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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g086840.3.1
CDS Infomation

Thaumatin-like protein (AHRD V1 ***- Q5DWG1_CRYJA)%3B contains Interpro domain(s) IPR001938
Sequence

ATGGAATCACATTTCCACCTAGTTCTCATCCTTCGACTTCTCTTTTTCATCGGTGGAGAT
TGTGCAGTTTTCACATTGAAAAACAATTGTAATGTGACAATATGGCCAGGAAGTTTATCA
GGAGCAGGTCATCCCTTGCTATTTAGCGGAGGTTTAGAATTGCAACCATATGAGACTACA
CAAATTGATGCATCTACTGGTTGGTCAGGTCGTTTCTGGGCACGAACCCACTGCCAATTT
GACACATCAGGTAAAGGGACATGTGCCACAGCAGACTGCGGCGGAGTACTCCAATGCAAT
GGTGCTGGTGGCACTCCACCAGCCTCATTAGCAGAGTTCACACTTGATAGTCCAATGGAT
TTCTATGATGTTAGCTTTGTTGATGGTTTCAATATCCCAATATCAGTTTACCCTTCATGT
GGAACTGGAAATTGTTCAAATATACAATGTTCTTCAGACATAAACTTACAATGTCCTCAA
GAATTACAATTGAAAACATATGATGGTACAACTGTTGCATGTAAAAGTGCATGTTTTGCT
TTTAATAAACCAGAGTATTGTTGCACTGGGGAATTCAACAATCCCACCACATGTAAACCT
ACAGAGTACTCACAATATTTCAAGAGTAGTTGTAAAGATGCTTATAGTTATGCTTATGAT
GATGCAACTAGTATTTTTACATGTAAGGGGGCTAATTATTTGATCTCATTTTGTTGA

Peptide Sequence

PEP ID

Solyc01g086840.3.1
PEP Infomation

Thaumatin-like protein (AHRD V1 ***- Q5DWG1_CRYJA)%3B contains Interpro domain(s) IPR001938
Sequence

MESHFHLVLILRLLFFIGGDCAVFTLKNNCNVTIWPGSLSGAGHPLLFSGGLELQPYETT
QIDASTGWSGRFWARTHCQFDTSGKGTCATADCGGVLQCNGAGGTPPASLAEFTLDSPMD
FYDVSFVDGFNIPISVYPSCGTGNCSNIQCSSDINLQCPQELQLKTYDGTTVACKSACFA
FNKPEYCCTGEFNNPTTCKPTEYSQYFKSSCKDAYSYAYDDATSIFTCKGANYLISFC*

Transcript Sequence

Transcript ID

Solyc01g086840.3.1
Transcript Infomation

Thaumatin-like protein (AHRD V1 ***- Q5DWG1_CRYJA)%3B contains Interpro domain(s) IPR001938
Sequence

ATTGGTGAAAATAAAATCTACCATTGATTTCATTTACTTAGTCAAAATCAATCACTTCTA
TTTTTGTACGATTTTACCAAATAAAATAAAATAAATAGATCTATCTAGGCATGTGAAGCT
AATCTTGTCTAAAATTCATTTATAGATACAACATCTAAGTTCACTTCATCTCTCAAACTT
ATATATACACCATCAATTTCAACATCCGAATTGTCAAAAAGGAAATTAGTTTATAATCAT
CAATATGGAATCACATTTCCACCTAGTTCTCATCCTTCGACTTCTCTTTTTCATCGGTGG
AGATTGTGCAGTTTTCACATTGAAAAACAATTGTAATGTGACAATATGGCCAGGAAGTTT
ATCAGGAGCAGGTCATCCCTTGCTATTTAGCGGAGGTTTAGAATTGCAACCATATGAGAC
TACACAAATTGATGCATCTACTGGTTGGTCAGGTCGTTTCTGGGCACGAACCCACTGCCA
ATTTGACACATCAGGTAAAGGGACATGTGCCACAGCAGACTGCGGCGGAGTACTCCAATG
CAATGGTGCTGGTGGCACTCCACCAGCCTCATTAGCAGAGTTCACACTTGATAGTCCAAT
GGATTTCTATGATGTTAGCTTTGTTGATGGTTTCAATATCCCAATATCAGTTTACCCTTC
ATGTGGAACTGGAAATTGTTCAAATATACAATGTTCTTCAGACATAAACTTACAATGTCC
TCAAGAATTACAATTGAAAACATATGATGGTACAACTGTTGCATGTAAAAGTGCATGTTT
TGCTTTTAATAAACCAGAGTATTGTTGCACTGGGGAATTCAACAATCCCACCACATGTAA
ACCTACAGAGTACTCACAATATTTCAAGAGTAGTTGTAAAGATGCTTATAGTTATGCTTA
TGATGATGCAACTAGTATTTTTACATGTAAGGGGGCTAATTATTTGATCTCATTTTGTTG
ATTTGAAATATACAAATGGCAAGTTTGGTGGCTACTTTGTTTAGGGTTCTATTGCACAAG
TTTGTGGATTCAAGAAATACCTTATTGAATAGGGCAATATGTGTGGATGAATATTGATAC
ATACATGAAAATCATGTGAGTTCATAAGTGGAATAAAAAAATAATTATATTAGTTACTTT
TGAAGGAATGAAGGATAATACTTGTTTTCAATAAACTATGAGTTCAAGATTTTCTTTACT
AA