Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g090830.2.1
CDS Infomation

LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9IBW5_POPTR)
Sequence

ATGGCTTGTGTTGATGAAGAACAAAAGCCAAGTTTTAAGCATTATTGTAGAGTTTGTAAG
AAGGGTTTCATGTGTGGGAGAGCTCTAGGTGGACATATGAGAGCTCATGGTATTGGAGAT
GAGAGGGTAAATATGGATGATGATGATGATGATGATGATGAAGAAGCTAGTGATTGGGAA
GAAAACCATGGTGATAATAAGAGGATGTACCAATTAAGAGCAAACCCTAACAGGTTAAAG
AGTACTAGGGTATGTGAAAATTGTGGACAAGAATTTATGTCATGGAAATCTTTTCTTGAA
CATGGTAAATATTGTGGCTCTGATGATGCTTATGATGATCATTCCTTGGTATCATCACCT
TGTTCTGATGGTGAGGAATATAACATAGGTGAAAGAAAAGGGTATGGTTGGTCTAAAAGG
AAAAGGTCCTTGAGGAGTACTAAAGTTGGAACTTTTACTTCATCTTATAATACTAATAAT
GCTTATTCAAGTGAACAAGAAGATCTTCTTCTTGCAAAATGGCTTATAGATTTAGCTAAT
TCAGGGGTGGACCCATTAACCATCGAGCCAGAAGAGTCATGTGCCTCCGCTAGTAAAGAG
GAGGAGAGGCGGAACCCTATAATGACCTACCTTAGTACTTCGGGCCTCATGAACCAAGAC
AAAGATCTCGAACATGATAGAAAAAGTGAATTTTTCATCATACCTAGTTTGGACAAGGCT
AAAGGGGTTCCCAAAGGATTATTTGAATGTAAAGCATGCAAGAAACTATTCAATTCTCAC
CAAGCCCTAGGTGGACATAGGGCAAGTCACAAGAAGGTTAAAGGATGTTATGCAGCCAAA
CAAAATCAATTAGATGATAATACACATGATCAAGATAATTACTTGAAAGGTTCAAAATCA
TCATCTTATAATTACCAATTTGAACAAGGGTCCTCATTAACAGGAGCTTCAAAGAGAAAA
TCAAAAGTACATGAATGTTCAATATGCCATAGAGTTTTTTCAACTGGACAAGCTTTAGGT
GGCCATAAAAGGTGTCATTGGATCACTTCCAACTCTCAAGATTCATCTATCTTCACACCA
AAATTTCATTTTCACAATCCCCTTAAGCAAATTAATGAAAGATCAACATTGGAGAATCAA
GATCCATTGGATCTTAACGTTCCACCTAATGATCAAAACATGTCAAGAATAAAGCAAGAA
CCTTGGAAAATAATCAATCCCTTTGAGGTCTCCACAGATATACACATGCATCCATGGAGT
AGTACAAATAATAGTGATCATACAAAAAAAGAAACAAAAGATGATGTTGTTAACCACAAC
AATAGTGATCAACCCCGCGAAGAAAATGAGGATGACAACTTCAAGAACAAGAACAAGAAC
AACAACAACAACAACAATGTCCGTCAAGATGATGCAACACAAATCAATGTAGAAGAGGAT
GATGAAGCAGATAGTAAGTTGAAGCTAGCAAAATTAAGTGACCTAACTACTTCTGGTAAT
CCTTCACAATGGTTACAAGTTGGTATTGGTCCAACAAATAAGGTTGAGGCTGACTTATAA

Peptide Sequence

PEP ID

Solyc01g090830.2.1
PEP Infomation

LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9IBW5_POPTR)
Sequence

MACVDEEQKPSFKHYCRVCKKGFMCGRALGGHMRAHGIGDERVNMDDDDDDDDEEASDWE
ENHGDNKRMYQLRANPNRLKSTRVCENCGQEFMSWKSFLEHGKYCGSDDAYDDHSLVSSP
CSDGEEYNIGERKGYGWSKRKRSLRSTKVGTFTSSYNTNNAYSSEQEDLLLAKWLIDLAN
SGVDPLTIEPEESCASASKEEERRNPIMTYLSTSGLMNQDKDLEHDRKSEFFIIPSLDKA
KGVPKGLFECKACKKLFNSHQALGGHRASHKKVKGCYAAKQNQLDDNTHDQDNYLKGSKS
SSYNYQFEQGSSLTGASKRKSKVHECSICHRVFSTGQALGGHKRCHWITSNSQDSSIFTP
KFHFHNPLKQINERSTLENQDPLDLNVPPNDQNMSRIKQEPWKIINPFEVSTDIHMHPWS
STNNSDHTKKETKDDVVNHNNSDQPREENEDDNFKNKNKNNNNNNNVRQDDATQINVEED
DEADSKLKLAKLSDLTTSGNPSQWLQVGIGPTNKVEADL*

Transcript Sequence

Transcript ID

Solyc01g090830.2.1
Transcript Infomation

LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9IBW5_POPTR)
Sequence

TATCCATATTAATTATCATCATAATAACTCTCACTTTTCTTCTTTATATTGTCTTTTAAT
TTCTTACACATAGTTGACTAAATTAACTAGTGTTAAGGTCTTTTTTTTTGGAAGGGGGTT
ATAGTCATGGCTTGTGTTGATGAAGAACAAAAGCCAAGTTTTAAGCATTATTGTAGAGTT
TGTAAGAAGGGTTTCATGTGTGGGAGAGCTCTAGGTGGACATATGAGAGCTCATGGTATT
GGAGATGAGAGGGTAAATATGGATGATGATGATGATGATGATGATGAAGAAGCTAGTGAT
TGGGAAGAAAACCATGGTGATAATAAGAGGATGTACCAATTAAGAGCAAACCCTAACAGG
TTAAAGAGTACTAGGGTATGTGAAAATTGTGGACAAGAATTTATGTCATGGAAATCTTTT
CTTGAACATGGTAAATATTGTGGCTCTGATGATGCTTATGATGATCATTCCTTGGTATCA
TCACCTTGTTCTGATGGTGAGGAATATAACATAGGTGAAAGAAAAGGGTATGGTTGGTCT
AAAAGGAAAAGGTCCTTGAGGAGTACTAAAGTTGGAACTTTTACTTCATCTTATAATACT
AATAATGCTTATTCAAGTGAACAAGAAGATCTTCTTCTTGCAAAATGGCTTATAGATTTA
GCTAATTCAGGGGTGGACCCATTAACCATCGAGCCAGAAGAGTCATGTGCCTCCGCTAGT
AAAGAGGAGGAGAGGCGGAACCCTATAATGACCTACCTTAGTACTTCGGGCCTCATGAAC
CAAGACAAAGATCTCGAACATGATAGAAAAAGTGAATTTTTCATCATACCTAGTTTGGAC
AAGGCTAAAGGGGTTCCCAAAGGATTATTTGAATGTAAAGCATGCAAGAAACTATTCAAT
TCTCACCAAGCCCTAGGTGGACATAGGGCAAGTCACAAGAAGGTTAAAGGATGTTATGCA
GCCAAACAAAATCAATTAGATGATAATACACATGATCAAGATAATTACTTGAAAGGTTCA
AAATCATCATCTTATAATTACCAATTTGAACAAGGGTCCTCATTAACAGGAGCTTCAAAG
AGAAAATCAAAAGTACATGAATGTTCAATATGCCATAGAGTTTTTTCAACTGGACAAGCT
TTAGGTGGCCATAAAAGGTGTCATTGGATCACTTCCAACTCTCAAGATTCATCTATCTTC
ACACCAAAATTTCATTTTCACAATCCCCTTAAGCAAATTAATGAAAGATCAACATTGGAG
AATCAAGATCCATTGGATCTTAACGTTCCACCTAATGATCAAAACATGTCAAGAATAAAG
CAAGAACCTTGGAAAATAATCAATCCCTTTGAGGTCTCCACAGATATACACATGCATCCA
TGGAGTAGTACAAATAATAGTGATCATACAAAAAAAGAAACAAAAGATGATGTTGTTAAC
CACAACAATAGTGATCAACCCCGCGAAGAAAATGAGGATGACAACTTCAAGAACAAGAAC
AAGAACAACAACAACAACAACAATGTCCGTCAAGATGATGCAACACAAATCAATGTAGAA
GAGGATGATGAAGCAGATAGTAAGTTGAAGCTAGCAAAATTAAGTGACCTAACTACTTCT
GGTAATCCTTCACAATGGTTACAAGTTGGTATTGGTCCAACAAATAAGGTTGAGGCTGAC
TTATAA