Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g091350.3.1
CDS Infomation	ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *** K4AZ75_SOLLC)
Sequence	ATGGCTCGTAATAAGGAAGCGTTGGTATTGGTAATTGATGTGGGTCCTTCCATGCACTCG GTTTTACCTGAGATTGAAAAAGTTTGCTCATTGTTGATACAGAAGAAGCTGGTTTTCAGC AGATATGATGAAGTGGGGTTTGTCTTGTTTGGAACTGCAGACACCAAGAATGAATTGAAA GAGGAAATAGGAGGATATGAACACGTGACAGTTCTGCGAAATATCAAAGTTGTAGATGAA GATCTTGTTGATGCTCTGCAAAAACTTCCACGAGGAAGTGTTCCTGGAGATTGTATCCTC TATAATTACTGGGTTGTGATAGTTCAGACTAGTTCAGTTGTTAAGCATGCAATCCTTGTT CAAGTCACTGTCCTTCTTGATGCGATTGTTGTTGGTACGGACATGCTCATTAAGTTTGGA CGAACCAACAAGGCAAAGAGACGTCTTTGCCTTATTACAAATGCTGTTTCTCGCATCAAA GATCCATTTGAAGGAACAAAGGAAGATCAAGTAAACACCATTGCTACCCAGATGACAGCA CAAGGCATTAAGATGGACTGTGTAATTGTCAGAATGAAACAAGATCGGGAAACAAATAGG AGCATTATGGAAGAAAATGATTTTTTAATGTCAGTATTCTCGAACAAATCTTCCTCAAAA GTAGTATATGTGGAAAGTCCAACTTCTTTATTAGGTGCACTTAGAACTCGTAATATATCG CCAGTCACGATATACAGAGGTGATCTTGAAATTAGTGCACAATTGAAGATCAAGGTGTGG GTTTACAAGAAAACATCTGAAGAGAAGTTTCCTACCCTGAAAAAGTACTCCGAAAGGACT CCTACCACTGATAAATTTGGTGCTCATGACATCAAGGTTGAATACGAAAATAAAATCATA GAAGACCCTAATAAAGTTGTGCCACCAGAACAGAGGATTAAAGGTTTTCAGTATGGACCT CAAGTAGTTCCTATATCCTCTGCTGAGTTGGAGGCTGTAAAGTTCAAACCGGAGAAAAGT GTGAAGCTACTAGGATTCACAGATTCTTCAAACATAATGCGGCATTACTACCTGAAAGAT GTAAATATCTTCATAGCCGAACCTGGCAACAAAAATGCCATCCTTGCACTTTCTGCTTTG GCAAGGGCAATGAAGGAAATGAACAAAGTAGCAATCGTCCGATGTGTATGGAGGCAAGGC CAAGGTAATGTTGTTGTTGGGGTCCTTACACCAAATGTCTCTGACAAGGATAATACTCCT GATTCATTTTACTTCAATATTCTTCCCTTTGCTGAGGATGTTCGGGATTTCCAGTTTCCT TCTTTCAGCAATTTACCTTCATCAATGCAGCCAAATGAAAAGCAACAAGACGCAGCAGAT AAATTGGTTCAGATGTTGGATCTTGCACCACCTGGAAAACAGGAAGTGTTATCACCTGAC TTCACACCTAATCCTGTTCTAGAGCGTTACTACCGCTATCTTAACCTGAAGTCAAAGCAC CCAGATGCAGCTGTTCCTCCACTTGATGAAACCCTCAGAAAGATAACAGAACCTGATGTT GAACTTCTTTCTCAAAACAAGTCCATCATAGAGGAACTCCGTAGGTCTTTTGAACTAAAA GATAATCCAAAGCTGAAAAAATCAGCAAGAAGAATAAAAGAGAGACCTTCAGGATCAGAT GAGGAGATAGAAGAATTCAACAAAGATGCTGATGTCAAAGCTATAGACTCCATGGAATAC TCAGCCAAAACAGAAGTTGAGAAAGTTGGAGATGTTAATCCTGTCAAAGACTTTGAGGAT ATGCTGTCTCGAAGAGATAATCCAAAATGGATTAGTAAGGCCATTCAGGATATGAAAAAT AGGATCTTTGATCTCGTCGAAAATTCTTGTGACGGAGATACATTTCATAAAGCATTGCAA TGTTTGGTGGCTCTACGCAAAGGTTGCATCCTTGAGCAGGAACCAAAGCAGTTCAATGAT TTCCTGTGCCACCTATCTAAATTTTGCCAAGAAAAAGACCTGAGAAGTTTCTGTCTATAT CTCACATCTCATGAAATCACTTTGATAACCAAGGCAGAAGCTCCAGACAGTGAAATTTCA GAACATGAGGCTAGAAGCTTTATGGTCAAGCCTGAACTTGACTCGCAAAATATGAAATCA GAGGCTAAAGCAGAGGATGATATTATGAGTATATACCTGGGAGGGAAGTAG

Peptide Sequence

PEP ID	Solyc01g091350.3.1
PEP Infomation	ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *** K4AZ75_SOLLC)
Sequence	MARNKEALVLVIDVGPSMHSVLPEIEKVCSLLIQKKLVFSRYDEVGFVLFGTADTKNELK EEIGGYEHVTVLRNIKVVDEDLVDALQKLPRGSVPGDCILYNYWVVIVQTSSVVKHAILV QVTVLLDAIVVGTDMLIKFGRTNKAKRRLCLITNAVSRIKDPFEGTKEDQVNTIATQMTA QGIKMDCVIVRMKQDRETNRSIMEENDFLMSVFSNKSSSKVVYVESPTSLLGALRTRNIS PVTIYRGDLEISAQLKIKVWVYKKTSEEKFPTLKKYSERTPTTDKFGAHDIKVEYENKII EDPNKVVPPEQRIKGFQYGPQVVPISSAELEAVKFKPEKSVKLLGFTDSSNIMRHYYLKD VNIFIAEPGNKNAILALSALARAMKEMNKVAIVRCVWRQGQGNVVVGVLTPNVSDKDNTP DSFYFNILPFAEDVRDFQFPSFSNLPSSMQPNEKQQDAADKLVQMLDLAPPGKQEVLSPD FTPNPVLERYYRYLNLKSKHPDAAVPPLDETLRKITEPDVELLSQNKSIIEELRRSFELK DNPKLKKSARRIKERPSGSDEEIEEFNKDADVKAIDSMEYSAKTEVEKVGDVNPVKDFED MLSRRDNPKWISKAIQDMKNRIFDLVENSCDGDTFHKALQCLVALRKGCILEQEPKQFND FLCHLSKFCQEKDLRSFCLYLTSHEITLITKAEAPDSEISEHEARSFMVKPELDSQNMKS EAKAEDDIMSIYLGGK*

Transcript Sequence

Transcript ID	Solyc01g091350.3.1
Transcript Infomation	ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *** K4AZ75_SOLLC)
Sequence	ATGGCTCGTAATAAGGAAGCGTTGGTATTGGTAATTGATGTGGGTCCTTCCATGCACTCG GTTTTACCTGAGATTGAAAAAGTTTGCTCATTGTTGATACAGAAGAAGCTGGTTTTCAGC AGATATGATGAAGTGGGGTTTGTCTTGTTTGGAACTGCAGACACCAAGAATGAATTGAAA GAGGAAATAGGAGGATATGAACACGTGACAGTTCTGCGAAATATCAAAGTTGTAGATGAA GATCTTGTTGATGCTCTGCAAAAACTTCCACGAGGAAGTGTTCCTGGAGATTGTATCCTC TATAATTACTGGGTTGTGATAGTTCAGACTAGTTCAGTTGTTAAGCATGCAATCCTTGTT CAAGTCACTGTCCTTCTTGATGCGATTGTTGTTGGTACGGACATGCTCATTAAGTTTGGA CGAACCAACAAGGCAAAGAGACGTCTTTGCCTTATTACAAATGCTGTTTCTCGCATCAAA GATCCATTTGAAGGAACAAAGGAAGATCAAGTAAACACCATTGCTACCCAGATGACAGCA CAAGGCATTAAGATGGACTGTGTAATTGTCAGAATGAAACAAGATCGGGAAACAAATAGG AGCATTATGGAAGAAAATGATTTTTTAATGTCAGTATTCTCGAACAAATCTTCCTCAAAA GTAGTATATGTGGAAAGTCCAACTTCTTTATTAGGTGCACTTAGAACTCGTAATATATCG CCAGTCACGATATACAGAGGTGATCTTGAAATTAGTGCACAATTGAAGATCAAGGTGTGG GTTTACAAGAAAACATCTGAAGAGAAGTTTCCTACCCTGAAAAAGTACTCCGAAAGGACT CCTACCACTGATAAATTTGGTGCTCATGACATCAAGGTTGAATACGAAAATAAAATCATA GAAGACCCTAATAAAGTTGTGCCACCAGAACAGAGGATTAAAGGTTTTCAGTATGGACCT CAAGTAGTTCCTATATCCTCTGCTGAGTTGGAGGCTGTAAAGTTCAAACCGGAGAAAAGT GTGAAGCTACTAGGATTCACAGATTCTTCAAACATAATGCGGCATTACTACCTGAAAGAT GTAAATATCTTCATAGCCGAACCTGGCAACAAAAATGCCATCCTTGCACTTTCTGCTTTG GCAAGGGCAATGAAGGAAATGAACAAAGTAGCAATCGTCCGATGTGTATGGAGGCAAGGC CAAGGTAATGTTGTTGTTGGGGTCCTTACACCAAATGTCTCTGACAAGGATAATACTCCT GATTCATTTTACTTCAATATTCTTCCCTTTGCTGAGGATGTTCGGGATTTCCAGTTTCCT TCTTTCAGCAATTTACCTTCATCAATGCAGCCAAATGAAAAGCAACAAGACGCAGCAGAT AAATTGGTTCAGATGTTGGATCTTGCACCACCTGGAAAACAGGAAGTGTTATCACCTGAC TTCACACCTAATCCTGTTCTAGAGCGTTACTACCGCTATCTTAACCTGAAGTCAAAGCAC CCAGATGCAGCTGTTCCTCCACTTGATGAAACCCTCAGAAAGATAACAGAACCTGATGTT GAACTTCTTTCTCAAAACAAGTCCATCATAGAGGAACTCCGTAGGTCTTTTGAACTAAAA GATAATCCAAAGCTGAAAAAATCAGCAAGAAGAATAAAAGAGAGACCTTCAGGATCAGAT GAGGAGATAGAAGAATTCAACAAAGATGCTGATGTCAAAGCTATAGACTCCATGGAATAC TCAGCCAAAACAGAAGTTGAGAAAGTTGGAGATGTTAATCCTGTCAAAGACTTTGAGGAT ATGCTGTCTCGAAGAGATAATCCAAAATGGATTAGTAAGGCCATTCAGGATATGAAAAAT AGGATCTTTGATCTCGTCGAAAATTCTTGTGACGGAGATACATTTCATAAAGCATTGCAA TGTTTGGTGGCTCTACGCAAAGGTTGCATCCTTGAGCAGGAACCAAAGCAGTTCAATGAT TTCCTGTGCCACCTATCTAAATTTTGCCAAGAAAAAGACCTGAGAAGTTTCTGTCTATAT CTCACATCTCATGAAATCACTTTGATAACCAAGGCAGAAGCTCCAGACAGTGAAATTTCA GAACATGAGGCTAGAAGCTTTATGGTCAAGCCTGAACTTGACTCGCAAAATATGAAATCA GAGGCTAAAGCAGAGGATGATATTATGAGTATATACCTGGGAGGGAAGTAGAAAAGGAAA CCCAGATAGATATGCATATTGTGTGATGTACAGGCAATCAGCATTTTCGGCAAGAATGAT AATGTAGACTTGAAAAGATCTTTTTTTGAGGCTTCTGCTAAAGATTGTATCTTAGACCTC AATCAGCCTCATTATGTTACTCCATCCTCAAGTTGTTTGTTTGGTCATTCAAAGGCTTCT CTTTTATTTGCTTATCTTTGTCATGTCTAAACCTATTCTATAGATGTCTCTATGTCCATG CCTGTTGCTAGCAGGGTGGTAGGTATTAAGAAGGTATAACTTATGCAGTAAAGTGTTGCC TAGTACTATATTACACGTCTTTTGTTGACTCCTAAACAACTGGCAATGAGCGTACTTGCA GCAATTGAAGCTTATTTCAACTAGAAACTCCTCTCAACTGGCTTAAAGCGAATGGAACAT TGTTTTTCTGATTGTGTCAAAACACAAAAACAGAAAAGGAACAATGTAATACTATGTCTC CCGTTGTACAAATAGAAAACTGTTTTAGGGATCCCTTGATTTACAATCTAGTTAATGATA TTTGAGATTGTTAAAAGGATGAACAATAGCTGATGCTACTTATAATAACACTCGACTATT ATACAGGAAGTTTCTTGGAGGAAATATTTCCCAATTAAGTTATGAAAAATATTCTCTAAG AAAAATAAGTTAAGTTACATAAGTAGCGTTGCACACCCCTACCCTCCACTCACAACCCTA TGCAACAACTTTTGGGAAATGTTTTCTTACTTGCCAACCACTTAAAATTACGACAGAAAA AGCATTTATTTTACATGAATAACATTTTTCTTAATGCTAAACATACTAAACGTGAGTTTA TACTGGAAATTCAACACTATAAAATGTATTATCCTTCAATGCATACGATCTCTAGGTATG CAAAAATCCATTCACAGTATATTTTTCTATTAGAGAATCATGAACAGAGCCAGGTATGCA AAAATCCCCACCTGGAAAGGTTGGAGGCTGGCTTGTCCTACTTTCCTTTTCTTTCAACGC TTACAAAGTACAACACAAAATTATGAAAAGTTTGCCTTTTAAGCATTAGCCACTCCATCC TGGTAATGAAGAAAGTGCCCCAAGTTTCTATCTCTCTGTCTGAATCCTGCCTCAGCGCCA ATGTCAATAGACAGTTCAAGTCTCAAATTTCAAGAGGAAAAGATAAGTTCTGCATAGGTG ACTTTCCTTCCAGGAATGATAAGTTAAGCTGAATTACCCACGGACTCCAATCAATTCAAT ATCAAACACCAACCATGAGTTTGGTGGGATATTCTCCCCAGCTCCCTCACTGCCGTAGCT GCAAAAAAGAGAAATAGCAAGAATTGAGCAAAGTTGGAAAAGGAAGTTACATGTGCATTC AGTAGCAGAGTCGAGGATTCTGGAGGAAGGAACTCATACTGGGAAAGTAATGAAGGGAAA AGTTAAAAGGAGAGGAAGGATTGAGGGGAAGCAGGGAGAGGAATCTTGTGTCTTCAAATA AATTCAGAACATGAATATGCAGCATACCCTATTGATGGTGGGACTGTGAGCCTTCTTTTA TCACCCACACGCATGCCTGTTATGGAAAACACAATATTATATTAGCAGCTGCAGCAATTA AAGAAAAGAATTACAGACATATCAAATCTACTCATCGCCATCTTTACCAGCAAGACCAAG GTTCCATCCCTCTATGACGTCTTTATCACCTTCAAACAAGAAAAAGGAAAAATCTGAGTT CAAAAGTCCATTAAAACAAAATGAATTCTTCCAAGAGTCCTGTGAATACCTAGACGAAAT TTATATGGAGATTTTCCCATATTTGTGTAAAATATCTGCCCATTCTCCTTTAGCTTGCCG GTGTAATGAACTTTGATCTGTGCAACAGTTCGAACATCAAAAAAAAAATGAGACTCTATT TTTCTTGAGGTAAAGTCGCCTCAATTCATAGTTCAAGATATCTATAAATTCTCAACTAAA TTACCTTCTTTCCCGGAGCGGCCAATTTTCCACCAGGTTCACCCACAGCGAGCTCTTCAA TGGTCAACCCATTAGACAAGGTCCTTATTACAGTAGACTTGACCTTCAGACTCTTGTCCT CAACATCCACGGGTTGTCTATTCATTTCATTCTCTTGCAGAACAGGAAGATCCTTGTTTA CCAAACAGTCGTCCTGAGATTTCGTCTTCTTTTTCT