Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g091190.3.1
CDS Infomation

5-enolpyruvylshikimate-3-phosphate synthase
Sequence

ATGGCACAGATTAGTAGCATGGCACAAGGGATACAGACCCTTAGTCTGAATTCCTCCAAT
CTTTCTAAAACACAAAAGGGTCCTCTTGTTTCAAATTCTCTCTTCTTTGGATCAAAGAAA
GTAACCCAAATTTCAGCAAAATCATTAGGGGTGTTTAAGAAAGATTCAGTTTTGAGGGTG
GTGAGGAAGTCATCTTTTAGGATTTCTGCATCAGTGGCTACTGCAGAGAAACCCCATGAG
ATTGTGCTAGAACCCATCAAAGATATATCTGGTACTGTTAAATTACCCGGTTCGAAATCC
CTTTCCAATCGTATTCTCCTTCTTGCTGCCCTTTCTGAGGGAAGGACTGTTGTTGACAAT
TTACTGAGTAGTGACGACATTCATTACATGCTTGGTGCGTTGAAAACACTTGGACTTCAT
GTTGAAGATGACAATGAAAACCAACGAGCAATTGTGGAAGGTTGTGGTGGGCAGTTTCCT
GTCGGTAAAAAGTCTGAGGAAGAAATCCAACTATTCCTTGGAAATGCAGGAACAGCAATG
CGTCCGTTGACAGCAGCAGTTACTGTAGCTGGAGGACATTCAAGATATGTTCTTGATGGA
GTTCCTAGGATGAGAGAGAGACCAATTGGTGATTTGGTTGATGGTCTTAAGCAGCTTGGC
GCAGAGGTAGATTGTTCCCTTGGTACGAATTGTCCCCCAGTTCGAATTGTCAGCAAGGGA
GGTCTTCCAGGAGGGAAGGTAAAGCTCTCTGGATCCATCAGCAGCCAATACCTGACTGCT
CTGCTTATGGCTGCTCCCCTGGCTCTAGGAGATGTGGAGATTGAAATAATTGACAAACTG
ATATCTGTGCCTTATGTTGAAATGACACTGAAGTTGATGGAGCGATTTGGTGTCTTTGTG
GAGCACAGTAGTGGCTGGGACAGATTCTTGGTAAAAGGAGGTCAGAAGTACAAATCTCCT
GGGAAAGCATTTGTTGAAGGAGATGCCTCAAGTGCTAGCTATTTTTTGGCGGGGGCAGCA
GTCACAGGTGGAACCGTCACTGTTGAAGGTTGTGGAACAAGCAGTTTACAGGGAGATGTT
AAGTTCGCTGAGGTCCTCGAGAAGATGGGGGCAGAAGTTACATGGACAGAGAACAGTGTC
ACAGTTAAAGGACCTCCGAGGAACTCTTCTGGAATGAAACATTTGCGTGCCATTGACGTG
AACATGAACAAAATGCCAGATGTGGCCATGACTCTTGCCGTAGTTGCACTTTTTGCTGAT
GGTCCTACTACCATAAGAGACGTTGCTAGCTGGAGAGTAAAGGAAACTGAGCGGATGATT
GCCATATGCACCGAACTTAGGAAGTTGGGTGCAACAGTTGTTGAAGGGTCAGACTACTGC
ATAATCACCCCACCAGAAAAGTTAAACGTAACGGAGATTGATACATATGATGACCACAGA
ATGGCTATGGCTTTCTCTCTTGCTGCTTGTGCTGATGTTCCAGTCACTATTAAGGACCCT
GGCTGTACTCGCAAAACCTTCCCCGACTACTTCGAGGTTCTCCAGAAGTACTCTAAGCAC
TAA

Peptide Sequence

PEP ID

Solyc01g091190.3.1
PEP Infomation

5-enolpyruvylshikimate-3-phosphate synthase
Sequence

MAQISSMAQGIQTLSLNSSNLSKTQKGPLVSNSLFFGSKKVTQISAKSLGVFKKDSVLRV
VRKSSFRISASVATAEKPHEIVLEPIKDISGTVKLPGSKSLSNRILLLAALSEGRTVVDN
LLSSDDIHYMLGALKTLGLHVEDDNENQRAIVEGCGGQFPVGKKSEEEIQLFLGNAGTAM
RPLTAAVTVAGGHSRYVLDGVPRMRERPIGDLVDGLKQLGAEVDCSLGTNCPPVRIVSKG
GLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVFV
EHSSGWDRFLVKGGQKYKSPGKAFVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQGDV
KFAEVLEKMGAEVTWTENSVTVKGPPRNSSGMKHLRAIDVNMNKMPDVAMTLAVVALFAD
GPTTIRDVASWRVKETERMIAICTELRKLGATVVEGSDYCIITPPEKLNVTEIDTYDDHR
MAMAFSLAACADVPVTIKDPGCTRKTFPDYFEVLQKYSKH*

Transcript Sequence

Transcript ID

Solyc01g091190.3.1
Transcript Infomation

5-enolpyruvylshikimate-3-phosphate synthase
Sequence

ATATTTTTTTGCAAAATAAGTAGTAATATAATCAGAAATAGACAAAATTCATAGAAGCAG
ATGTCTGTTGTGAAAAATTAAGGGATGCATTTTGCAAATTGTGACAATTCAGTCAAATGC
ACAACTACCCTCAAACCTCAACAACTCTTGATGGCTTTTGAAGAAAAGAATTCAGAGACA
AAAGGTGGTTGGTGAAGCTGACATTGGACTCCATTCTGCTTAATTGCCTAACCCCATCTC
CCTTCAATCTACCTACCATAACCATTTTCTTCAAAATTTTCTCAAAAAAACAATTTGGTC
TTCAAACAACTCCAAGAACACAGAGAGAGAGTGGAAAAACTGAAGTTTTTCACAAGAAAT
GGCACAGATTAGTAGCATGGCACAAGGGATACAGACCCTTAGTCTGAATTCCTCCAATCT
TTCTAAAACACAAAAGGGTCCTCTTGTTTCAAATTCTCTCTTCTTTGGATCAAAGAAAGT
AACCCAAATTTCAGCAAAATCATTAGGGGTGTTTAAGAAAGATTCAGTTTTGAGGGTGGT
GAGGAAGTCATCTTTTAGGATTTCTGCATCAGTGGCTACTGCAGAGAAACCCCATGAGAT
TGTGCTAGAACCCATCAAAGATATATCTGGTACTGTTAAATTACCCGGTTCGAAATCCCT
TTCCAATCGTATTCTCCTTCTTGCTGCCCTTTCTGAGGGAAGGACTGTTGTTGACAATTT
ACTGAGTAGTGACGACATTCATTACATGCTTGGTGCGTTGAAAACACTTGGACTTCATGT
TGAAGATGACAATGAAAACCAACGAGCAATTGTGGAAGGTTGTGGTGGGCAGTTTCCTGT
CGGTAAAAAGTCTGAGGAAGAAATCCAACTATTCCTTGGAAATGCAGGAACAGCAATGCG
TCCGTTGACAGCAGCAGTTACTGTAGCTGGAGGACATTCAAGATATGTTCTTGATGGAGT
TCCTAGGATGAGAGAGAGACCAATTGGTGATTTGGTTGATGGTCTTAAGCAGCTTGGCGC
AGAGGTAGATTGTTCCCTTGGTACGAATTGTCCCCCAGTTCGAATTGTCAGCAAGGGAGG
TCTTCCAGGAGGGAAGGTAAAGCTCTCTGGATCCATCAGCAGCCAATACCTGACTGCTCT
GCTTATGGCTGCTCCCCTGGCTCTAGGAGATGTGGAGATTGAAATAATTGACAAACTGAT
ATCTGTGCCTTATGTTGAAATGACACTGAAGTTGATGGAGCGATTTGGTGTCTTTGTGGA
GCACAGTAGTGGCTGGGACAGATTCTTGGTAAAAGGAGGTCAGAAGTACAAATCTCCTGG
GAAAGCATTTGTTGAAGGAGATGCCTCAAGTGCTAGCTATTTTTTGGCGGGGGCAGCAGT
CACAGGTGGAACCGTCACTGTTGAAGGTTGTGGAACAAGCAGTTTACAGGGAGATGTTAA
GTTCGCTGAGGTCCTCGAGAAGATGGGGGCAGAAGTTACATGGACAGAGAACAGTGTCAC
AGTTAAAGGACCTCCGAGGAACTCTTCTGGAATGAAACATTTGCGTGCCATTGACGTGAA
CATGAACAAAATGCCAGATGTGGCCATGACTCTTGCCGTAGTTGCACTTTTTGCTGATGG
TCCTACTACCATAAGAGACGTTGCTAGCTGGAGAGTAAAGGAAACTGAGCGGATGATTGC
CATATGCACCGAACTTAGGAAGTTGGGTGCAACAGTTGTTGAAGGGTCAGACTACTGCAT
AATCACCCCACCAGAAAAGTTAAACGTAACGGAGATTGATACATATGATGACCACAGAAT
GGCTATGGCTTTCTCTCTTGCTGCTTGTGCTGATGTTCCAGTCACTATTAAGGACCCTGG
CTGTACTCGCAAAACCTTCCCCGACTACTTCGAGGTTCTCCAGAAGTACTCTAAGCACTA
AACCACTTCACATGTAGAAGGAATTATTTTGTACTACAAGAGAAATTATGCACCAGTTTG
CAACCAAAATGGTGCCCATACCGGAAGAGAAAAAAGCTTTCCAACTCCTTTTTATATGTC
TATGTGAGATCATGTTCATTGTATTTGTTGAAGTTGAGCTTCTTTTTTTGTTTCTCGTGT
AGAAGACATGTATACTATATAGTTAAGTACACTTCCTTGAAGAATATTTACCATTGATTA
TCACCGTTTTAGTTATTGCATTTTGGTATTCAAAATAAATTTGTTTCGAGGATTAAAGCT
ATTATTGTGATTTATAGAGCTAAGATAGGCCATTAGTCTATATATTTTCACTTATTAAAG
TTCATGATTACATAAGATGATTATGTTTATTTGGTACGGTGAAATTAAGAATAAACTACC
TAATTCCTACCATATGTATTATTTTTCCAATAGTTTGTCTAATTATTAGTTTTATGACAA