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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g088630.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT2G20030.1)
Sequence

ATGAACATCCAAGTTAAGTCTCCCCCACTCCCAATGCCTTTCACCGCCACCGTCAACGGC
GGAGATGTTCCCAACACCGCCATTGATAACACTGCCCTTATCAACGATCAAACTCCTTCA
CCTTCCTCCTCCTCATCATCTTCTGCCACTTCGTCGTCCTTCGTTATAGTCGTTATTGTG
ATTGCCTCCGCTATTATAGTTTCTGCTTCAATATACCTCATCCTTCGACTTCTCTCCCGA
AGGTTCCACCGATCCTTCCGTACATACGCCACCGCCGATGATGTTGTATCGCATTCTTCT
TCTTCTGCTACTGCTGCGGCGGCGGTTACCGGAAATCGTTTGGAGAATCAAAGGAGTTCG
GAAGATGAGAAATTACTTGAATCGTTACCGCTTTTTAGTTTTCGTTCGGTTACTGGAAAT
TTAACTGGCGTGGATTGTGCTGTTTGTTTATCGAAGTTTGAGCCGGAGGATCAGTTACGT
CTGCTTCCCCTGTGTTTACACGCGTTTCACAGCGGTTGTATAGACGCGTGGCTTGTAACA
AACCAAACTTGTCCTCTCTGCAGGTCTACTGTGTATCCTACGGACGCAGATGTGCTCAGT
AAAGTGTTAGCGGCAGAAAACAACGACGCTCGCCCAGGGAATAATGAGCTACGGAATAGT
GGTAGTTTTCGGATTGAGTTCGGTAGTGTAAGTCGTCGACGTGGCGGTTCCGATTCACTC
GGTGGCGATGGTCAGAGATCGTACTCTATTGGCTCGTTTGAGTATATTGTGGATGACGGT
TACGAACTTTCCGTTGGCTCTATTCACCAAAGAGGTGCTTCTGAATGCACCGACAAGGAA
TCGATCGGAGTAGCAATACCGGCACCTCCTGGAGAAAGCATAGTTTCGGATGTTTCCGGT
GGTGGACGGAGTTGGCTTAGGGACTATGTTGATAGAATCGCTTCACTTTCTCTCTCATCT
CGCTCTGTATCATTTCGGAGCTCTGGAAGGTTTTTCAGCGGAAGTAGCCGGCGGAGCGAC
ACCGTCGTTCCCATTGACGATTTGGAAGCTGGCCGGGTTGGGGAGGAGATTAGCGAATTG
TTTCGATGGCTCTCAGGGGTATGA

Peptide Sequence

PEP ID

Solyc01g088630.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT2G20030.1)
Sequence

MNIQVKSPPLPMPFTATVNGGDVPNTAIDNTALINDQTPSPSSSSSSSATSSSFVIVVIV
IASAIIVSASIYLILRLLSRRFHRSFRTYATADDVVSHSSSSATAAAAVTGNRLENQRSS
EDEKLLESLPLFSFRSVTGNLTGVDCAVCLSKFEPEDQLRLLPLCLHAFHSGCIDAWLVT
NQTCPLCRSTVYPTDADVLSKVLAAENNDARPGNNELRNSGSFRIEFGSVSRRRGGSDSL
GGDGQRSYSIGSFEYIVDDGYELSVGSIHQRGASECTDKESIGVAIPAPPGESIVSDVSG
GGRSWLRDYVDRIASLSLSSRSVSFRSSGRFFSGSSRRSDTVVPIDDLEAGRVGEEISEL
FRWLSGV*

Transcript Sequence

Transcript ID

Solyc01g088630.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT2G20030.1)
Sequence

ATGAACATCCAAGTTAAGTCTCCCCCACTCCCAATGCCTTTCACCGCCACCGTCAACGGC
GGAGATGTTCCCAACACCGCCATTGATAACACTGCCCTTATCAACGATCAAACTCCTTCA
CCTTCCTCCTCCTCATCATCTTCTGCCACTTCGTCGTCCTTCGTTATAGTCGTTATTGTG
ATTGCCTCCGCTATTATAGTTTCTGCTTCAATATACCTCATCCTTCGACTTCTCTCCCGA
AGGTTCCACCGATCCTTCCGTACATACGCCACCGCCGATGATGTTGTATCGCATTCTTCT
TCTTCTGCTACTGCTGCGGCGGCGGTTACCGGAAATCGTTTGGAGAATCAAAGGAGTTCG
GAAGATGAGAAATTACTTGAATCGTTACCGCTTTTTAGTTTTCGTTCGGTTACTGGAAAT
TTAACTGGCGTGGATTGTGCTGTTTGTTTATCGAAGTTTGAGCCGGAGGATCAGTTACGT
CTGCTTCCCCTGTGTTTACACGCGTTTCACAGCGGTTGTATAGACGCGTGGCTTGTAACA
AACCAAACTTGTCCTCTCTGCAGGTCTACTGTGTATCCTACGGACGCAGATGTGCTCAGT
AAAGTGTTAGCGGCAGAAAACAACGACGCTCGCCCAGGGAATAATGAGCTACGGAATAGT
GGTAGTTTTCGGATTGAGTTCGGTAGTGTAAGTCGTCGACGTGGCGGTTCCGATTCACTC
GGTGGCGATGGTCAGAGATCGTACTCTATTGGCTCGTTTGAGTATATTGTGGATGACGGT
TACGAACTTTCCGTTGGCTCTATTCACCAAAGAGGTGCTTCTGAATGCACCGACAAGGAA
TCGATCGGAGTAGCAATACCGGCACCTCCTGGAGAAAGCATAGTTTCGGATGTTTCCGGT
GGTGGACGGAGTTGGCTTAGGGACTATGTTGATAGAATCGCTTCACTTTCTCTCTCATCT
CGCTCTGTATCATTTCGGAGCTCTGGAAGGTTTTTCAGCGGAAGTAGCCGGCGGAGCGAC
ACCGTCGTTCCCATTGACGATTTGGAAGCTGGCCGGGTTGGGGAGGAGATTAGCGAATTG
TTTCGATGGCTCTCAGGGGTATGA