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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g087040.2.1
CDS Infomation

PsbP-like (AHRD V3.3 *** A0A0U9HL69_KLEFL)
Sequence

ATGGCAAGTATTCTCCACCCCTCATCCCTCCTTTCCTCCTCCTCTTCCACCACCACCACC
ACCACAAAACCACCAGTATCACCACCCTTTTCCAGACCCCAATCCACCTTATCACCACCC
TCTAAACCCCTTTTAACCACACTAACCGCCACAGCAATAGCCACCACAATACTAACGACC
TCTCTCCCTTCTTTAGCAGATTCCCCCTCCAGCTTCAACATTTACTACGGTACAGCTGCT
AGCGCCGCCAATTACGGCGGCTACGGAGGAAATTCCGATAAGAAGGCGTCGGCTGAGTAT
ATTTACGACGTCCCCGATGGGTGGAAAGAGCGTCTGGTGTCGAAAGTTGAAAAGGGCACA
AATGGAACAGATAGTGAGTTTTATAACCCGAAGAAGAAATCTGAGAAAGAGTACCTTACT
TATCTTGCTGGGTTTAGGCAATTAGCGCCTAAAGATGTAATTCTGAATAACTTAGCTTTA
TCTGATGTGAATTTGCAAGATTTAATTGCTAATGCTGATGGGGTTACTTCAGAAGAGAGA
AAAGATGAAAATGGGCAATTGTATTATGATTATGAAATTGATGGTGTTCTTGGTCATAGC
TTGATCTCTGTTACTTGTGCTAATAATAAATTGTATGCTCATTTCGTCAATGCGCCGGCG
CCGGAATGGAAGAAGGATGAAGGCATCCTGAGGCACGTCCATCAGTCTTTTAAAACGGTT
GGGTAA

Peptide Sequence

PEP ID

Solyc01g087040.2.1
PEP Infomation

PsbP-like (AHRD V3.3 *** A0A0U9HL69_KLEFL)
Sequence

MASILHPSSLLSSSSSTTTTTTKPPVSPPFSRPQSTLSPPSKPLLTTLTATAIATTILTT
SLPSLADSPSSFNIYYGTAASAANYGGYGGNSDKKASAEYIYDVPDGWKERLVSKVEKGT
NGTDSEFYNPKKKSEKEYLTYLAGFRQLAPKDVILNNLALSDVNLQDLIANADGVTSEER
KDENGQLYYDYEIDGVLGHSLISVTCANNKLYAHFVNAPAPEWKKDEGILRHVHQSFKTV
G*

Transcript Sequence

Transcript ID

Solyc01g087040.2.1
Transcript Infomation

PsbP-like (AHRD V3.3 *** A0A0U9HL69_KLEFL)
Sequence

TAAGCCAAAAAAATTTCACAAACAATCCACATGGCAAGTATTCTCCACCCCTCATCCCTC
CTTTCCTCCTCCTCTTCCACCACCACCACCACCACAAAACCACCAGTATCACCACCCTTT
TCCAGACCCCAATCCACCTTATCACCACCCTCTAAACCCCTTTTAACCACACTAACCGCC
ACAGCAATAGCCACCACAATACTAACGACCTCTCTCCCTTCTTTAGCAGATTCCCCCTCC
AGCTTCAACATTTACTACGGTACAGCTGCTAGCGCCGCCAATTACGGCGGCTACGGAGGA
AATTCCGATAAGAAGGCGTCGGCTGAGTATATTTACGACGTCCCCGATGGGTGGAAAGAG
CGTCTGGTGTCGAAAGTTGAAAAGGGCACAAATGGAACAGATAGTGAGTTTTATAACCCG
AAGAAGAAATCTGAGAAAGAGTACCTTACTTATCTTGCTGGGTTTAGGCAATTAGCGCCT
AAAGATGTAATTCTGAATAACTTAGCTTTATCTGATGTGAATTTGCAAGATTTAATTGCT
AATGCTGATGGGGTTACTTCAGAAGAGAGAAAAGATGAAAATGGGCAATTGTATTATGAT
TATGAAATTGATGGTGTTCTTGGTCATAGCTTGATCTCTGTTACTTGTGCTAATAATAAA
TTGTATGCTCATTTCGTCAATGCGCCGGCGCCGGAATGGAAGAAGGATGAAGGCATCCTG
AGGCACGTCCATCAGTCTTTTAAAACGGTTGGGTAATATGAGATTGTAATTGTAACTGTC
TATAGAAAAAAGAGTTTCGGAATTTGTAATAAGATTGAGATACTCAATGTAATCACTATC
TCCTCATATGGATTTTGGTATCTGAGTTGTTTTTGTGTGTTGCAGTGTTGGTCTCTATCT
GTACATTACCTTTACAATGAACTTGCATCTTGTATGCAGTGTTCACCAATCTGAGATGTC
CATTTGCAT