Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g090920.3.1
CDS Infomation

Calmodulin, putative (AHRD V3.3 *** B9RD69_RICCO)
Sequence

ATGGAAAAATCAAATGTCTCGGACTCAGAAACTGAAGAGAGAAACTCAGATTCAAGCTCA
GACTCAGAGGAGTCTCCGGCGGAGCCCCAAAGAACAGGAAAACTCACTGATTATGAGAAA
CAGAGAATGAAGAGAATCGAAGAAAACAGAGCAAGAATGGAGGCTATGGGTCTGCACAAA
ATGGCAACTTCTTTGATGGGTTCTTCCCCAAAACCCCAGAAGAAAGGCAAGGACAGAAAG
GGAAAAAAGAAAGTGGCTGATGAAGATGAAGATTACGATCCAGTTCAAAGTGAGGACCTT
TCTTGTGATACAGGTGAAGAGGATGATGGGGACTTTGAAGTTTCAAAGTCCCAATTGAAA
AAGTCAAAGAAAAAAATTCAAACAACTAAGAAGAGAGTGTCTAACACAATGGATTTTGTC
AACGATGATGTCACAATGGATTTTGTCGACGATGACGTCGCCTTAATGCAGGCTATTGCT
TTGTCACTACAAGATTCAGCAGGTTTTCTGAATCTTGCAAATAAAGTGCCTATGCAAGGC
ACTGATGCAGATTCCACTAATAAGTACAGCAACGGAAAAGCTTCCTTGAAAAAGGTCAGC
AATGAAAAAGCTTCTTCAAAAGAGGCCAGTAATGAAAAGGAGGTAGGTACCTGCAATCAG
GAAGATGTTACTGGGAAAAGGAAGAGAAAACAACAGACAAGAAATCGAGTGCAGATGACT
GAGGATGACTTGATTATGCATTTCTTTCAGTTTGATGAAGCTGGAAAAGGGAGTATAAAT
TTTAGAGATCTACAGAAAATGGTAGTTTCCCATGATTTTACATGGTCAGATGAAGACATG
GCAAATATGATTCGTTGTTTTGATTCTAATGGAGACGGAAAGTTGAGCCTGGATGATTTT
CGCAAGATTGTGGTCAGATGTAATATGATACAAGGTTCTGAAGATGCATCCAAAGAGTAG

Peptide Sequence

PEP ID

Solyc01g090920.3.1
PEP Infomation

Calmodulin, putative (AHRD V3.3 *** B9RD69_RICCO)
Sequence

MEKSNVSDSETEERNSDSSSDSEESPAEPQRTGKLTDYEKQRMKRIEENRARMEAMGLHK
MATSLMGSSPKPQKKGKDRKGKKKVADEDEDYDPVQSEDLSCDTGEEDDGDFEVSKSQLK
KSKKKIQTTKKRVSNTMDFVNDDVTMDFVDDDVALMQAIALSLQDSAGFLNLANKVPMQG
TDADSTNKYSNGKASLKKVSNEKASSKEASNEKEVGTCNQEDVTGKRKRKQQTRNRVQMT
EDDLIMHFFQFDEAGKGSINFRDLQKMVVSHDFTWSDEDMANMIRCFDSNGDGKLSLDDF
RKIVVRCNMIQGSEDASKE*

Transcript Sequence

Transcript ID

Solyc01g090920.3.1
Transcript Infomation

Calmodulin, putative (AHRD V3.3 *** B9RD69_RICCO)
Sequence

CATTTGATTTTTCTTTTTCCTTCTATTCGCGGATTAGCCACTGTTACAACCCTTGTGCAG
TTCCCGCGTTTACGAGACAGCAATCCTTCGAATCCAATTGAAAATCCCAAACTATACTCT
TGAAAATGGAAAAATCAAATGTCTCGGACTCAGAAACTGAAGAGAGAAACTCAGATTCAA
GCTCAGACTCAGAGGAGTCTCCGGCGGAGCCCCAAAGAACAGGAAAACTCACTGATTATG
AGAAACAGAGAATGAAGAGAATCGAAGAAAACAGAGCAAGAATGGAGGCTATGGGTCTGC
ACAAAATGGCAACTTCTTTGATGGGTTCTTCCCCAAAACCCCAGAAGAAAGGCAAGGACA
GAAAGGGAAAAAAGAAAGTGGCTGATGAAGATGAAGATTACGATCCAGTTCAAAGTGAGG
ACCTTTCTTGTGATACAGGTGAAGAGGATGATGGGGACTTTGAAGTTTCAAAGTCCCAAT
TGAAAAAGTCAAAGAAAAAAATTCAAACAACTAAGAAGAGAGTGTCTAACACAATGGATT
TTGTCAACGATGATGTCACAATGGATTTTGTCGACGATGACGTCGCCTTAATGCAGGCTA
TTGCTTTGTCACTACAAGATTCAGCAGGTTTTCTGAATCTTGCAAATAAAGTGCCTATGC
AAGGCACTGATGCAGATTCCACTAATAAGTACAGCAACGGAAAAGCTTCCTTGAAAAAGG
TCAGCAATGAAAAAGCTTCTTCAAAAGAGGCCAGTAATGAAAAGGAGGTAGGTACCTGCA
ATCAGGAAGATGTTACTGGGAAAAGGAAGAGAAAACAACAGACAAGAAATCGAGTGCAGA
TGACTGAGGATGACTTGATTATGCATTTCTTTCAGTTTGATGAAGCTGGAAAAGGGAGTA
TAAATTTTAGAGATCTACAGAAAATGGTAGTTTCCCATGATTTTACATGGTCAGATGAAG
ACATGGCAAATATGATTCGTTGTTTTGATTCTAATGGAGACGGAAAGTTGAGCCTGGATG
ATTTTCGCAAGATTGTGGTCAGATGTAATATGATACAAGGTTCTGAAGATGCATCCAAAG
AGTAGTTAAATCTTCTTAAGAAATAGAGGACTATGCCATATTGTACATGACTAGCCAAGA
AGTTGACAGCGTGAAATAGAAGGGATCTTTTCTATAACTTTATAAATCAGCCGGGAATTA
TACTTCTATGACGGTTTCGGGCGGAGCAGCAGCGGTTTCCCGGCGACGGAAGTGGGCGAG
GATCTCGAGGAGATGGTTAAAGTGATGCCAAGTAAGAAACGTGGGATAGTGTCGTTTGAC
TGACTTCCGTGCTGGTTATGTTTAAATTCGGTAAAAAAGCAATGTTACCGATGCCAAAGG
TCCAGTGGATTAGCATTAGAAAGCGAAGACAAAAGGATTTTTGCGACACAGCCAAAATTA
GAAGATTCGGCTGCGGTGGGTGTTGAGGGGAGCAAGAACACCTCTATGAGAATTATACCT
TTCACAGTTTATGCAGCAGGCAAACAGCACAATGTCCATATGTAGACAGAATCTGCAAGC
ATCTTTCAATAAACAATTATCTAGATGTATAAGCTTTTTTACTGTTTCTTCTCTGGTATC
ATACATCATTGTTGTAATCTCTGAAGGCCAACTTCTTATGTATAACATTACAATAACAAG
GAATGGAAAGAAAAGAGGGAAGTGTGTAATAACTGAATTACATATACAGCCATTTTCTTT
AAACCCGGAAATGAAGTTATATCATTTGGACCTAATCGGCGCTGGGCAAGGCATGCAGAT
GTTTCTGATGAGCCCGAGCAGTGAAACCAGCATACCAAGCGACTCTCATGAGCTGCATGC
CAAGAATGAGAACCCACCAACAGACTAGCCCCCTAATGGTATGCAGCATCCATGATGGTG
CATTGAGTTCTGCACTGAGCTTTAACCCCCTCATTAGTTGTAAAACACGATACGCTTCAT
AGACTACTGGGGTCACCAACCATACTGGTGACTTCCAATGCCATGTCAGCATCTCTGTGA
GTATCTGTATAGATAGAAGCAGAAGATAGGGACCCAAGAGCACAGCATAAGAAATGAAAG
GAAGTTGAGGCTGAAGGAAACTGTTCTGAGAAGCAAAATATACTACCAAGGGAATGACTA
GACCCATAATGTTCGCGACCATGTTCCATAACTGATAACCGAAAGGCGGCTTGCTGGTGG
AATCTTCACTGGTGTCTGGTGAGCGAGCACAAGAATCAGCTAACAGAAGAAATAGGTTTG
CTCCGAGATTGTAAATACAATCAAGTCCAGTCAAGGAAAGAAGGCTGGCTATGTTGGGAC
CAATGAAAACTGATGAAATAGGTAACCACAAAGTGGGCACCATCCCAGTGGCTAAGAGAA
TGGCAGGGCCAAGAAGCCACACAGGCCATTGAAGGTATTGAAGCTGCATTAGTGGCTGGT
TTTTTGCATCAGTGAGCCCTTCAGCCTCAGTTAATGTAGATTCAGATGGTTTACTGGAAG
ACATGGTTTCAAATATATTGCTTGACCCTTCCAGAAATTTATCTTCAATATTGTCACTAG
GGACATAAGTGACAGGTGAAGGTTCCCATGGAGACTGCTTTGAGCAGCAGACAGAGAATG
GCTTACAGCTCATACATGGAAAGGTCATACGGTTTGGCACTTTTTGGGTTTTCACCAATT
GTAGCTGTTTATGACATGCACGTCGCAGAGTAACCGCCGATGTGGCAGATAGCAGGTGGG
TTAAAGATCCCATTACCCTTTGTTCATAAACTGAAAGCTAGGTGACCAACAGAGTAACTG
TGACTGTAATTGCCTGGATCGAATAAATGGCACCATGTCAAGTAAAGTTAGATCATCAAC
AATCAGAAGACAAATCATCATATTACTTCGTAAATCAAAAAATCTAATATTGATCTAAAC
GTTTAGGTGGTTATCTGATAAGAGATTCAAGTTCTGACATAAGGCCAAGCAAGAGATGAG
TAGTTTGCAGATAACGAATGTCCCTCATCAATCATTGGGCAAACAAAGGACCACTTCACA
AGATGAAGCTACTTGTCTGAACATGTACATGTCTGATCAATTCATATGCTCCCCCCAATA
TTTGAATTTTAATACGAGCACTTCAAATATCGAGAAATAATGTAAATGAAGCTGAAGGAA
CCGAGCAGAAACAGAGTGGGTATTAATCAGCAAGAAAAGCAGTTCCATAGAAACAAAATA
AGAAAGAACAAGGTTAAACCCTTTTCCTACTTGGGCCCTGAGAAAAGTCTCATTTTGTTG
AAAAGTTTGAAACTGAAGTCATTAAACACATTATCACGCTTAATTAGCTGGTTGAAAGGC
TCAAAGTTGAATCTAGGAAGAATTTAACATGTAAAGATTTGTTTTGGACAGAATAAAATT
ACAAATTTGTAACATTTCACTCCATGCTTCTCTATTGCACCCAACATCTTCATTCTGCAG
TCGACATAATTGCAGAGAATAGAAGCAAATGAACTTGGTTTTATCTAAAATCAGCTTAGC
CCTATACTCAAATAGCAAACTAGTATAATGAGACTTGTCCTACATCAGGTTGTCACCACA
TCTATCTGTATGTTGTATTGAACGATTTCTGGTGACACTGAATCGATTTGTTAAGTAACT
ACTATACTCAGAATTTGCAGACCAACAACAGTGAGATCATTATT