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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g090630.3.1
CDS Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

ATGAACAAAAACACATTAATTATGAGTGATTCCAAAATTCCCATAATTGATCTCTTCAAA
TTAGACGAATACTCAAATTCTTGGGTACCATTGTGCAATAACGTTCGACATGCACTTGAA
GAATATGGTTATTTTATAGCACTCTATGACGATGATAAGAAGAATAAGATTTCAACAGAA
ATATTCGATGTAATGGAAGAATTATTTGATCTTCCCATTGAAACAAAGAAAAAAAACACT
TCTGACTTTTATTTCTATCAATGGAATGGTCTACTGAAAAAAGCTCCTCTTCATGAAAGC
TTTGGGATCCCACATCCAACTGATGTTGAAGCACTACAAAGCTTCACTACACTTATGTGG
CCACAAGGCAACCGCAGATTTTGTGAAACAGTGACATCGTACGTCAAGGTAGCAGCAGAA
GTAGAGCAATTGGTGGATAAAATGGTATTCGAGAGCTATGGAGTAGCAGAAAGGCACTAT
GAATCTCATGTTGCAGCCACTACATACCTCCTCCGCCCTATTAAGTACAGACCACCACTG
CAAGGGGCGGAGGACGGGTCTGGCAATATCGGTTGCAATGCACACACGGATAAAAGCTTC
TCCACACTTCTCTTTCAGAATCAAATAAATGCTTTGCAAGTTGAAACCAAAAGTGGAGAG
TGGATTGACGTTGATGTCCCTCCCTCCGCCTTCGTCTTCTTGGCTGGTGATGCTTATGAG
GCATGGAGCAATGGAAGAATATATGCAGCAAGGCACCAAGTGTTGATGAAAGAGGATAAG
GAAAGGTATACATTGGCGTTATTCACATTCAACAAAGGAATAACAGAAATACCTGAGGAA
TTAGTGGATGAAACACATCCTATACAATACAAGCCTTTTGATAATTTTGGATTAGCTTGG
TACTACCTCTCAGGTGCTAGCTCCATGGCTCATGGCACTGCTAAACCTTACTGTGGAATT
AATGCTACGTAA

Peptide Sequence

PEP ID

Solyc01g090630.3.1
PEP Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

MNKNTLIMSDSKIPIIDLFKLDEYSNSWVPLCNNVRHALEEYGYFIALYDDDKKNKISTE
IFDVMEELFDLPIETKKKNTSDFYFYQWNGLLKKAPLHESFGIPHPTDVEALQSFTTLMW
PQGNRRFCETVTSYVKVAAEVEQLVDKMVFESYGVAERHYESHVAATTYLLRPIKYRPPL
QGAEDGSGNIGCNAHTDKSFSTLLFQNQINALQVETKSGEWIDVDVPPSAFVFLAGDAYE
AWSNGRIYAARHQVLMKEDKERYTLALFTFNKGITEIPEELVDETHPIQYKPFDNFGLAW
YYLSGASSMAHGTAKPYCGINAT*

Transcript Sequence

Transcript ID

Solyc01g090630.3.1
Transcript Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

AAAAAAAAAATAATAAATACGAGTACACTTTACTTAACACTTCAGAAACGTCTATATAAT
TAACTTTGAAAGAGTGACATGCATTAGTATTAATCCCCCATATACCAAAGCTAGAAACAT
TGAGCTTCAAATTTTGAAAATGAACAAAAACACATTAATTATGAGTGATTCCAAAATTCC
CATAATTGATCTCTTCAAATTAGACGAATACTCAAATTCTTGGGTACCATTGTGCAATAA
CGTTCGACATGCACTTGAAGAATATGGTTATTTTATAGCACTCTATGACGATGATAAGAA
GAATAAGATTTCAACAGAAATATTCGATGTAATGGAAGAATTATTTGATCTTCCCATTGA
AACAAAGAAAAAAAACACTTCTGACTTTTATTTCTATCAATGGAATGGTCTACTGAAAAA
AGCTCCTCTTCATGAAAGCTTTGGGATCCCACATCCAACTGATGTTGAAGCACTACAAAG
CTTCACTACACTTATGTGGCCACAAGGCAACCGCAGATTTTGTGAAACAGTGACATCGTA
CGTCAAGGTAGCAGCAGAAGTAGAGCAATTGGTGGATAAAATGGTATTCGAGAGCTATGG
AGTAGCAGAAAGGCACTATGAATCTCATGTTGCAGCCACTACATACCTCCTCCGCCCTAT
TAAGTACAGACCACCACTGCAAGGGGCGGAGGACGGGTCTGGCAATATCGGTTGCAATGC
ACACACGGATAAAAGCTTCTCCACACTTCTCTTTCAGAATCAAATAAATGCTTTGCAAGT
TGAAACCAAAAGTGGAGAGTGGATTGACGTTGATGTCCCTCCCTCCGCCTTCGTCTTCTT
GGCTGGTGATGCTTATGAGGCATGGAGCAATGGAAGAATATATGCAGCAAGGCACCAAGT
GTTGATGAAAGAGGATAAGGAAAGGTATACATTGGCGTTATTCACATTCAACAAAGGAAT
AACAGAAATACCTGAGGAATTAGTGGATGAAACACATCCTATACAATACAAGCCTTTTGA
TAATTTTGGATTAGCTTGGTACTACCTCTCAGGTGCTAGCTCCATGGCTCATGGCACTGC
TAAACCTTACTGTGGAATTAATGCTACGTAACTTCAATTTCATGTTCTTACAATTAAGAT
TTCATAGTCTGGAAATTGAATTATTAAGGAAATAAAAGACAAAACTATGTAACAAGTGAG
TGGGACTTCAATTATATATAAATCCATCCGGTCAACTTCTCTACTTAGTTCACTCAAACT
ACCAATCGTTTAATTTTCAAAAAAATGAACTAGTTCTCTAAAGATTAAAACTAAATGTTC
TCTAGATCTCATGACCCTGTCCACTGGCAAGTGTCAAGGGAGAAGAAAATACTAATTCAC
ACCAGTGTTTTGCACCAAACCAAATTAATTTTAGCATAGTTAAGCGATAAGTTACAAATA
TTGACAAGGTAACCTAGTATGGCTGAGTTGTACAAACAACTTCTAGATACCAAACCATTG
ATTAGATTGTTTAAGGAGGTTTCTACATCAAATTGTCATTGCTTACCTCACGTCCTGATC
AAAGGCCAACTTCATGCTGCATGAGGTCAATCTGCACTAATGAGACTGTTCCCTG