Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g088600.3.1
CDS Infomation

Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic (AHRD V3.3 *** A0A199W3Y6_ANACO)
Sequence

ATGGCGAACATGAGGACGGCGATGGATGCAGCATTCTGGGACCTCAACATTTCAACACCG
AGAGCCCTAGACGGGACGGCTAGGTCCATTCCAGGGGAGCCTATACCACTTGATAGAAGC
ACAGCTAGTAAAGCTCTCAGAATCCAACAACTTTCTCTTCTCGGAAATGGATTTCCTCTC
GGAATCATTCCCTCTTATTCTCCAACTACCCGCAAGGAATTGGGCTCTTTTGCTCTTCAG
TCCCTTTTGTTTAAAGCTGCTACTTCTAACTGGTGGCTTGGATTCACAGGTCAGTTTCGA
CCAAAAAAACTGGTATCTGACATTAAAGCTGAGTTGTCCAGTGTGGATGAATGGGAGCTG
CCGATACTAAAAGACATTGGCAAGCATTTCTTGGAGAAGTCACTTTATGCCTTTGGTCTG
TGCTCACAGCTATCTCTGACACCCTCTTCTTCTCTGTTATTGAGCACGGAAAAGCATGGC
GAGAAGAAAGGACGCCGCTTGAGGGCCATGCTCTTTCATAAGCTTCCTGAGTACGACATT
ACTTTGGAAGCAGCATGGCCTGAGCTATTCTTAGACCATAAAGGTAGATATTGGGAGGTC
CCAGAGTCAATATCGTTGGACTGTTTATCGCTGGTTTCCGAGGATGGATTGCGATACCGA
TTTGGTTTACATAAAAATGGTGGCCATCCTCGGGCTGTTGATAACATTACTGACGAGCCA
CCACTCAGTCTGATGCAAGGAATATGTGGAAAAGCAGCCGTTTCTTATGAAAAGAGCAGA
GATTTCTGGAGAATCAAGGAAAAAAAAGAGGACATCATTATTGAAACAGATAAGGGACGG
ATTTATCGCCCTTCTTATGATATTCGTCTTAGAGAGCCTCATGCAGCAGTATCTGGAATT
ATTGGGGGAACTCTTGAGGCTTGGCTCAACAATGGTAGCAACAGTTCCTCGGCTTCGAAG
CATAGAAGTCCCTTTGCTGTTGATCTATTTGGTTCACTTTGCTGTACTTTTCAACATGGT
AAATTCAAAGAGTCCTTTGGAGACCTCACAAGGGTAGATGCTCGTCTAGATGTCTCATCT
GCTTTAGCGTTAACCAAACAGGTTTCAAAAGTCTTCAGAAAAGCATCATCTAATAATGCA
AGAGACGTGCTCTCTTCACCCAGACTCGAATTGATACTTCAGCAGCAGGTTGCTGGGCCA
ATTGTGTTCAGAGTAGATTCAAAGTTTTCGCTGAATTCACCAGCTGGCGTACAATTGGAA
GATTTTGTATGCAGTTTAAATTACTCGTTAAAGCTTCTAAAGTCTGGGAAAGTGGTAGCA
TGGTATTCCCCGAAAAGGAAAGAGGGAATGATTGAGTTACGACTATTTGAGTTTTAG

Peptide Sequence

PEP ID

Solyc01g088600.3.1
PEP Infomation

Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic (AHRD V3.3 *** A0A199W3Y6_ANACO)
Sequence

MANMRTAMDAAFWDLNISTPRALDGTARSIPGEPIPLDRSTASKALRIQQLSLLGNGFPL
GIIPSYSPTTRKELGSFALQSLLFKAATSNWWLGFTGQFRPKKLVSDIKAELSSVDEWEL
PILKDIGKHFLEKSLYAFGLCSQLSLTPSSSLLLSTEKHGEKKGRRLRAMLFHKLPEYDI
TLEAAWPELFLDHKGRYWEVPESISLDCLSLVSEDGLRYRFGLHKNGGHPRAVDNITDEP
PLSLMQGICGKAAVSYEKSRDFWRIKEKKEDIIIETDKGRIYRPSYDIRLREPHAAVSGI
IGGTLEAWLNNGSNSSSASKHRSPFAVDLFGSLCCTFQHGKFKESFGDLTRVDARLDVSS
ALALTKQVSKVFRKASSNNARDVLSSPRLELILQQQVAGPIVFRVDSKFSLNSPAGVQLE
DFVCSLNYSLKLLKSGKVVAWYSPKRKEGMIELRLFEF*

Transcript Sequence

Transcript ID

Solyc01g088600.3.1
Transcript Infomation

Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic (AHRD V3.3 *** A0A199W3Y6_ANACO)
Sequence

AGGTATCCACATTTTCCTTTTCCTTCACACTCTCCAACTTCGTTTTCTCCGGCCGACCGG
CGGGAGAGAAAAAAATGGCGAACATGAGGACGGCGATGGATGCAGCATTCTGGGACCTCA
ACATTTCAACACCGAGAGCCCTAGACGGGACGGCTAGGTCCATTCCAGGGGAGCCTATAC
CACTTGATAGAAGCACAGCTAGTAAAGCTCTCAGAATCCAACAACTTTCTCTTCTCGGAA
ATGGATTTCCTCTCGGAATCATTCCCTCTTATTCTCCAACTACCCGCAAGGAATTGGGCT
CTTTTGCTCTTCAGTCCCTTTTGTTTAAAGCTGCTACTTCTAACTGGTGGCTTGGATTCA
CAGGTCAGTTTCGACCAAAAAAACTGGTATCTGACATTAAAGCTGAGTTGTCCAGTGTGG
ATGAATGGGAGCTGCCGATACTAAAAGACATTGGCAAGCATTTCTTGGAGAAGTCACTTT
ATGCCTTTGGTCTGTGCTCACAGCTATCTCTGACACCCTCTTCTTCTCTGTTATTGAGCA
CGGAAAAGCATGGCGAGAAGAAAGGACGCCGCTTGAGGGCCATGCTCTTTCATAAGCTTC
CTGAGTACGACATTACTTTGGAAGCAGCATGGCCTGAGCTATTCTTAGACCATAAAGGTA
GATATTGGGAGGTCCCAGAGTCAATATCGTTGGACTGTTTATCGCTGGTTTCCGAGGATG
GATTGCGATACCGATTTGGTTTACATAAAAATGGTGGCCATCCTCGGGCTGTTGATAACA
TTACTGACGAGCCACCACTCAGTCTGATGCAAGGAATATGTGGAAAAGCAGCCGTTTCTT
ATGAAAAGAGCAGAGATTTCTGGAGAATCAAGGAAAAAAAAGAGGACATCATTATTGAAA
CAGATAAGGGACGGATTTATCGCCCTTCTTATGATATTCGTCTTAGAGAGCCTCATGCAG
CAGTATCTGGAATTATTGGGGGAACTCTTGAGGCTTGGCTCAACAATGGTAGCAACAGTT
CCTCGGCTTCGAAGCATAGAAGTCCCTTTGCTGTTGATCTATTTGGTTCACTTTGCTGTA
CTTTTCAACATGGTAAATTCAAAGAGTCCTTTGGAGACCTCACAAGGGTAGATGCTCGTC
TAGATGTCTCATCTGCTTTAGCGTTAACCAAACAGGTTTCAAAAGTCTTCAGAAAAGCAT
CATCTAATAATGCAAGAGACGTGCTCTCTTCACCCAGACTCGAATTGATACTTCAGCAGC
AGGTTGCTGGGCCAATTGTGTTCAGAGTAGATTCAAAGTTTTCGCTGAATTCACCAGCTG
GCGTACAATTGGAAGATTTTGTATGCAGTTTAAATTACTCGTTAAAGCTTCTAAAGTCTG
GGAAAGTGGTAGCATGGTATTCCCCGAAAAGGAAAGAGGGAATGATTGAGTTACGACTAT
TTGAGTTTTAGAATTTGTTTACTTTCCTATTGAATGTTTTGTTAGTGAGTGGTGTTCTTC
TCACTAATACTAAATGTTTTTTCTTCGCAAATGACCCTTGCATCTGATTCGCAGGCAATT
TTGTTCGTTCGGTAATACTATTCTCCTCACTTTTTAAGTTCTCATATGTTAGAATTCGCG
GACCAGAATATACTATTCTGGAGCGATAATACCAGTTTGGTGTTCTT