Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g091580.3.1
CDS Infomation

Signal recognition particle receptor family protein (AHRD V3.3 *** B9IC92_POPTR)
Sequence

ATGGCTTCAACGTTATCTTCTCGTCTCCCACGTCTTCCTTCCAAAACGGTATTCCCACAT
TCTAACTCCGGTTCAACTCTCCTCCACTTCACATCCAAAACCCGGTTCGATCAGTCCCGG
TTTAGATGCTCGGCGGGTCAAACGGGGTTCTTCACGAAGCTTGGTCGTTTGCTGAAAGAG
AAAGCCAAGAGTGATGTGGAGAAACTGTTCTCAGGATTCTCAAAAACTCGAGACAATTTA
GCTGTTATTGATGAACTCCTCCTTTACTGGAACCTTTCTGATACTGATCGTGTTCTTGAT
GAACTTGAAGAGGTTCTGTTGGTCGCTGATTTTGGGCCGAAGATTACCATAAAGATTGTG
GAGAGCTTGCGGGAGGATATATATGCAGGGAAAATCAAATCAGGAAGTGAGATAAAAAGT
GTTCTAAAGAAGAGTATCTTGGATCTATTGACTAGTAAAGCACCTAAAACAGAACTCAGT
CTGGGCTTCAGGAAACCAGCTGTAATCATGATTGTGGGTGTCAATGGAGGTGGGAAGACA
ACATCTCTTGGAAAGTTGGCAAATAGGTTGAAGAGAGAAGGGGCAAAGATACTATTAGCA
GCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGTTAGAAATCTGGGCTGAAAGGACT
GGTTGTGAGATTGTTGTTGCTGAAAAAGAGAAAGCTAAGGCATCGTCAGTTATTTCACAG
GCTGTTAAAAGAGGAAAGGAAGAGGGTTTCGATATTGTTTTATGCGACACATCTGGCCGT
TTGCACACCAACTATAGCTTGATGGAGGAATTGGTGGCATGCAAAAAAGTTGTCAGTAAA
ATTGTTAATGGTGCACCTAATGAAATCTTGCTAGTACTGGATGGAACGACTGGTTTAAAT
ATGCTTCCTCAAGCAAGAGAGTTTAATGAGGTTGTTGGAATCACTGGGTTAATATTGACT
AAACTTGATGGTTCTGCTCGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGTATT
CCTGTAAAATTTGTAGGTGTTGGGGAAGGTGTAGATGACCTCCAACCATTCAATGCTGAG
GAATTTGTTGATGCTATCTTCCCATGA

Peptide Sequence

PEP ID

Solyc01g091580.3.1
PEP Infomation

Signal recognition particle receptor family protein (AHRD V3.3 *** B9IC92_POPTR)
Sequence

MASTLSSRLPRLPSKTVFPHSNSGSTLLHFTSKTRFDQSRFRCSAGQTGFFTKLGRLLKE
KAKSDVEKLFSGFSKTRDNLAVIDELLLYWNLSDTDRVLDELEEVLLVADFGPKITIKIV
ESLREDIYAGKIKSGSEIKSVLKKSILDLLTSKAPKTELSLGFRKPAVIMIVGVNGGGKT
TSLGKLANRLKREGAKILLAAGDTFRAAASDQLEIWAERTGCEIVVAEKEKAKASSVISQ
AVKRGKEEGFDIVLCDTSGRLHTNYSLMEELVACKKVVSKIVNGAPNEILLVLDGTTGLN
MLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVDDLQPFNAE
EFVDAIFP*

Transcript Sequence

Transcript ID

Solyc01g091580.3.1
Transcript Infomation

Signal recognition particle receptor family protein (AHRD V3.3 *** B9IC92_POPTR)
Sequence

AAATAATTCTTAACTTTTTTTTATACAATTATAAACTTTCTAATATAAAAAAATAAACAT
GCTAAGTATTTCGAAATTATTAGGTGTAAAAATTCTTTTTGAAAACTAAAAGAGAGAAAA
AAAAGAATGTTAAAGAGCAATAAAACGGCGTCGTGTGAAGCTGCATTATCTTCTCCATTG
CTGCTTCTGAGCTGAACGAAATGGCTTCAACGTTATCTTCTCGTCTCCCACGTCTTCCTT
CCAAAACGGTATTCCCACATTCTAACTCCGGTTCAACTCTCCTCCACTTCACATCCAAAA
CCCGGTTCGATCAGTCCCGGTTTAGATGCTCGGCGGGTCAAACGGGGTTCTTCACGAAGC
TTGGTCGTTTGCTGAAAGAGAAAGCCAAGAGTGATGTGGAGAAACTGTTCTCAGGATTCT
CAAAAACTCGAGACAATTTAGCTGTTATTGATGAACTCCTCCTTTACTGGAACCTTTCTG
ATACTGATCGTGTTCTTGATGAACTTGAAGAGGTTCTGTTGGTCGCTGATTTTGGGCCGA
AGATTACCATAAAGATTGTGGAGAGCTTGCGGGAGGATATATATGCAGGGAAAATCAAAT
CAGGAAGTGAGATAAAAAGTGTTCTAAAGAAGAGTATCTTGGATCTATTGACTAGTAAAG
CACCTAAAACAGAACTCAGTCTGGGCTTCAGGAAACCAGCTGTAATCATGATTGTGGGTG
TCAATGGAGGTGGGAAGACAACATCTCTTGGAAAGTTGGCAAATAGGTTGAAGAGAGAAG
GGGCAAAGATACTATTAGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGTTAG
AAATCTGGGCTGAAAGGACTGGTTGTGAGATTGTTGTTGCTGAAAAAGAGAAAGCTAAGG
CATCGTCAGTTATTTCACAGGCTGTTAAAAGAGGAAAGGAAGAGGGTTTCGATATTGTTT
TATGCGACACATCTGGCCGTTTGCACACCAACTATAGCTTGATGGAGGAATTGGTGGCAT
GCAAAAAAGTTGTCAGTAAAATTGTTAATGGTGCACCTAATGAAATCTTGCTAGTACTGG
ATGGAACGACTGGTTTAAATATGCTTCCTCAAGCAAGAGAGTTTAATGAGGTTGTTGGAA
TCACTGGGTTAATATTGACTAAACTTGATGGTTCTGCTCGAGGTGGCTGTGTGGTCAGTG
TGGTTGATGAGCTTGGTATTCCTGTAAAATTTGTAGGTGTTGGGGAAGGTGTAGATGACC
TCCAACCATTCAATGCTGAGGAATTTGTTGATGCTATCTTCCCATGAGGCATGATTCAGT
GACAGTTTCTCCTATATTCTAAGTGAACTCTCTGGTGTTAACAAGACACAAACATTTTGG
CGAGAGAGGAGTAATGAGACATTAGAAATTTTTGTCTTTAACAGAACGTGTGCCTTATGC
TCCTTTGTTTATCTAGATCTGCTCTATTTCATTGAGGATGTGTCATCAGAAGAGACACTT
AGTTGTCCAGTACGACTGATGCCATTAGTTGCATCGCCTTTTTTTAAAATCAAAAGATCA
GTGTCATCTCCTTGTCATTGTTGCAGTATTAAGTAGTAATACAGCATTGTAGTTAAAGTG
GAGTTTCATTGGACACACAGCTAATACAAGATTGATTTGCATGATTTTCTCTTTCAATAT
ATCATGGTTCAATTGTGTACTTCATCAAGCAACACTTCAGTTACAAAGACGAAACAGAAG
ACAAATAAGGGAATTTCAGATAATACGAGATATTGATATGGTGATGGCAGATACGACACT
CGAGATTATATCAATGATCTGCAATTGTACATGAGCTGGATCTGCTGAACAGGTTTAGCA
AATGTGTTGAGTTGAGTTCATAAACTTGCGATGGGCATGTGATAGAATGTTGCACTCGAG
GAGTAGACCAATTTCTTCGAGTCCTTGAGCTGAAAATCAGTTGCAACTACAGTTGTGCTC
CTTCCACTCTTAATAATAGACCCATCTACGATCACCTCTGCCTAGAGTGGGACACAAATA
CAAAAGCAAATAAATAGGAAAGAGACCCTTTTATGATGTGCATTTGGTCTTTACCAAATT
GTTACTATACAATAAGTTGTAGTTCTATTGAGGTAAAGGGAGCTTATATGAAAACTTTAA
TACTCACATTGCTTTTAGCAGTAGAAAGATACGACATTCTCAATTCTCCAAGAAAGAGCT
TCTTATCCTTTCCTACAACAGTTCTAGCACAGGCAATTGACACCGTCTCTGCGACAGCTC
CAACTGCTCCTCCATGCATGCTACCATAAATATTCTGAGGTTGCACACTTTGTCATATTA
GAGTGAGGGCAAGCCCATCCAACTAGAAGAAAAGAAACAGAGATTGAACAGAAGTGAAAA
TCAGATCCCAAATATTTTACCGAGATTGCAGATTTGACAGATAAAATGCAGGAGACTTTG
CCAGGATGGATGCTGTGGACCTTGAGACAGCCGCGAGTGAGTTCAGAGAAAGATTCATAT
CCGGCCGGAAACTTGTCCCCGTGGAGTTGCACGCGGCTGAGGAGACGATCCGCCAAGAAA
GCGGCTTCCTCAGATAAATCTTCGGAGATGATTGTGTCTTTGGTGAATGAACTCTTCGAT
TTCGAACTCTCTTCCCCCATCTACCAAAGGTTCAACTCTATATACCTAAGCAATTTGCTA
TCCAATCAACAAATTTAATTTTGAA