Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g090290.3.1
CDS Infomation

COP9 signalosome complex subunit 7 (AHRD V3.3 *** W9QI01_9ROSA)
Sequence

ATGGATATCGAACAAAAGCAAGCGGAGCACATCGACTTCTTTGTGAAACAAGCATCAGCA
CTCAAGGGTTCTGCCCTTACCACTGTTATTGTTGAAGCCACTTCGCATCCATCACTCTTT
GCTTTTTCAGAGATTCTTTCTGTTCCCAGTGTTCTCGAGCTTGGAGGAACTGAGAATTCA
GTATACCTTGATTTGCTTCGTTTGTTTGCTCATGGAACATGGAGTGACTACAAAAGTATT
GCTGGCTGTCTTCCTCAGTTGGCGTCTGCCCAAGCTCTCAAGTTGAAGCAACTTACTGTG
CTTACACTAGCTGATACAAGCAAGGAGCTTCCATATGATCAACTTATGCAGGAGTTGGAT
GTCACAAATGTGCGTGAACTTGAAGATTTTCTCATAAATGAGTGCATGTATGTGGGCATA
GTTAGAGGAAAGCTGGATCAGTTGAAAAGATGCTTTGAGGTACAATTTGCTGCAGGGAGA
GATCTCAGACCCGGTCAATTGGGGAATATGCTACAGACATTAACTGACTGGTTGACTACT
TCAGACAATCTTCTTGTGTCAATTCAAGAGAAAATCAAATGGGCAGATACAATGAGTGAA
TCGGACAGGAAGCACCGGAAGGAAGTTGAAGAAAGGGTTGATGAGGTGAAGAAGTCACTC
TCTTTGAAGAAGCTACAAACTGTAAGCAGGCCGACGTTGACTTCAGAGGGCATGAGGAGA
TCTACTCTGAATCTGGTGGAGTGA

Peptide Sequence

PEP ID

Solyc01g090290.3.1
PEP Infomation

COP9 signalosome complex subunit 7 (AHRD V3.3 *** W9QI01_9ROSA)
Sequence

MDIEQKQAEHIDFFVKQASALKGSALTTVIVEATSHPSLFAFSEILSVPSVLELGGTENS
VYLDLLRLFAHGTWSDYKSIAGCLPQLASAQALKLKQLTVLTLADTSKELPYDQLMQELD
VTNVRELEDFLINECMYVGIVRGKLDQLKRCFEVQFAAGRDLRPGQLGNMLQTLTDWLTT
SDNLLVSIQEKIKWADTMSESDRKHRKEVEERVDEVKKSLSLKKLQTVSRPTLTSEGMRR
STLNLVE*

Transcript Sequence

Transcript ID

Solyc01g090290.3.1
Transcript Infomation

COP9 signalosome complex subunit 7 (AHRD V3.3 *** W9QI01_9ROSA)
Sequence

GGAGTAATTATTATTGTAAAATATTGAAAGAAGCTTAAAAGTAAATCAAAAGTATAAAAG
GACCCGCGATGGGCTCAAAGCATCATACCAAATCAGACAAGCGCCCTTCTTCTCCGTGGG
ACTCCAAAATTTTACAGTTAAAAAAGCCCTCTTCTCTATTTGTTTTTGTGATAAATCTTT
GAATCGGAAATCAGAAACCCTAATAATTTTCTTTGCTTTTGTCTATAAATGTTATTGAAC
CCCTGATTACTTGTGATTATTAATTATTCATAGAGAGATGGATATCGAACAAAAGCAAGC
GGAGCACATCGACTTCTTTGTGAAACAAGCATCAGCACTCAAGGGTTCTGCCCTTACCAC
TGTTATTGTTGAAGCCACTTCGCATCCATCACTCTTTGCTTTTTCAGAGATTCTTTCTGT
TCCCAGTGTTCTCGAGCTTGGAGGAACTGAGAATTCAGTATACCTTGATTTGCTTCGTTT
GTTTGCTCATGGAACATGGAGTGACTACAAAAGTATTGCTGGCTGTCTTCCTCAGTTGGC
GTCTGCCCAAGCTCTCAAGTTGAAGCAACTTACTGTGCTTACACTAGCTGATACAAGCAA
GGAGCTTCCATATGATCAACTTATGCAGGAGTTGGATGTCACAAATGTGCGTGAACTTGA
AGATTTTCTCATAAATGAGTGCATGTATGTGGGCATAGTTAGAGGAAAGCTGGATCAGTT
GAAAAGATGCTTTGAGGTACAATTTGCTGCAGGGAGAGATCTCAGACCCGGTCAATTGGG
GAATATGCTACAGACATTAACTGACTGGTTGACTACTTCAGACAATCTTCTTGTGTCAAT
TCAAGAGAAAATCAAATGGGCAGATACAATGAGTGAATCGGACAGGAAGCACCGGAAGGA
AGTTGAAGAAAGGGTTGATGAGGTGAAGAAGTCACTCTCTTTGAAGAAGCTACAAACTGT
AAGCAGGCCGACGTTGACTTCAGAGGGCATGAGGAGATCTACTCTGAATCTGGTGGAGTG
ATGGATTATGAGGAAGACCGAGGCCGACCGAAGAGGAGACGACACCCTATTGGTTAAGGT
GATGGAGTTGGGGGCGATGTTAGGAAGAATTAGAGTGGCTGCTGGCCAGTTTTTTTTTTT
ACCATAGATGCTTTCTGCTTTAGCAGACAGTTTCAACCCTTCTAAAAATTTGTCATGCTG
TGAATGGAACTTGTAGACTCGAAGTACCCCATAGAGCCATATTTTGCACTTAACTCCATT
ATTTCCATCTTGTTTGCCTTTTTTGAGTTGGAAAGATTTTAATATGATGACGACGACGAT
GATGATGCGGCTGAAACTTGTGGAGCTGATTCATTTTACATTCATACAAGTCTATATGCT
TTCATGATTTTTTTCCCCCAGGTTTTTGTTTTGAGTGATTGC