Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g087080.3.1
CDS Infomation

interferon-activable protein (AHRD V3.3 *** AT3G52110.2)
Sequence

ATGGAGATAGCTGTCATCGATTGGAAAACCATTGATTCAAGATTTGTTAAAGACGATCTT
TATGAGCATTTTAAAGCTCCTCAATGGGTCGATTTCTTCGCCCCCGATGCTCCAGTTGAT
GATGATGCTTGGTTCTGCAGACCTGAGTGTAATCATCCAAAGACAGTGGAAGATTTCTAT
AAAGTAGCTACCCCTTCCTCCTCTTCGAAGCTTCAAAGATCAGCTAGTGTATCTGATATT
CCTCTTGGGGAACGGAATAGGAGAGATGCAACATTGAAGAAGAGGGGGCTAATTCAACCG
TTGGTATCACTGAATAAGGATTATAAATGTGACAAGATTGTTGAAGATGGTGAAAATCAG
AATCCCAATTTTGCAACCCCTCCAAGGTTCAAGGCTAAATTGATGAAACAAACAATCAAG
TCGAGCGCGGAGAAGAAGCCAGTTGATGAAAAAGAGGAACATATACCAAAGCTGAAAAGT
ACTCTTTCAGCTAGGAATCTTTTTGCTGGTGGGGATTTGTTGAACAAAGTGTCTGAGTTT
TGCAATGAGCTGAAGAGATTAGTAGTTACCAGGACTAAAGAGAGAGAGAAGTGTGCAGAT
GAGAACTTGGAGACAAGTCCATTAATCTTTGATGATAAAGAAAGGGAAAGGAAGCCATTG
CTGGAGATGAATAAAGAGACTAATGAACTAGTGGCAAAGAGCAACACTAAGGACAAACAG
AGAAGGAAACTGAGAAATGATAATGCAGAAAACACACCAATACTTGTGGATGTGAAGAAC
ATTAAGCGCAGAGATGAAGAAATTTTGTCTCAGATCCGCACAAATCCTCCCACTCCTCAG
TGTTTCTCAGCCAGCCGGGGAGTTACAAAGGCTGCTCCATCTAAGCCTTTGAAATCTAGG
CCTCTGGAAACAAGAGGGATCCTTCAAGAGCTGGAACAAAGCAGCAATGAAGTGAAGAGA
AAGGAAGATCCAGGGAAGATGATGACTAGTAACAATAATCAACAAGGGCAGAGAGGTGGT
GGTGTTATTGTTGCTGAAAAAGAAGCTGCAAGAGCTTTGGATGTTTTCTGGTTCTTGAAG
CCTTGCACACTTGCCAGCTAA

Peptide Sequence

PEP ID

Solyc01g087080.3.1
PEP Infomation

interferon-activable protein (AHRD V3.3 *** AT3G52110.2)
Sequence

MEIAVIDWKTIDSRFVKDDLYEHFKAPQWVDFFAPDAPVDDDAWFCRPECNHPKTVEDFY
KVATPSSSSKLQRSASVSDIPLGERNRRDATLKKRGLIQPLVSLNKDYKCDKIVEDGENQ
NPNFATPPRFKAKLMKQTIKSSAEKKPVDEKEEHIPKLKSTLSARNLFAGGDLLNKVSEF
CNELKRLVVTRTKEREKCADENLETSPLIFDDKERERKPLLEMNKETNELVAKSNTKDKQ
RRKLRNDNAENTPILVDVKNIKRRDEEILSQIRTNPPTPQCFSASRGVTKAAPSKPLKSR
PLETRGILQELEQSSNEVKRKEDPGKMMTSNNNQQGQRGGGVIVAEKEAARALDVFWFLK
PCTLAS*

Transcript Sequence

Transcript ID

Solyc01g087080.3.1
Transcript Infomation

interferon-activable protein (AHRD V3.3 *** AT3G52110.2)
Sequence

GATTTTATTAATTTTAATAATAATTTTGTTTGATTTAATAAAAAGAAAGTCTATTTTGTA
CTCTATCATGTAGCCTTTTTTATTCCTAAAAAATAGCATATAAAATAGAAGGCTAAGAGG
GAGATAATGAAATTATGTGATTGAATTTTCCAAAACCAAAGGAATAACACCCACCCCAAA
TTCCTTTTTTGTTAACTGATCTATCTAATGGTTCAACAAACAATTAATTATAATATATCT
TTAAATTTTAAATAACAAATAAAATACTAGACTAAGATTCTAAATAAAGGAGGATAAATA
AATTGAACCCTATTTTATTTAAAACGTCAATCAATTATGTGCTTCAATATAAGAATCGAG
AGTAAACGCTATAGCTTGTTTCCATATTCAACAGCATGATCGAACTAAAATTTTGCGATT
TCAAAGTCTCTCCATTGAATAGCTTGTTCTCCCCAATAGGATAGATAGTTCAATTCCTTA
TAGCTTGTTCTCCCCAATAGGATAGATAGTTCAATTCCTTCCCTTAGAACTGTACTTAAA
ATATTTTTAGTCAATTCGGATGGGAAGGAGGGCAAAACGGTCAAGAGAGTAGATTTGGAG
ACGGTGGGTTCACGGGGATGAAACCACATACTTAAAAATTACTTACAAGTTAGAAACTTG
TTTCTCGATATTAAAAAAGTCATTTTGCTTATTTTGAAGGAGTTATTTTTGCTATGTAAA
AAATATTTCGCCGTACCACACCCCAGATCCACAGGTAAATACGTTTTAGACCATTGTAGT
TAGATCTGGAGTTAATTCCCATTGATTAAAAACTCAGCAAAATAAATAATAAATAAATAA
ATAAAAGAGAAAAAATTCTCTAACGGTCAAAAAAAAAAAACCAAAAAGAAAGGCTCAAAA
TCCCAACGGTCTTGTTAAAATCTCTTTGTTGTCAGCTCCTTCAACAACAAAGAAACGTTG
CATTTTCACCTGTGAATTCATTTTTATTCCTCCAAATTTTATCTGGGTTTTGTACATACT
CTGTTCATTCTTCAAGAACCATGGAGATAGCTGTCATCGATTGGAAAACCATTGATTCAA
GATTTGTTAAAGACGATCTTTATGAGCATTTTAAAGCTCCTCAATGGGTCGATTTCTTCG
CCCCCGATGCTCCAGTTGATGATGATGCTTGGTTCTGCAGACCTGAGTGTAATCATCCAA
AGACAGTGGAAGATTTCTATAAAGTAGCTACCCCTTCCTCCTCTTCGAAGCTTCAAAGAT
CAGCTAGTGTATCTGATATTCCTCTTGGGGAACGGAATAGGAGAGATGCAACATTGAAGA
AGAGGGGGCTAATTCAACCGTTGGTATCACTGAATAAGGATTATAAATGTGACAAGATTG
TTGAAGATGGTGAAAATCAGAATCCCAATTTTGCAACCCCTCCAAGGTTCAAGGCTAAAT
TGATGAAACAAACAATCAAGTCGAGCGCGGAGAAGAAGCCAGTTGATGAAAAAGAGGAAC
ATATACCAAAGCTGAAAAGTACTCTTTCAGCTAGGAATCTTTTTGCTGGTGGGGATTTGT
TGAACAAAGTGTCTGAGTTTTGCAATGAGCTGAAGAGATTAGTAGTTACCAGGACTAAAG
AGAGAGAGAAGTGTGCAGATGAGAACTTGGAGACAAGTCCATTAATCTTTGATGATAAAG
AAAGGGAAAGGAAGCCATTGCTGGAGATGAATAAAGAGACTAATGAACTAGTGGCAAAGA
GCAACACTAAGGACAAACAGAGAAGGAAACTGAGAAATGATAATGCAGAAAACACACCAA
TACTTGTGGATGTGAAGAACATTAAGCGCAGAGATGAAGAAATTTTGTCTCAGATCCGCA
CAAATCCTCCCACTCCTCAGTGTTTCTCAGCCAGCCGGGGAGTTACAAAGGCTGCTCCAT
CTAAGCCTTTGAAATCTAGGCCTCTGGAAACAAGAGGGATCCTTCAAGAGCTGGAACAAA
GCAGCAATGAAGTGAAGAGAAAGGAAGATCCAGGGAAGATGATGACTAGTAACAATAATC
AACAAGGGCAGAGAGGTGGTGGTGTTATTGTTGCTGAAAAAGAAGCTGCAAGAGCTTTGG
ATGTTTTCTGGTTCTTGAAGCCTTGCACACTTGCCAGCTAAAAGGTTCAAGCCACACACC
ACTGTTGCTGAACAAACATTTCATGAAGTGCTTACTCCTCCATACTTGAAAAAGTTGTCA
TTTTGTTTTTCCATATTCTTTCATTCTTTATAGTTTCTGATACACTCAATCAATCTATGA
GTTTTTTTACCCCCTTCTGTGAGGAAAATAAGTTGTAAGAAAACAGTTCAAAGGTCCAGA
ATATTAAATAACATTATCCTTTTATTGATGGAAAAAGTTTATTTTTAGAATATATATATC
TATTAGAAAGATAAGATTGTGATTGATTCTTGCCATGAGAACCTAAAAAGCTCTCAGCTT
TATCTCCATCTCCATTTATTTTTATCATGAAAAAGAACCCCACAGCAGAAAAAGGAGTCC
CCCCCTCATCTTTTTCACTTGGCAATAATTCTCTTGGAACAGTGATAAGCCAAAACAGCA
ATATTCAGATCTTGTTTGTCTTAACAAAACATTATAAACTAATTTTGAATTATGCATAGA
AACAAAAACAATTGCAACCAATAATTACCCTTTCTTTATTAATGCACTTTGATTTAACAT
GAACCATCAAATCTCTGAAACAAAAAAACAAAGCCTTGCAGAGAGAACCACCAAACAAAT
CCACAAACCCAGAGTTATATTGTAAGGCTGAAACTTGAAAATTGAAAAAAAAAACATATT
ATTTACAGAGGGGGTTCAAGTTTAGTGAATCTTGAATAAATCTACCTTGTAGTGACACAA
AACATACAATTCAAGAACCTAGCCCAAACATGTCGTAGCCTTGGATACATCCTTCCTGTA
TAAACACTTGATTCCCTACAAAGATCCTCCATAGTTTCCACAAAAAGATTCAAGCTTCTC
ATCGGAGGTATATACAGAGTCAAAGGCACTGCAGAAAACGCCACTGCAAAGAACAAGTGC
AGCATCTCCACTTAAAACCAAAAAGATTGATTTTTTTTTTCTTCAAAAAGCTAACAACTT
TGGATTTTCTTGAGAAAATCAAGAAAAGGGGGTTTTGTAATGAGATTTTTGGAGGATTGT
TGTAGTTGTGGTTTTGGTGAATGATTTTGGGGGATTGAGATTTGGATGAACTTGGACCAA
TTTTGTTCATA