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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g091420.2.1
CDS Infomation

LOB domain-containing protein, putative (AHRD V3.3 *** B9RDE1_RICCO)
Sequence

ATGAGCTCAAATAACCATAGTAGTAGCACCGGTGGTGTCTCCGCCCCAGGCGGAGGAGTG
ACTAGTGGAAGTACTAGTAGTGGAGGCGGCAGCGGTGGTGGTGGTGGAGGAGGAGGGCCA
TGTGGTGCTTGTAAATTTTTGAGAAGAAAGTGTGTTGCCGGTTGCATATTTGCACCTTAT
TTTGATTCAGAACAAGGTGCAGCACATTTTGCAGCTGTACACAAAGTGTTTGGAGCTAGT
AATGTTTCTAAACTTCTCCTTCATATTCCTGTCCACAAAAGGCTTGATGCGGTTCTCACC
ATTTGTTTTGAAGCTCAAGCAAGACTCCGAGACCCCGTCTACGGTTGCGTTGCTCATATC
TTTGCTCTTCAACATCAGGTAGCAAATTTACAAGCAGAACTCTCATACTTACAAGCCCAC
CTAACAACCCTGGAGCTTCCAACACCGCCGCCACTGCCGCCACCGCCACCGCCACCGCCA
CAACAACCTCAAACAATGCTCCACCAGCCATCACTCACCATAGCAGACTTGCCAACAGCA
GGACCTTCATTGCCAGCTGCCTATGACTTATCATCACTTTTTGACCCAATGGTTATTCAA
CCCTCATGGGCAATGCAGCAGCAGCCACGACCGCCGCCCCCTCTGCCTCTGGACCCGCGC
CACTTTGGTGGCGCTAGAGCTCCGATGGACATGTCACCATCCACCGGAGGCGGGGGCGGC
GATCTTCAAGAATTGGCACGTGAACTTCTGCATAGACATGGATCAGCAACAGTGCCATGC
ACAGAATCATCAGCTTTGCCACCACAGACCAAGTGA

Peptide Sequence

PEP ID

Solyc01g091420.2.1
PEP Infomation

LOB domain-containing protein, putative (AHRD V3.3 *** B9RDE1_RICCO)
Sequence

MSSNNHSSSTGGVSAPGGGVTSGSTSSGGGSGGGGGGGGPCGACKFLRRKCVAGCIFAPY
FDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVLTICFEAQARLRDPVYGCVAHI
FALQHQVANLQAELSYLQAHLTTLELPTPPPLPPPPPPPPQQPQTMLHQPSLTIADLPTA
GPSLPAAYDLSSLFDPMVIQPSWAMQQQPRPPPPLPLDPRHFGGARAPMDMSPSTGGGGG
DLQELARELLHRHGSATVPCTESSALPPQTK*

Transcript Sequence

Transcript ID

Solyc01g091420.2.1
Transcript Infomation

LOB domain-containing protein, putative (AHRD V3.3 *** B9RDE1_RICCO)
Sequence

TTTATTCTCTACAAAATACAAACAAACCCCTTCAAAATTATGTTCCAAAAGTGGTGAATT
TGAATTATCATTGAAAATGAGCTCAAATAACCATAGTAGTAGCACCGGTGGTGTCTCCGC
CCCAGGCGGAGGAGTGACTAGTGGAAGTACTAGTAGTGGAGGCGGCAGCGGTGGTGGTGG
TGGAGGAGGAGGGCCATGTGGTGCTTGTAAATTTTTGAGAAGAAAGTGTGTTGCCGGTTG
CATATTTGCACCTTATTTTGATTCAGAACAAGGTGCAGCACATTTTGCAGCTGTACACAA
AGTGTTTGGAGCTAGTAATGTTTCTAAACTTCTCCTTCATATTCCTGTCCACAAAAGGCT
TGATGCGGTTCTCACCATTTGTTTTGAAGCTCAAGCAAGACTCCGAGACCCCGTCTACGG
TTGCGTTGCTCATATCTTTGCTCTTCAACATCAGGTAGCAAATTTACAAGCAGAACTCTC
ATACTTACAAGCCCACCTAACAACCCTGGAGCTTCCAACACCGCCGCCACTGCCGCCACC
GCCACCGCCACCGCCACAACAACCTCAAACAATGCTCCACCAGCCATCACTCACCATAGC
AGACTTGCCAACAGCAGGACCTTCATTGCCAGCTGCCTATGACTTATCATCACTTTTTGA
CCCAATGGTTATTCAACCCTCATGGGCAATGCAGCAGCAGCCACGACCGCCGCCCCCTCT
GCCTCTGGACCCGCGCCACTTTGGTGGCGCTAGAGCTCCGATGGACATGTCACCATCCAC
CGGAGGCGGGGGCGGCGATCTTCAAGAATTGGCACGTGAACTTCTGCATAGACATGGATC
AGCAACAGTGCCATGCACAGAATCATCAGCTTTGCCACCACAGACCAAGTGAGATCCAAA
AGTACTGACTTATAATATGTTAAATATTAGTGGTACTCATGAG