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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g090610.3.1
CDS Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

ATGAGTGATTACAAAATCCCCAAAATTAATCTCACCAAATTAGACAAGCACTCAAATTCT
TGGGTACCATTATGCAATGAGGTTCGACATGCCCTTGAAGAACATGGTTATTTTATAGCA
CTATATGAGGATGCTAATAATAAAATTTCCAAGGAAATATTTGATGTAATGGAAGAATTA
TTTGATCTCCCCATCGAAACAAAGAGAAAAAACACTTCAGACGTTTACTTCTATCGTTAC
AAAGGTCAATTATTAACCGCTCCTCTTCACGAAAGCTTTGGAATCCCACATCCAACTGAT
GTTGAAGCACTTCAAAGCTTCACCACACTTATGTGGCCACAAGGCAACCAAAGATTTTGT
GAAACAATGACATCGTACATAAAGGTAGGAGCAGAAATAGAACAGTTGGTTGATAAAATG
GTGTTTGAAAGCTACGGATTACCAGAAAAGCACTACGAATCTCATGTCGCAGCTACTACA
TACCTCCTCCGCCCCACCAAGTACAGAGCAGCACCTGCTGGGGCGGAGGACGGTATTGGC
AATGTAGGTTCCAATATACATACAGATAAAGGCTTCTCAGCGGTTCTATTTCAGAATCAG
ATAAATGCTTTGCAAATCGAAACAAAAAGTGGGGAGTGGATTCCTATTGATGTACCTCCA
TCTGCATTTGTCTTCGTGGCTGGTGATGCTTATGAGGCATGGAGTAATGGAAGAATATAT
TCACCAAGACACCAAGTGTTGATGAAAGAGGATAAGCAAAGGTATACATTGGCGTTATTC
ACATTCAATAAAGGAATAACAGATATACCTGAGGAATTGGTGGATGAAACACATCCTTTA
CAATACAAGCCTTTTGATAATTTTGATTTAGTTATGTACTACAGTACTGGTGCTAGCCCC
ATGGCTTATGGCACTGCTAAACCTTACTGTGGTATTAATGCTCAATAG

Peptide Sequence

PEP ID

Solyc01g090610.3.1
PEP Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

MSDYKIPKINLTKLDKHSNSWVPLCNEVRHALEEHGYFIALYEDANNKISKEIFDVMEEL
FDLPIETKRKNTSDVYFYRYKGQLLTAPLHESFGIPHPTDVEALQSFTTLMWPQGNQRFC
ETMTSYIKVGAEIEQLVDKMVFESYGLPEKHYESHVAATTYLLRPTKYRAAPAGAEDGIG
NVGSNIHTDKGFSAVLFQNQINALQIETKSGEWIPIDVPPSAFVFVAGDAYEAWSNGRIY
SPRHQVLMKEDKQRYTLALFTFNKGITDIPEELVDETHPLQYKPFDNFDLVMYYSTGASP
MAYGTAKPYCGINAQ*

Transcript Sequence

Transcript ID

Solyc01g090610.3.1
Transcript Infomation

2-oxoglutarate-dependent dioxygenase (AHRD V3.3 *** A0A061G9S7_THECC)
Sequence

GTAAAAAATAATGGAGCATTTTGTAAACAAGTGGATGTAACGCCTATATAACTTGAGAGA
GTGATGCATATACCTATAAACCTTTAAGGTTCAAAGTAAAAACCCATTAATTATGAGTGA
TTACAAAATCCCCAAAATTAATCTCACCAAATTAGACAAGCACTCAAATTCTTGGGTACC
ATTATGCAATGAGGTTCGACATGCCCTTGAAGAACATGGTTATTTTATAGCACTATATGA
GGATGCTAATAATAAAATTTCCAAGGAAATATTTGATGTAATGGAAGAATTATTTGATCT
CCCCATCGAAACAAAGAGAAAAAACACTTCAGACGTTTACTTCTATCGTTACAAAGGTCA
ATTATTAACCGCTCCTCTTCACGAAAGCTTTGGAATCCCACATCCAACTGATGTTGAAGC
ACTTCAAAGCTTCACCACACTTATGTGGCCACAAGGCAACCAAAGATTTTGTGAAACAAT
GACATCGTACATAAAGGTAGGAGCAGAAATAGAACAGTTGGTTGATAAAATGGTGTTTGA
AAGCTACGGATTACCAGAAAAGCACTACGAATCTCATGTCGCAGCTACTACATACCTCCT
CCGCCCCACCAAGTACAGAGCAGCACCTGCTGGGGCGGAGGACGGTATTGGCAATGTAGG
TTCCAATATACATACAGATAAAGGCTTCTCAGCGGTTCTATTTCAGAATCAGATAAATGC
TTTGCAAATCGAAACAAAAAGTGGGGAGTGGATTCCTATTGATGTACCTCCATCTGCATT
TGTCTTCGTGGCTGGTGATGCTTATGAGGCATGGAGTAATGGAAGAATATATTCACCAAG
ACACCAAGTGTTGATGAAAGAGGATAAGCAAAGGTATACATTGGCGTTATTCACATTCAA
TAAAGGAATAACAGATATACCTGAGGAATTGGTGGATGAAACACATCCTTTACAATACAA
GCCTTTTGATAATTTTGATTTAGTTATGTACTACAGTACTGGTGCTAGCCCCATGGCTTA
TGGCACTGCTAAACCTTACTGTGGTATTAATGCTCAATAGATACCTATTTTATTATAAAT
AATATGAGTTCAAACTAGTTTTACGATGAACTCTATGTGTAATTTCAACTATCTATTTCA
AATTCAATATAATATAAGATTGTTACATTTATTGACCTAATGCTCAGTTGAAGTGA