Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g090230.3.1
CDS Infomation

GRAM domain family protein (AHRD V3.3 *** AT1G02120.1)
Sequence

ATGGCTGCCGTCGTCGTACCGGAGAAGATCATGTCGCCGTCGCCTCCGCCGTCGCAGCAT
ATGCATCTCTCACCTCCGACTTCCCGGCGCAGCACGGACACATCCTCTGGCACTAACGCC
TCTCCCGATCGCCGCTCTTCCCTTGATCTTCCCTCATCTTCCACCTCTAGCCCATCACGG
TTGTCTGATGCTCAGAATCAGCTAGCTTTGAAGAGTGAAGAGTATCGACTACTTTTTCGT
TTACCACCTGATGAAGTCCTGGTTCAAGATTTTAATTGTGCGCTGCAAGAGAATTTTCTA
CTTCAGGGTCATATGTATCTCTTTGTCCATAGTATTTGCTTCTATTCCAACCTCTTCGGC
TTTGAGACAAAGAAAATTATTCCTTTTCATGAGATAACGGCAGTACGAAGAGCTAAAGCT
GCGGCCATATTCCCGACCGCAATAGAAATAGTAGCTGGAGGAAAGAAGTACTTTTTTACA
TCTTTCCTTTCCCGAGATGAAGCTTTTAAGCTTATCGATGATGGTTGGCTACAACACAAT
GGTGCAGCTAAGGAGTCTGCGGATCTGGAACCACAATCTGATCTAACTTTCCTAGATAGT
GGAATAGTAGAAGGAGCAGATAGTTTCAGGCAGGCTACGGAACGGGTGGAATGCCTAGAA
AGGAATGAGGACAATATGGTACAGGAAGACTCAAAGCCATTAGTCAATGGTCAGTTTGAA
ATTGTATCAAACCCTTCACGAGTGCAGGACAACGTGGAGGAAGAAGTGGTTATTGTTCAA
AATACTGATTGTTCACCATCTGAAAAGTCCTATGGTTTGAAGCAGGAGGATTCAGATGCA
CCTAGGGTCCCTGAAGGGTTTACACTTGTTGCAGAGGCAAAATTTCCGGTTACGGTTGAG
AAGTTCTTTGAACTCTTCATTTCAGATGCCGGTGTTGCTTTTCAGGAGTCATTCCGTAGA
AACTGTGGTGATAAAGATTTTAAGTGTACACAGTGGCGTCCTCATGAAGAATTTGGGCAC
ACTCGAAATTTGTCGTTTCAGCATCCTATTAAAATCTATTTAGGTCCAAAATTTGGTGGC
TGCCACGAGTTTCAGAAGTGTCGTCGTTACAGAAACAGTCACCTGGTGATTGAGTCATCA
CAAGAAATCAGTGGTGTTCCTTTTGCAGACTATTTTCGAGTGGAGGCCTTTTGGGATGTA
GAAAGGGATGGGGATGGACCCGAAGGAGGCTGCATTATGAAGGTGTACCTAAATCTGGTA
TTTACAAAGAAAACTATATTTAGAGGGAAGATAGTGCAGTCTACAATTGATGAATGTCGA
GCCTTGTATGTCAAATGGATTGCCCTTGCGCGTGAACTGTTGAAGCAAAAGAAGTTAGAG
AAGGAAAAAGCTGATTGTCTAGCTGCTAATGTTGTAACAAGTGCTCAGCCAAAAGAAAGT
TATGAACATGTAGAGAACATAGTTGAGACAAGTAAGGAAATCAGGTCACAAATACCGCCG
CTCAACCAGCAAGCTGCAGATAGCAGTACTGTGTCCTTAACTTCCTCCTGTAGAGACTTC
ATGCTCAAGTGTTCAGCGTCCTTGAAATCTCAGAGCCATGTTTCCATTCTTATAGTGATC
ACCATTGCTGTGATACTGATTCTAATGCAGATGAGCATACTCGTGTTATTAGGCAGACCA
CAGCACGTCCAAGTGATATCTCAAGGGGACTCTGCAAGTAGCATGTATCGACTAGGAGAG
ACGGGTGTTGATATATTAGGTTTTCTGGATAAAAAGATTAATCATCTAAAAGATGAGATG
TTTATGGTCGAAACACTGCTTGGCAAAATGCAGCAGGAGCATACACTTCTAAAGACACAA
CTAAAAGAGTTTGAGCACCTACGGAAGCTGCAGAAAGGATAA

Peptide Sequence

PEP ID

Solyc01g090230.3.1
PEP Infomation

GRAM domain family protein (AHRD V3.3 *** AT1G02120.1)
Sequence

MAAVVVPEKIMSPSPPPSQHMHLSPPTSRRSTDTSSGTNASPDRRSSLDLPSSSTSSPSR
LSDAQNQLALKSEEYRLLFRLPPDEVLVQDFNCALQENFLLQGHMYLFVHSICFYSNLFG
FETKKIIPFHEITAVRRAKAAAIFPTAIEIVAGGKKYFFTSFLSRDEAFKLIDDGWLQHN
GAAKESADLEPQSDLTFLDSGIVEGADSFRQATERVECLERNEDNMVQEDSKPLVNGQFE
IVSNPSRVQDNVEEEVVIVQNTDCSPSEKSYGLKQEDSDAPRVPEGFTLVAEAKFPVTVE
KFFELFISDAGVAFQESFRRNCGDKDFKCTQWRPHEEFGHTRNLSFQHPIKIYLGPKFGG
CHEFQKCRRYRNSHLVIESSQEISGVPFADYFRVEAFWDVERDGDGPEGGCIMKVYLNLV
FTKKTIFRGKIVQSTIDECRALYVKWIALARELLKQKKLEKEKADCLAANVVTSAQPKES
YEHVENIVETSKEIRSQIPPLNQQAADSSTVSLTSSCRDFMLKCSASLKSQSHVSILIVI
TIAVILILMQMSILVLLGRPQHVQVISQGDSASSMYRLGETGVDILGFLDKKINHLKDEM
FMVETLLGKMQQEHTLLKTQLKEFEHLRKLQKG*

Transcript Sequence

Transcript ID

Solyc01g090230.3.1
Transcript Infomation

GRAM domain family protein (AHRD V3.3 *** AT1G02120.1)
Sequence

TTCTTTTGACTCTTCGTTGGCTTATAAATTAATTTCACAACCACCATCACCGTCATGGCT
GCCGTCGTCGTACCGGAGAAGATCATGTCGCCGTCGCCTCCGCCGTCGCAGCATATGCAT
CTCTCACCTCCGACTTCCCGGCGCAGCACGGACACATCCTCTGGCACTAACGCCTCTCCC
GATCGCCGCTCTTCCCTTGATCTTCCCTCATCTTCCACCTCTAGCCCATCACGGTTGTCT
GATGCTCAGAATCAGCTAGCTTTGAAGAGTGAAGAGTATCGACTACTTTTTCGTTTACCA
CCTGATGAAGTCCTGGTTCAAGATTTTAATTGTGCGCTGCAAGAGAATTTTCTACTTCAG
GGTCATATGTATCTCTTTGTCCATAGTATTTGCTTCTATTCCAACCTCTTCGGCTTTGAG
ACAAAGAAAATTATTCCTTTTCATGAGATAACGGCAGTACGAAGAGCTAAAGCTGCGGCC
ATATTCCCGACCGCAATAGAAATAGTAGCTGGAGGAAAGAAGTACTTTTTTACATCTTTC
CTTTCCCGAGATGAAGCTTTTAAGCTTATCGATGATGGTTGGCTACAACACAATGGTGCA
GCTAAGGAGTCTGCGGATCTGGAACCACAATCTGATCTAACTTTCCTAGATAGTGGAATA
GTAGAAGGAGCAGATAGTTTCAGGCAGGCTACGGAACGGGTGGAATGCCTAGAAAGGAAT
GAGGACAATATGGTACAGGAAGACTCAAAGCCATTAGTCAATGGTCAGTTTGAAATTGTA
TCAAACCCTTCACGAGTGCAGGACAACGTGGAGGAAGAAGTGGTTATTGTTCAAAATACT
GATTGTTCACCATCTGAAAAGTCCTATGGTTTGAAGCAGGAGGATTCAGATGCACCTAGG
GTCCCTGAAGGGTTTACACTTGTTGCAGAGGCAAAATTTCCGGTTACGGTTGAGAAGTTC
TTTGAACTCTTCATTTCAGATGCCGGTGTTGCTTTTCAGGAGTCATTCCGTAGAAACTGT
GGTGATAAAGATTTTAAGTGTACACAGTGGCGTCCTCATGAAGAATTTGGGCACACTCGA
AATTTGTCGTTTCAGCATCCTATTAAAATCTATTTAGGTCCAAAATTTGGTGGCTGCCAC
GAGTTTCAGAAGTGTCGTCGTTACAGAAACAGTCACCTGGTGATTGAGTCATCACAAGAA
ATCAGTGGTGTTCCTTTTGCAGACTATTTTCGAGTGGAGGCCTTTTGGGATGTAGAAAGG
GATGGGGATGGACCCGAAGGAGGCTGCATTATGAAGGTGTACCTAAATCTGGTATTTACA
AAGAAAACTATATTTAGAGGGAAGATAGTGCAGTCTACAATTGATGAATGTCGAGCCTTG
TATGTCAAATGGATTGCCCTTGCGCGTGAACTGTTGAAGCAAAAGAAGTTAGAGAAGGAA
AAAGCTGATTGTCTAGCTGCTAATGTTGTAACAAGTGCTCAGCCAAAAGAAAGTTATGAA
CATGTAGAGAACATAGTTGAGACAAGTAAGGAAATCAGGTCACAAATACCGCCGCTCAAC
CAGCAAGCTGCAGATAGCAGTACTGTGTCCTTAACTTCCTCCTGTAGAGACTTCATGCTC
AAGTGTTCAGCGTCCTTGAAATCTCAGAGCCATGTTTCCATTCTTATAGTGATCACCATT
GCTGTGATACTGATTCTAATGCAGATGAGCATACTCGTGTTATTAGGCAGACCACAGCAC
GTCCAAGTGATATCTCAAGGGGACTCTGCAAGTAGCATGTATCGACTAGGAGAGACGGGT
GTTGATATATTAGGTTTTCTGGATAAAAAGATTAATCATCTAAAAGATGAGATGTTTATG
GTCGAAACACTGCTTGGCAAAATGCAGCAGGAGCATACACTTCTAAAGACACAACTAAAA
GAGTTTGAGCACCTACGGAAGCTGCAGAAAGGATAAATGAGCTGTGTATATATATATATA
GATGCTGCTGCTTCTTTTGTCCATTTTTATTTTCTTTCTTTGGTGAAAGGCTTGCATGCT
GTACATTTTTTCTTATTTTGTGTTCTGGACACTCATGTGCATCTTCAATTACCACGTGAT
TGTACTATCTACGTAAAGTAAAATAATTGTAATTATGTAACAAATACAAGCCCCCTAAGA
GCCTTTGTATCATGAATTGAATAATCTTTTATTGAGAATGGTAAAATATCCAAACTATGA
TTTGAATAATTATGGAAGTAGGACATATGGG