Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g088750.3.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HIE4_POPTR)
Sequence	ATGTGGAGAAGAGCTCTCTGTAATCTCTCAAAAAGACCCTTTTCTTCACAACCTGAAATA CCCACTTTGTATTCCTTTCTCCAGCCTTCAATTTTCTCCTTAAAAACAACTGAATCACCT TCTACAACCCCACCAAAACCCCATGACCAAACCCCTCTAACCTTAACACAAGAACACAAA TCTAATCTTGAATCCACTCTTCTAGATTCAATCAGAAGTAACAATACAGATGAAGCATGG AAATCATTCAAGACTCTTTCAAATTACTCTGCTTTCCCAAGTAAGTCACTTACCAATTCA GTAATCATTCATCTGTCATCATTGAATGATACCCTTAACATAAAAAGAGCATTTGCGTCA GTAGTTTTCTTGTTAGAGAAGAAGCAAGAATTGTTAAAGCCTGAAACTGTACATGTACTG TTGAATTCAATGAGGGATGCTAATAGTGCTGCCCCTGCTTTTGCATTGGTGAAGTGTATG TTCAAAAACAGATATTTCATCCCTTTTAATCTGTGGGGTGATGTTCTTGTGGAGATTTGT AGGAAAAATGGTAACTTTGGTGGGTTTTTACAAGTTTTTAATGAGAATTGTAGGCTTGCT ATTGATGAGAAGTTGAATTTCTTGAAACCTAGTTTGGAAGCTTGTAATGCTGCTCTAGAA TGTTGTTGTCGAGAGATTGAATCGACTACTGACGCGGAGAAAGTGGTGGAGACCATGTCA GTTTTGGGTGTTAGGCCTGACGAATGTAGTTTTGGTTTACTAGCTTACTTGTATGCATTG AAAGGTCTTAAAGAGAAAATAGCTGAGTTAGAAGGTTTGATTAGCGGATTTGGTTTCCCG GATAAAGGGGTTTTTCTTAGTAATTTGATTAGCGGATTTGTAAAGTGTGGTAATTTGGCG TCTGTTTCAGCAACTATTCTTCAAGGTGTAAGAGAAACATGTGGACAAGGATTATGTTTT GAAGAAAGAACTTATAGTGAAGTAGTAAGTGGGTTTCTTCAAAATGGGAGCATAAAAGAT TTAGCTATGTTGATCAGTGAAACTCAGACCTTGGAATCTCCATCTGTGATTGTTGAGAGA TCCGTTGGATATGGCATCATAAATGCTTGCGTTAATCTTGGGTTATTGGACAAGGCACAC ACGATATTTGATGAAATGAATGCTCAAGGTGCTGCTTTAGGTCTTGGAGTCTACCTTCCA ATACTGAAAGCATATAGGAAAGAGCAAAGAACCGCTGAAGCTGCTCAACTGGTGACAGAC ATAAGCGGTTTAGGTCTCCAGTTGGATGTTGCTACCTATGATGCTCTAATTGAAGCTTCA ATGTCATGTCAAGATTTTCAGTCTGCATTTTCTATGTTTAGGGACATGAGAGAAGCAAGA ATACCCGACTTGCAAGGGAGTTACTTGACAATCATGACCGGTTTAACAGAAAGTCATCGA CCTGAGCTCATGGCAGCTTTCTTGGATGAGATCGTTGAGGATCCTAGAATTGAAATCGGA ACGCATGATTGGAACTCCATCATCCATGCCTTCTGCAAGGCTGGACGGCTAGAAGATGCA AGGAGGACTTTCAGGAGAATGACCTTCCTTCAGTTTGAACCAAATGAGCAGACATATCTT TCTCTAATAAATGGAAATGTGACCGTGGAGAAGTATTTCAATGTTATGATGCTGTGGAAT GAAGTCAAAAGGAAGGTTTCTGCGGAAGGGGAGACAAAGTTAAAACTAGATAGTAGCCTG GTTGACGCATTTCTGTATGCATTGGTCAAAGGGGGCTTCTTTGATGCAGTAATGCAAGTT GTGGAGAAATCTCAAGAGATGAAAATTTTTGTTGATAAATGGAGATATAAACAAGCATTC ATGGAGAAACATAAGAAGCTCAGAGTTTCAAAGTTAAGAAGGAAAAATCGCGGTAAAATG GAGGCACTTATTGCTTTCAAAAATTGGGCGGGTTTGAGTGCTTGA

Peptide Sequence

PEP ID	Solyc01g088750.3.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HIE4_POPTR)
Sequence	MWRRALCNLSKRPFSSQPEIPTLYSFLQPSIFSLKTTESPSTTPPKPHDQTPLTLTQEHK SNLESTLLDSIRSNNTDEAWKSFKTLSNYSAFPSKSLTNSVIIHLSSLNDTLNIKRAFAS VVFLLEKKQELLKPETVHVLLNSMRDANSAAPAFALVKCMFKNRYFIPFNLWGDVLVEIC RKNGNFGGFLQVFNENCRLAIDEKLNFLKPSLEACNAALECCCREIESTTDAEKVVETMS VLGVRPDECSFGLLAYLYALKGLKEKIAELEGLISGFGFPDKGVFLSNLISGFVKCGNLA SVSATILQGVRETCGQGLCFEERTYSEVVSGFLQNGSIKDLAMLISETQTLESPSVIVER SVGYGIINACVNLGLLDKAHTIFDEMNAQGAALGLGVYLPILKAYRKEQRTAEAAQLVTD ISGLGLQLDVATYDALIEASMSCQDFQSAFSMFRDMREARIPDLQGSYLTIMTGLTESHR PELMAAFLDEIVEDPRIEIGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNEQTYL SLINGNVTVEKYFNVMMLWNEVKRKVSAEGETKLKLDSSLVDAFLYALVKGGFFDAVMQV VEKSQEMKIFVDKWRYKQAFMEKHKKLRVSKLRRKNRGKMEALIAFKNWAGLSA*

Transcript Sequence

Transcript ID	Solyc01g088750.3.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HIE4_POPTR)
Sequence	ATGTGGAGAAGAGCTCTCTGTAATCTCTCAAAAAGACCCTTTTCTTCACAACCTGAAATA CCCACTTTGTATTCCTTTCTCCAGCCTTCAATTTTCTCCTTAAAAACAACTGAATCACCT TCTACAACCCCACCAAAACCCCATGACCAAACCCCTCTAACCTTAACACAAGAACACAAA TCTAATCTTGAATCCACTCTTCTAGATTCAATCAGAAGTAACAATACAGATGAAGCATGG AAATCATTCAAGACTCTTTCAAATTACTCTGCTTTCCCAAGTAAGTCACTTACCAATTCA GTAATCATTCATCTGTCATCATTGAATGATACCCTTAACATAAAAAGAGCATTTGCGTCA GTAGTTTTCTTGTTAGAGAAGAAGCAAGAATTGTTAAAGCCTGAAACTGTACATGTACTG TTGAATTCAATGAGGGATGCTAATAGTGCTGCCCCTGCTTTTGCATTGGTGAAGTGTATG TTCAAAAACAGATATTTCATCCCTTTTAATCTGTGGGGTGATGTTCTTGTGGAGATTTGT AGGAAAAATGGTAACTTTGGTGGGTTTTTACAAGTTTTTAATGAGAATTGTAGGCTTGCT ATTGATGAGAAGTTGAATTTCTTGAAACCTAGTTTGGAAGCTTGTAATGCTGCTCTAGAA TGTTGTTGTCGAGAGATTGAATCGACTACTGACGCGGAGAAAGTGGTGGAGACCATGTCA GTTTTGGGTGTTAGGCCTGACGAATGTAGTTTTGGTTTACTAGCTTACTTGTATGCATTG AAAGGTCTTAAAGAGAAAATAGCTGAGTTAGAAGGTTTGATTAGCGGATTTGGTTTCCCG GATAAAGGGGTTTTTCTTAGTAATTTGATTAGCGGATTTGTAAAGTGTGGTAATTTGGCG TCTGTTTCAGCAACTATTCTTCAAGGTGTAAGAGAAACATGTGGACAAGGATTATGTTTT GAAGAAAGAACTTATAGTGAAGTAGTAAGTGGGTTTCTTCAAAATGGGAGCATAAAAGAT TTAGCTATGTTGATCAGTGAAACTCAGACCTTGGAATCTCCATCTGTGATTGTTGAGAGA TCCGTTGGATATGGCATCATAAATGCTTGCGTTAATCTTGGGTTATTGGACAAGGCACAC ACGATATTTGATGAAATGAATGCTCAAGGTGCTGCTTTAGGTCTTGGAGTCTACCTTCCA ATACTGAAAGCATATAGGAAAGAGCAAAGAACCGCTGAAGCTGCTCAACTGGTGACAGAC ATAAGCGGTTTAGGTCTCCAGTTGGATGTTGCTACCTATGATGCTCTAATTGAAGCTTCA ATGTCATGTCAAGATTTTCAGTCTGCATTTTCTATGTTTAGGGACATGAGAGAAGCAAGA ATACCCGACTTGCAAGGGAGTTACTTGACAATCATGACCGGTTTAACAGAAAGTCATCGA CCTGAGCTCATGGCAGCTTTCTTGGATGAGATCGTTGAGGATCCTAGAATTGAAATCGGA ACGCATGATTGGAACTCCATCATCCATGCCTTCTGCAAGGCTGGACGGCTAGAAGATGCA AGGAGGACTTTCAGGAGAATGACCTTCCTTCAGTTTGAACCAAATGAGCAGACATATCTT TCTCTAATAAATGGAAATGTGACCGTGGAGAAGTATTTCAATGTTATGATGCTGTGGAAT GAAGTCAAAAGGAAGGTTTCTGCGGAAGGGGAGACAAAGTTAAAACTAGATAGTAGCCTG GTTGACGCATTTCTGTATGCATTGGTCAAAGGGGGCTTCTTTGATGCAGTAATGCAAGTT GTGGAGAAATCTCAAGAGATGAAAATTTTTGTTGATAAATGGAGATATAAACAAGCATTC ATGGAGAAACATAAGAAGCTCAGAGTTTCAAAGTTAAGAAGGAAAAATCGCGGTAAAATG GAGGCACTTATTGCTTTCAAAAATTGGGCGGGTTTGAGTGCTTGA