Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g088310.3.1
CDS Infomation

Geranylgeranyl reductase (AHRD V3.3 *** A0A097P6G1_SOLHA)
Sequence

ATGGCCGCCCAAACTTACTTTCATCTTCACTCTCTTCGATGTCTTCCAGTTCCACTCAAG
ATCCAAAACCCACAAAATCAAACCCATCGTTTCAAACGAAATCCAGTCGTCTGCAAGCTT
CGAGTAGCTGTAATCGGCGGCGGTCCAGCTGGATCTTCAGCTGCAGAAGCTTTAGCCACC
GGCGGAATCGAAACTTTCCTCTTTGAACGAAGCCCAGCTACAGCCAAGCCATGCGGCGGT
GCCATTCCACTATGCATGCTCGACGAATTCTCAATACCATTAAATCTCATCGATCGCCGT
GTCAGTCAGATGCGAATCGTTTCTCCATCAAATCTCGTCGTCGATTTCGGTAAAACCCTA
AAACCCCATGAATTCATCGCAATGCTCCGGCGAGAAGTGCTCGATTCATTCCTCCGGCAG
CGGGCTGAATCTAGCGGCGCCAATCTTCTCAAAGCACTGGTCACCAACCTCGTGGTCCCC
ACATCCTCACTCGAGCCGTACGTCATTCACTACACCATGGATAACTGCCAGCATCAGCTC
GCCGTCGATGCCATCATCGGCGCCGACGGAGCCAATAGCCGTGTAGCTAAATCGATCAAA
GCTGGAAATTACACTACTGCCATTGCTTTCCAAGAGAGGATCAAATTACCCGAGGACAAA
ATGGGGTATTACGAAAATTTAGCTGAGATGTACGTAGGGAATGACGTGTCGCCCGATTTT
TACGCGTGGGTCTTTCCTAAATGTGACCACGTGGCAGTGGGGACGGGCACGGTCTGCTCA
AAGTCCAATATCAAATCATTTCAACATGCTATCAGAGCACGGGCCAAATCAAAAATCGAA
GGAGGGAAAGTAATCAAAGTAGAGGCTCATCCCATACCAGAGCATCCGCGTCCCGTTAGG
GTCCGTGGACGGGTCGCTCTAGTAGGGGACGCAGCCGGATACGTAACAAAATGTTCGGGT
GAAGGAATATACTTTGCGGCAAAAAGCGGAAGAATATGTGGGGAAGCAATAGTTAAGGCT
TCAGAGGGTGGAGATAGCATGATCAATGAAGACGACCTGAAGAGGGAATATTTAAGGAAG
TGGGATGACAAGTATTTCACTACATTCAAGTTCTTGGATGTGCTACAAAAAGTGTTTTAT
GGTAATAACGCAGCAAGAGAAGCATTGGTGGAGTTGTGTGGAGATGAATATGTACAAAGG
ATGACATTTGATAGCTATTTGTATAAGAAATTAGCTAGTGGGAATAGGTGGGAAGATGCT
AAAATGGCGATGAACACAATTTCAAGTTTGGTTAGGTGTAACATTATGGGGAGAGAAGTG
GAAGCATCTGCACAAAAAATTCTCTCAAGAGTATAG

Peptide Sequence

PEP ID

Solyc01g088310.3.1
PEP Infomation

Geranylgeranyl reductase (AHRD V3.3 *** A0A097P6G1_SOLHA)
Sequence

MAAQTYFHLHSLRCLPVPLKIQNPQNQTHRFKRNPVVCKLRVAVIGGGPAGSSAAEALAT
GGIETFLFERSPATAKPCGGAIPLCMLDEFSIPLNLIDRRVSQMRIVSPSNLVVDFGKTL
KPHEFIAMLRREVLDSFLRQRAESSGANLLKALVTNLVVPTSSLEPYVIHYTMDNCQHQL
AVDAIIGADGANSRVAKSIKAGNYTTAIAFQERIKLPEDKMGYYENLAEMYVGNDVSPDF
YAWVFPKCDHVAVGTGTVCSKSNIKSFQHAIRARAKSKIEGGKVIKVEAHPIPEHPRPVR
VRGRVALVGDAAGYVTKCSGEGIYFAAKSGRICGEAIVKASEGGDSMINEDDLKREYLRK
WDDKYFTTFKFLDVLQKVFYGNNAAREALVELCGDEYVQRMTFDSYLYKKLASGNRWEDA
KMAMNTISSLVRCNIMGREVEASAQKILSRV*

Transcript Sequence

Transcript ID

Solyc01g088310.3.1
Transcript Infomation

Geranylgeranyl reductase (AHRD V3.3 *** A0A097P6G1_SOLHA)
Sequence

ATTATTTATTTGATAAGAGTTTAAATTTGAACCAATCGGATAAGGCAACATAATAAATAA
ATATTCAATGATTTTACTTTACTAGTACTATTAAAATTAAGGGCAAATATGAACCAAAAG
ATTAATATCGAAGCTATTTTTTGAATCAAAGTATTGACATCAGAGGTATTTGGAAGTTGA
AAGGTGGATGAAATTTAAGTCCCTTCTTCATTTTTTTAATAACTAGTTTTCGAACACGCA
CGTGTACTTCAGGCTAAGTAATAGTTTATTAAAATAATATAAGAATTAATTTTTGATAAG
TTATATAAACTTTTGAAAGGAATAGGTTACCTTGGCTGAATTAAACTTCAGAGTCCTTTC
ATATTCGAATTTAAAAGAAATAATTAGTTAAAATGTATATATAATATCAAATGTAACATG
ACAAGCTATTAAGATTAACACGCTTCATGCGATGCCACATTAAATTAGACAAAAAACTTC
AAACAATGAATGAATCCTCTAAAATATAAGTTCATCTACAATATATCATGTCATATATAA
TAAAAATTATCTATAATAATTCATGCAATTACTGAAAAATCATATCACTCAGTAAGGTTA
AACCCCAAACATTAAATATGATTAAAATAAACGAAAGTTCAGTTCTTTATACTAATCTTA
GCATCTTTACCGTTTAATTTGTTTATAAAGTCTCATTATAATTGACCTATCACCATTACC
AAATCTGAAACCTTTAATCCCTAAAAAGCCCCTTTTTATCAGCAATGGCCGCCCAAACTT
ACTTTCATCTTCACTCTCTTCGATGTCTTCCAGTTCCACTCAAGATCCAAAACCCACAAA
ATCAAACCCATCGTTTCAAACGAAATCCAGTCGTCTGCAAGCTTCGAGTAGCTGTAATCG
GCGGCGGTCCAGCTGGATCTTCAGCTGCAGAAGCTTTAGCCACCGGCGGAATCGAAACTT
TCCTCTTTGAACGAAGCCCAGCTACAGCCAAGCCATGCGGCGGTGCCATTCCACTATGCA
TGCTCGACGAATTCTCAATACCATTAAATCTCATCGATCGCCGTGTCAGTCAGATGCGAA
TCGTTTCTCCATCAAATCTCGTCGTCGATTTCGGTAAAACCCTAAAACCCCATGAATTCA
TCGCAATGCTCCGGCGAGAAGTGCTCGATTCATTCCTCCGGCAGCGGGCTGAATCTAGCG
GCGCCAATCTTCTCAAAGCACTGGTCACCAACCTCGTGGTCCCCACATCCTCACTCGAGC
CGTACGTCATTCACTACACCATGGATAACTGCCAGCATCAGCTCGCCGTCGATGCCATCA
TCGGCGCCGACGGAGCCAATAGCCGTGTAGCTAAATCGATCAAAGCTGGAAATTACACTA
CTGCCATTGCTTTCCAAGAGAGGATCAAATTACCCGAGGACAAAATGGGGTATTACGAAA
ATTTAGCTGAGATGTACGTAGGGAATGACGTGTCGCCCGATTTTTACGCGTGGGTCTTTC
CTAAATGTGACCACGTGGCAGTGGGGACGGGCACGGTCTGCTCAAAGTCCAATATCAAAT
CATTTCAACATGCTATCAGAGCACGGGCCAAATCAAAAATCGAAGGAGGGAAAGTAATCA
AAGTAGAGGCTCATCCCATACCAGAGCATCCGCGTCCCGTTAGGGTCCGTGGACGGGTCG
CTCTAGTAGGGGACGCAGCCGGATACGTAACAAAATGTTCGGGTGAAGGAATATACTTTG
CGGCAAAAAGCGGAAGAATATGTGGGGAAGCAATAGTTAAGGCTTCAGAGGGTGGAGATA
GCATGATCAATGAAGACGACCTGAAGAGGGAATATTTAAGGAAGTGGGATGACAAGTATT
TCACTACATTCAAGTTCTTGGATGTGCTACAAAAAGTGTTTTATGGTAATAACGCAGCAA
GAGAAGCATTGGTGGAGTTGTGTGGAGATGAATATGTACAAAGGATGACATTTGATAGCT
ATTTGTATAAGAAATTAGCTAGTGGGAATAGGTGGGAAGATGCTAAAATGGCGATGAACA
CAATTTCAAGTTTGGTTAGGTGTAACATTATGGGGAGAGAAGTGGAAGCATCTGCACAAA
AAATTCTCTCAAGAGTATAGATTGGCTTTGTGTTCAAGTCAACCTTTTCGAAAGGTCGAT
AACACTAGAGATTATGGTTCGTCAGTGACAAGATTTGACATATATTATGTAGCTGATGCG
TCAAGTATCTAAGAGTTATGTTGTGAAGTAACTGAAAAATATTAATGAAATATATTAACA
CGTCTTATTATTCTTTCTCATATTAATATGATAAAATTTCTTTAAATATTTCATTTTTCA
ATCGTTCTTGTCCCCTTTTCAAATATTCAATTTAGATTTGTATGGTTTCTGTATAAATCA
CGTCTATTGGTATTTTAGATTCTTTGATTGCATTTATATCAAAAATAAATGTTATGTTGT
AACTTGCCAAATATGATTTTTCAAAAATTAATCTAAATACTAATTTGTTACATTACTAAT
GTTATGTTACAC