Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g087050.3.1
CDS Infomation	Protein TRANSPARENT TESTA 1 (AHRD V3.3 *** A0A0B2QDT4_GLYSO)
Sequence	ATGACAGAACCCTATTATAATTTCTTCACAGGATGGTTCAACTTTCTTCCTCTTCATCAA CAATATATTTCATCTTGCTACAACAAAGAAATTGCACCTTCTTCACCACCACTAAGAGAA GCTCTTCCACTTCTCAGTAATAATAATAATAAGTATTCTTGTGAGAGTAGTAGTACTACT TTTTCTCATGAGGAAAATACTACTACAACTAATTATTATAATGAAAATGTGAGTGTATCT CTACATATAGGGCCGCCAAATTCATGTGAAGGAGTAGTAGATAGTGGAGGAAATAAAGAA GAAGATCAATTTGATGTGGTTTCTAATGATAATAACAATACATCATCAACAACACTAAAT AAGGGACAATATTGGATCCCTACTCCTTCTCAAATTCTCATTGGTCCAACACAATTCTCT TGCCATCTTTGCTACAAGACTTTCAATAGATACAACAATCTTCAGATGCATATGTGGGGA CATGGATCTCAATACAGAAAAGGTCCAGAATCATTAAGAGGTACACAACCAAGTGCAATG TTAAGGCTACCATGTTACTGTTGTGCACCTGGTTGTAAACACAACATTGATCACCCAAGA GCAAGGCCATTAAAAGACTTTAGAACACTTCAAACACATTACAAGAGGAAGCATGGTGCT AAGCCTTTCATGTGTAGAAAATGTGGTAAGCCATTTGCTGTGAAAGGTGATTGGAGAACT CATGAGAAGAATTGTGGTAAGATTTGGTATTGTATTTGTGGATCTGATTTTAAGCATAAG AGGTCTCTAAAAGACCATATTAAGTCATTTGGACGCGGTCATGGCGCAGTTGGGGTACCT AATCTTGAAGAACTAGAGGAAGAATCAAACTCTGAGATTGAACAAGATTTAATGTAA

Peptide Sequence

PEP ID	Solyc01g087050.3.1
PEP Infomation	Protein TRANSPARENT TESTA 1 (AHRD V3.3 *** A0A0B2QDT4_GLYSO)
Sequence	MTEPYYNFFTGWFNFLPLHQQYISSCYNKEIAPSSPPLREALPLLSNNNNKYSCESSSTT FSHEENTTTTNYYNENVSVSLHIGPPNSCEGVVDSGGNKEEDQFDVVSNDNNNTSSTTLN KGQYWIPTPSQILIGPTQFSCHLCYKTFNRYNNLQMHMWGHGSQYRKGPESLRGTQPSAM LRLPCYCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGAKPFMCRKCGKPFAVKGDWRT HEKNCGKIWYCICGSDFKHKRSLKDHIKSFGRGHGAVGVPNLEELEEESNSEIEQDLM*

Transcript Sequence

Transcript ID	Solyc01g087050.3.1
Transcript Infomation	Protein TRANSPARENT TESTA 1 (AHRD V3.3 *** A0A0B2QDT4_GLYSO)
Sequence	ATTTTTTTCTCTAAGTTTTGAGTATGACAGAACCCTATTATAATTTCTTCACAGGATGGT TCAACTTTCTTCCTCTTCATCAACAATATATTTCATCTTGCTACAACAAAGAAATTGCAC CTTCTTCACCACCACTAAGAGAAGCTCTTCCACTTCTCAGTAATAATAATAATAAGTATT CTTGTGAGAGTAGTAGTACTACTTTTTCTCATGAGGAAAATACTACTACAACTAATTATT ATAATGAAAATGTGAGTGTATCTCTACATATAGGGCCGCCAAATTCATGTGAAGGAGTAG TAGATAGTGGAGGAAATAAAGAAGAAGATCAATTTGATGTGGTTTCTAATGATAATAACA ATACATCATCAACAACACTAAATAAGGGACAATATTGGATCCCTACTCCTTCTCAAATTC TCATTGGTCCAACACAATTCTCTTGCCATCTTTGCTACAAGACTTTCAATAGATACAACA ATCTTCAGATGCATATGTGGGGACATGGATCTCAATACAGAAAAGGTCCAGAATCATTAA GAGGTACACAACCAAGTGCAATGTTAAGGCTACCATGTTACTGTTGTGCACCTGGTTGTA AACACAACATTGATCACCCAAGAGCAAGGCCATTAAAAGACTTTAGAACACTTCAAACAC ATTACAAGAGGAAGCATGGTGCTAAGCCTTTCATGTGTAGAAAATGTGGTAAGCCATTTG CTGTGAAAGGTGATTGGAGAACTCATGAGAAGAATTGTGGTAAGATTTGGTATTGTATTT GTGGATCTGATTTTAAGCATAAGAGGTCTCTAAAAGACCATATTAAGTCATTTGGACGCG GTCATGGCGCAGTTGGGGTACCTAATCTTGAAGAACTAGAGGAAGAATCAAACTCTGAGA TTGAACAAGATTTAATGTAAATCATTGTTTACAGTTCAGTGCTAAGAACTTTAAAGGTCG AAGACTTTTGTAACGAGCTATATGTTGACTTTGCTTTTGTTATGATATTCAAATTAAAGT TCGTTCTATTTTTATTTTATTTTGGATGAGAAATGTAAGGTTTGTGTAAATGATTTTTTC TTTTCTTTCTAGCTATGTAATATAAAGATGTGTATTGTTTCAGTGTTTACTAAGTTTTCT TCTTAATTGTTAGGAAAAATATAAGGTTGAGAATATGCGTTGGCAAAATATGTTAATTAG GGTTTGTCATGTGAAGAAAATGAATCTTCCTCTTTCT