTTCATCTCCTAGTCCACTTGCAAGATTATCAC
TTGAGCGTAGACCCAAATTGCTTAAAGAATTTCTTCTTCAAGACGATCCATATTCATCAA
ATGATTTTGGATCATACCCTAACAAATACATTCATGGTTCAACAATTATTAGGTCAAACA
AAGGTTCATCTCATCAATTACTCAGAAGTCGATCATCTAGAGCCGCAACTGCTACAATCT
CCGCGATTAATAAGGTCATCAGCATTGTCAAGTTCTTACCTTTTACCTCTGTAAAATCTC
CTTCCATTTTCCCTAGAAACATTTCAAGAAAACTATCAAGGAAGAATAACTACAAGAAAA
GTCAAAAACATAACGTTGATCAAGATGTCTCCGTTAAAGTCAAAGTCAAAGACATCTTGC
GATGGAAATCATTTAGAGACTTAGCGGAAGAGAAATCAACACCTTTAGATTCTTCTTATT
CACCGTATAGGTACGGTACAATCACTGCCATGACCACGACCACAATCACGACCGGCAAGA
GAACAAGTTGGTGTGATAGCGATTCTACCGCGGAGGATTTACCGTCATGGTGGGGTGAAA
ATGGTGAACTTTTGGGTAGAAAAAATAGTGTCGGAGGATATTGCATGGAAACCACAAAAT
CAATTATTAATAAGGAAGAGCTGTGTTTTGATGAGAATGAGCAACATAGCCCAGTTTCAA
TTCTTGAATCTCCATTTCAAGAAGATGATGATGAAGGAAGTATGGCTTTCTCTTTCCAGA
AAAGAAAAAGCATGCTTCTGCATAGAATTCAACAATTTGAGAGTCTTGCTGAAGAAAACA
TCAACTCTAAAGTAGAAGAAGAACTAAAAGAAGATGAGGAAATTGAAGAAAAGGCAAAGC
AATTGTTGATCAATTGTGAAGTAAACTATATGGATGATGATCAACTTCTCTTTGATTTCT
TTTGGAATGAATTGATTACAAGTGGAAAAAAACATCAAAACAATGTTAGTAATGTTGATG
AAAAGCTATTAAGAGAGGCAAAATCTTGGATCAATGATGATTACAATGAGGAATTTGAAT
GGGAAATTGAGGATAAAAGAGAAGCCTATATAAAAGACATGGAAAAAGTAGCAAATTGGA
ACAAGTTTGAAGAGGAAAAACAAGAGTTTATCTTGGATTTGGAGTTTGAAGTGTTCAATG
ATTTGGTCAATGAAGTCTTGGTAGATGTTTTTTCTCATAATTAGTACATTGAATAATTTC
ATGTGTCGTATAATTGACATGTGTAGAACATGTTATAACACATACAAGTAAATTATAGAT
CGATAAGATATTAGGATACTTTTTTTTTTTTTTATAGTTGTAGTTATAATATGTTTCCCT
TTCAATTAACGAAAGAGGAGGAAGTATATGAATAGTGCTTTTCAATTCTCTCTCTCTTTT
TTTTGGTTGCTTTTGTACATATTACATAATAATAAAAATTCAAGTATTTCTTTGTTTCTA
TGATTTCCTGTTGTATTTTCTCATTAACGATCGATTTTT