Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g088250.3.1
CDS Infomation

SUN domain protein3
Sequence

ATGGCAAAGAAGAAGAGCTGGTTCAACTTGCTTAAGACATTTTTCGTTTCAGGATCTGAA
TCAAGATTAGACAAGGGGAAAAGAAAAAGATGGGTATTTACAAGGCTAAAGATTAGAAGA
TTGGTGGCGACCTCGGCGTTGTCACCACCAAGAGAAAGGAGACAACAGAAAACAGAAGAG
AAGCAGAACAAGCATGCTATAAATGTAGATGTTGAAACGATTAATGAATCGAATGTAGAT
GCTGAAAATGCAAAAGTTTATTTTAAAGAAGACATTGAGTCTATCCATGAGCCAAATAAT
GAAACTCTTGTATTGTCAAAACTGACAATTCATGGTGAAGAAACAAAATACTTTTACCTC
TATGAGAGAAGGATTGAAAATCTTGCTGCCATCAAAATTCAGACAGCATTTCGTGGTTAT
CTTGCAAGGAAAGCTTTGAGAGCACTAAAGGGACTAGTGAGGCTTCAAGCTATTGTTCGT
GGTAGGGCTGTTCGACGTCAGGCTATTGCTACACTTAGGTCCTTGCAGTCAATTGTAAAC
ATTCAATCTGAAGTATGTGCAAAGAGATGTGATAATCAGGTGAAAAGCACAGTACATTGT
CAAGAGAAAACGTTGATGGATCTCGGAGAGAAAGATATCAAGACAGAGCATCAACTTGCT
AGGATTGATCTAAACAGCCAGAAAAGGTGGGACAATCGATATTTATCTAAGGAAGAAGCA
AACAAGATGTTCTCAAGCAAAAGGGAGGCTGCGATCAAGAGAGAACGTATAAGAGAATAC
TGGTTAAGCCATCGAAGATCAACAGAATCAGACATAAATGGAAGAAGGCGATACTGGTTA
GAACAATGGGTAGATGCTCAGCTGGCTAAAAGAGATGACCTTAAAAACGTGGACACGCTT
TTCTCAGCAAGAAACAGAGAAGAATTCGAGAGAAAAGAAATGAAGCCAAAGCCTTCTCTA
AGACAATACCATACAGATCAAGAATTGGTTTCGCCAGTATATGTTCCAAGAAGATCATTT
CACCACAGAAGACAGAAATCAACTGGGGATCATGACAATACTTTCATGGGATCTCCTTCA
ATTCCAACTTACATGGCAGCCACGGAATCTGCAAAAGCAAAAGCAAGATCAATGAGTTCA
CCAAGGCTAAGACCAATCAATACTGATGTCTACTCTGAGATCAATTCTCCCTACAAGTAC
AAACTATCTCCCATATCTTCTATCAACAGCGATGCCACGGTCACAAGTAGAATGGGAAGT
GTTCCTGGCTTCTCACAAAGATCACCATGCTTAAAAGGAACACCTGGTCCCATAAAATCA
ACAAGGAGCATTAAGGACCTTAGCTTTGGATCAGATGGAGCATTTGCAAATTGGGATCGT
ATCGGCGCCTGCAGGTGA

Peptide Sequence

PEP ID

Solyc01g088250.3.1
PEP Infomation

SUN domain protein3
Sequence

MAKKKSWFNLLKTFFVSGSESRLDKGKRKRWVFTRLKIRRLVATSALSPPRERRQQKTEE
KQNKHAINVDVETINESNVDAENAKVYFKEDIESIHEPNNETLVLSKLTIHGEETKYFYL
YERRIENLAAIKIQTAFRGYLARKALRALKGLVRLQAIVRGRAVRRQAIATLRSLQSIVN
IQSEVCAKRCDNQVKSTVHCQEKTLMDLGEKDIKTEHQLARIDLNSQKRWDNRYLSKEEA
NKMFSSKREAAIKRERIREYWLSHRRSTESDINGRRRYWLEQWVDAQLAKRDDLKNVDTL
FSARNREEFERKEMKPKPSLRQYHTDQELVSPVYVPRRSFHHRRQKSTGDHDNTFMGSPS
IPTYMAATESAKAKARSMSSPRLRPINTDVYSEINSPYKYKLSPISSINSDATVTSRMGS
VPGFSQRSPCLKGTPGPIKSTRSIKDLSFGSDGAFANWDRIGACR*

Transcript Sequence

Transcript ID

Solyc01g088250.3.1
Transcript Infomation

SUN domain protein3
Sequence

TTATTGGATTCAACTAAATCGTATCTGGTCTTTTATTTATGCGTCAACATGACCAAAAAT
GCAAGCCATTTACTAATTAGAATTTTCTACACTTTCAAAACTCAAACCTAAAATCTCAAA
ATTTTAATATTAGAAAATCTAATCCAATCACACTACATCCCTCGTTAGTAAAAAAGCCAC
ATGTGGAAACAGGAGAAAGTCATCATAAAGATGATAGAGAAAAGAAATGTGAATTATTAT
TTTTGAATACATAAAAGAAAAGTATACACCTTACTCTAATGTCTTGTATTTCTACTGTTT
CCATCATGAAAAAGACTTCATTTATTTATTTTTCTTTGGTGGGACTTTTAAGGCTAGAGT
CCTAGTAGTTAAGTAGAGTTGCTTACTTGAGAAGATTTTGGTTATTTTTAGAAATGAATG
TGTGGAAAATCTATGATATCTTTTTGGTGTTAAATGCCTACTAATCTTAGTAAATTATCA
TAAAAAAAATAAATATGCTTCAATTCCCAAAGGCTCTGTTACCAATAGATCCTCTATTTT
AACAAGAAACTTCCCTTTTTGTATCCTTATGTTTAAATTACTCCCAAAAAGATTTTGTTG
CTTCATCCAAGTGTCATTCTTTGTTTAAATTACTCACATGAGGCAGTTCTAAAATTCATG
GCAAAGAAGAAGAGCTGGTTCAACTTGCTTAAGACATTTTTCGTTTCAGGATCTGAATCA
AGATTAGACAAGGGGAAAAGAAAAAGATGGGTATTTACAAGGCTAAAGATTAGAAGATTG
GTGGCGACCTCGGCGTTGTCACCACCAAGAGAAAGGAGACAACAGAAAACAGAAGAGAAG
CAGAACAAGCATGCTATAAATGTAGATGTTGAAACGATTAATGAATCGAATGTAGATGCT
GAAAATGCAAAAGTTTATTTTAAAGAAGACATTGAGTCTATCCATGAGCCAAATAATGAA
ACTCTTGTATTGTCAAAACTGACAATTCATGGTGAAGAAACAAAATACTTTTACCTCTAT
GAGAGAAGGATTGAAAATCTTGCTGCCATCAAAATTCAGACAGCATTTCGTGGTTATCTT
GCAAGGAAAGCTTTGAGAGCACTAAAGGGACTAGTGAGGCTTCAAGCTATTGTTCGTGGT
AGGGCTGTTCGACGTCAGGCTATTGCTACACTTAGGTCCTTGCAGTCAATTGTAAACATT
CAATCTGAAGTATGTGCAAAGAGATGTGATAATCAGGTGAAAAGCACAGTACATTGTCAA
GAGAAAACGTTGATGGATCTCGGAGAGAAAGATATCAAGACAGAGCATCAACTTGCTAGG
ATTGATCTAAACAGCCAGAAAAGGTGGGACAATCGATATTTATCTAAGGAAGAAGCAAAC
AAGATGTTCTCAAGCAAAAGGGAGGCTGCGATCAAGAGAGAACGTATAAGAGAATACTGG
TTAAGCCATCGAAGATCAACAGAATCAGACATAAATGGAAGAAGGCGATACTGGTTAGAA
CAATGGGTAGATGCTCAGCTGGCTAAAAGAGATGACCTTAAAAACGTGGACACGCTTTTC
TCAGCAAGAAACAGAGAAGAATTCGAGAGAAAAGAAATGAAGCCAAAGCCTTCTCTAAGA
CAATACCATACAGATCAAGAATTGGTTTCGCCAGTATATGTTCCAAGAAGATCATTTCAC
CACAGAAGACAGAAATCAACTGGGGATCATGACAATACTTTCATGGGATCTCCTTCAATT
CCAACTTACATGGCAGCCACGGAATCTGCAAAAGCAAAAGCAAGATCAATGAGTTCACCA
AGGCTAAGACCAATCAATACTGATGTCTACTCTGAGATCAATTCTCCCTACAAGTACAAA
CTATCTCCCATATCTTCTATCAACAGCGATGCCACGGTCACAAGTAGAATGGGAAGTGTT
CCTGGCTTCTCACAAAGATCACCATGCTTAAAAGGAACACCTGGTCCCATAAAATCAACA
AGGAGCATTAAGGACCTTAGCTTTGGATCAGATGGAGCATTTGCAAATTGGGATCGTATC
GGCGCCTGCAGGTGATCGATTGACTAAATTGAAAAATATAGATTGTAATGTAAAAGTTGG
AATGGTTTCATAATATCATATCTACACTAATAGTTTGTGTGAGTTTCCATCAGTTTCGTC
TGAATAAATCTCTTACTCAAGATATGCTACAAATTGAAGTTATGCAACTAGGGGTGACAA
GGGGGTTGATGTGGGTGCGGGGAGGGTTCAAGTTATTATTCTTTGCAAAATCATGCGGTT
GTGGGTTAAGGAAGTCGTAGTCTGCCAAGTAGATTGATCAGATGTTTATAGCGGAATAGT
AAGGCTTGCTGGAGTTAAGTATTGGTGTGAATGAGAAATGCGGAA