Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g086720.3.1
CDS Infomation	C2 domain-containing family protein (AHRD V3.3 *** B9GFS0_POPTR)
Sequence	ATGAAGTTAATAGTAGAAGTAATAGATGCTTATGATCTTATGCCAAAAGATGGTGAAGGA TCAGTAAGTGCATTTGTAGAAGTTGATTTTGAAAACCAACTTAGCAAAACTAGAACTGTC CCAAAAAATCTCAACCCCACTTGGAACCATAAACTCATTTTCCATCTTGACGATATAAAG AATCATCGATACAAATACATTGATGTTTCTGTGTATCATGAGAGAAGGCCTATTCCAGGG AGAAACTTTCTTGGAAGGGTGAGAATTCCTTGCTCAAATATAGTCAAGAAAGGGGAAGAA GTTTATCAAAGATTCCAACTTGAAAAGAAATGGTTTTCCTCATTTGTTAAAGGAGAGATT GGCCTCAAAATATATATTTCATCACCATCTGATCCAAATTTATATCCTAAAAAATCTCCT AGTCCTTCAAATATCCCGTCCATCGAAAATCCAGAACAGTTAGATAATCCACCACCTTCA CTTCCTGCTTCTGAAGTTTCTACTCTTGATACTCCTAAAGATAGTAACAGTTCAGAAGTA CAAAACACTGAAAACACTGCAATTTCTGGTGCTGATCAGTCTTCAAGCTTTGCTGTAGTA GAAAAAACTGGTCATCTTACTCCAAGTGAGCAGGACACAGAATCAGTTGAGCACATTGAA GAAACATCTCAATTTGTATTCAAGCATCAAGCTATGCAGCAACCAGTCATATCAATAAGG AAGAGACCAGGTTTCCAACCGACAATGCAGCATGGGGTAGACCACCCCCGAGCTATTCCT AGCCACCAAGGTGTCCAACTGCCAATCCATCATCAAGTAGACCACCCCCGAGCTATTCAT GGCCAGCCAGGTGTCCAACCGCCAATGCAGTATCAAGTAGCCCAATCCCGAGCTATGCAT AACCACCCTAAAGATGACTATGAGCTGAAGGACACGAATCCTCAGCTTGGGGAGCAATGG CCACGTGTTGGAGGTTACGGAGGAAGAGGATGGATGAACAGTGATAGACATGCAAGCACA TACGACCTTGTGGAGCAGATGTTTTATCTTTATGTTCGAGTGGTTAAGTCCAAAGATCTT CAACCAAGTGTACTCACCGGTAGCTGTGACCCATATGTGGAGGTGAAGATGGGGAATTAC AAAGGACGGACAAAGCATTTTGATAAGAAAATGAATGCAGAATGGAACCAGGTATTTGCT TTCTCTAAAGATCGAATTCAGTCTTCAGTTCTTGAAGTTTATGTGAAGGATAAAGATATG ATGGGAAGAGATGATAATCTTGGAAAGGTGGTTTTTGACTTGAATGAGGTCCCAACAAGA GTTCCTCCTGATAGTCCCCTGGCTCCTCAATGGTACAGACTGGAGGATCAACGAGGAGAA GGAAAAATAAGAGGGGAGATCATGCTTGCTGTTTGGATGGGAACACAAGCAGATGAAGCA TTTTCAGATGCCTGGCATGCCGATGCTGCCTTTGTTCATGGAGAGGGGGTAATGAGCGTC AGGTCCAAAGTTTATGTCTCTCCAAAACTTTGGTACGTGAGAGTAAATGTTATTGAAGCT CAAGACATCATCCCAAATGACCAGAGCCGTCTCCCTGAAATTTTTGTGAAAGCTCAGGTG GGAAATCAGGTTCTCAAAACCGATATATGCCCTGCTCGAACAGCAAATCCAATGTGGAAT GAGGATTTGGTTTTTGTAGCTGCTGAGCCTTTTGAGGAGCAGCTAGTCCTCAGCATTGAG GACCGTGTTCACCCAATGAAAGATGAGATTCTTGGAAAGATAAGTTTCCCACTCAACACA TTCGAGAAGAGGCTTGATCACAGGCCGGTCCATTCTCGCTGGTTCAACCTTGAGAAGTTT GGTTTTGGTTCCTTGGAAGTTGACAGGAGGAAAGAGCTCAAGTTTTCAAGCAGAGTTCAC CTCAGAGTATGCCTTGAAGGGGGATATCACGTGCTGGATGAATCAACCATGTACATAAGT GATCAAAGGCCAACAGCACGACAGCTGTGGAAACCACCGGTGGGAATATTGGAAGTTGGC ATATTAGGTGCAGAAGGACTTCTTCCGATGAAGATGAAGGACAGCAGAGGAAGCACAGAT GCCTATTGTGTGGCTAAATATGGTCAGAAATGGGTAAGGACAAGAACCATTCTCGACACT TTCAGCCCCAAATGGAATGAGCAATACACTTGGGAAGTTTATGATCCTTCCACAGTTATC ACATTGGGTGTCTTTGATAACTGTCATTTGGGGGTTGAGAAGCAAGGGACTGGAGCAGCA CGAGACTCACGCATAGGGAAGGTACGTATCAGATTATCAACGTTAGAATCTCATCGAATT TACACTCACTCTTATCCCCTTCTTGTTCTGCACCCATCAGGGGTTAAGAAAATGGGGGAA CTCCAATTGGCAGTAAGATTCACAAGCCTCTCTTTAGCCAACATGATACATACTTATGGC CACCCTTTGCTTCCCAAAATGCACTACCTTCATCCCTTTACTGTCAACCAAGTAGACAAC TTGAGGTACCAAGCTATGAGCATTGTTGCTGTTAGACTGGCTAGAGCTGAACCACCACTC AGGAAAGAAGTTGTAGAGTACATGCTAGATGTGGATTCCCACATGTGGAGTATGAGAAGA AGCAAGGCTAATTTCTTTAGGATCATGTCACTTCTTTCAGGCTTAATCTCTGTTAATCGA TGGTTTGGTGATATATGTCACTGGAAAAATCCAGTCACCTCAGTCTTGGTTCACATCCTC TTCCTGATACTGATCTGGTATCCGGAGTTGATTCTTCCAACTCTGTTTCTCTATATGTTC CTCATTGGACTGTGGAACTATCGATTCCGGCCAAGGCACCCTCCTCACATGGACACTAAG CTTTCATGGGCTGAAACAGCTCACCCTGATGAGCTTGATGAAGAATTCGACACGTTTCCA ACGTCTAGACCCCACGACATTGTTCGAATGAGGTACGATAGGCTGAGAAGTGTTGCTGGG AGGATTCAGACCGTGGTCGGTGACATAGCAACACAAGGAGAGAGGCTGCAGGGGGTGCTA AGCTGGAGAGATCCAAGAGCAACAAGCTTGTTTATCATGTTCAGTCTTTTCGCTGCAGTT ATGCTTTATGTGACTCCCTTCAGAGTGGTGGCTTTAGTTGCTGGGTTATATATGTTGAGG CACCCCAGGTTCAGAAGCAAGATGCCTTCTGTTCCCAGCAACTTCTTCAAGAGATTACCA GCCAGAACAGATAGCATGCTATGA

Peptide Sequence

PEP ID	Solyc01g086720.3.1
PEP Infomation	C2 domain-containing family protein (AHRD V3.3 *** B9GFS0_POPTR)
Sequence	MKLIVEVIDAYDLMPKDGEGSVSAFVEVDFENQLSKTRTVPKNLNPTWNHKLIFHLDDIK NHRYKYIDVSVYHERRPIPGRNFLGRVRIPCSNIVKKGEEVYQRFQLEKKWFSSFVKGEI GLKIYISSPSDPNLYPKKSPSPSNIPSIENPEQLDNPPPSLPASEVSTLDTPKDSNSSEV QNTENTAISGADQSSSFAVVEKTGHLTPSEQDTESVEHIEETSQFVFKHQAMQQPVISIR KRPGFQPTMQHGVDHPRAIPSHQGVQLPIHHQVDHPRAIHGQPGVQPPMQYQVAQSRAMH NHPKDDYELKDTNPQLGEQWPRVGGYGGRGWMNSDRHASTYDLVEQMFYLYVRVVKSKDL QPSVLTGSCDPYVEVKMGNYKGRTKHFDKKMNAEWNQVFAFSKDRIQSSVLEVYVKDKDM MGRDDNLGKVVFDLNEVPTRVPPDSPLAPQWYRLEDQRGEGKIRGEIMLAVWMGTQADEA FSDAWHADAAFVHGEGVMSVRSKVYVSPKLWYVRVNVIEAQDIIPNDQSRLPEIFVKAQV GNQVLKTDICPARTANPMWNEDLVFVAAEPFEEQLVLSIEDRVHPMKDEILGKISFPLNT FEKRLDHRPVHSRWFNLEKFGFGSLEVDRRKELKFSSRVHLRVCLEGGYHVLDESTMYIS DQRPTARQLWKPPVGILEVGILGAEGLLPMKMKDSRGSTDAYCVAKYGQKWVRTRTILDT FSPKWNEQYTWEVYDPSTVITLGVFDNCHLGVEKQGTGAARDSRIGKVRIRLSTLESHRI YTHSYPLLVLHPSGVKKMGELQLAVRFTSLSLANMIHTYGHPLLPKMHYLHPFTVNQVDN LRYQAMSIVAVRLARAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGLISVNR WFGDICHWKNPVTSVLVHILFLILIWYPELILPTLFLYMFLIGLWNYRFRPRHPPHMDTK LSWAETAHPDELDEEFDTFPTSRPHDIVRMRYDRLRSVAGRIQTVVGDIATQGERLQGVL SWRDPRATSLFIMFSLFAAVMLYVTPFRVVALVAGLYMLRHPRFRSKMPSVPSNFFKRLP ARTDSML*

Transcript Sequence

Transcript ID	Solyc01g086720.3.1
Transcript Infomation	C2 domain-containing family protein (AHRD V3.3 *** B9GFS0_POPTR)
Sequence	ATGAAGTTAATAGTAGAAGTAATAGATGCTTATGATCTTATGCCAAAAGATGGTGAAGGA TCAGTAAGTGCATTTGTAGAAGTTGATTTTGAAAACCAACTTAGCAAAACTAGAACTGTC CCAAAAAATCTCAACCCCACTTGGAACCATAAACTCATTTTCCATCTTGACGATATAAAG AATCATCGATACAAATACATTGATGTTTCTGTGTATCATGAGAGAAGGCCTATTCCAGGG AGAAACTTTCTTGGAAGGGTGAGAATTCCTTGCTCAAATATAGTCAAGAAAGGGGAAGAA GTTTATCAAAGATTCCAACTTGAAAAGAAATGGTTTTCCTCATTTGTTAAAGGAGAGATT GGCCTCAAAATATATATTTCATCACCATCTGATCCAAATTTATATCCTAAAAAATCTCCT AGTCCTTCAAATATCCCGTCCATCGAAAATCCAGAACAGTTAGATAATCCACCACCTTCA CTTCCTGCTTCTGAAGTTTCTACTCTTGATACTCCTAAAGATAGTAACAGTTCAGAAGTA CAAAACACTGAAAACACTGCAATTTCTGGTGCTGATCAGTCTTCAAGCTTTGCTGTAGTA GAAAAAACTGGTCATCTTACTCCAAGTGAGCAGGACACAGAATCAGTTGAGCACATTGAA GAAACATCTCAATTTGTATTCAAGCATCAAGCTATGCAGCAACCAGTCATATCAATAAGG AAGAGACCAGGTTTCCAACCGACAATGCAGCATGGGGTAGACCACCCCCGAGCTATTCCT AGCCACCAAGGTGTCCAACTGCCAATCCATCATCAAGTAGACCACCCCCGAGCTATTCAT GGCCAGCCAGGTGTCCAACCGCCAATGCAGTATCAAGTAGCCCAATCCCGAGCTATGCAT AACCACCCTAAAGATGACTATGAGCTGAAGGACACGAATCCTCAGCTTGGGGAGCAATGG CCACGTGTTGGAGGTTACGGAGGAAGAGGATGGATGAACAGTGATAGACATGCAAGCACA TACGACCTTGTGGAGCAGATGTTTTATCTTTATGTTCGAGTGGTTAAGTCCAAAGATCTT CAACCAAGTGTACTCACCGGTAGCTGTGACCCATATGTGGAGGTGAAGATGGGGAATTAC AAAGGACGGACAAAGCATTTTGATAAGAAAATGAATGCAGAATGGAACCAGGTATTTGCT TTCTCTAAAGATCGAATTCAGTCTTCAGTTCTTGAAGTTTATGTGAAGGATAAAGATATG ATGGGAAGAGATGATAATCTTGGAAAGGTGGTTTTTGACTTGAATGAGGTCCCAACAAGA GTTCCTCCTGATAGTCCCCTGGCTCCTCAATGGTACAGACTGGAGGATCAACGAGGAGAA GGAAAAATAAGAGGGGAGATCATGCTTGCTGTTTGGATGGGAACACAAGCAGATGAAGCA TTTTCAGATGCCTGGCATGCCGATGCTGCCTTTGTTCATGGAGAGGGGGTAATGAGCGTC AGGTCCAAAGTTTATGTCTCTCCAAAACTTTGGTACGTGAGAGTAAATGTTATTGAAGCT CAAGACATCATCCCAAATGACCAGAGCCGTCTCCCTGAAATTTTTGTGAAAGCTCAGGTG GGAAATCAGGTTCTCAAAACCGATATATGCCCTGCTCGAACAGCAAATCCAATGTGGAAT GAGGATTTGGTTTTTGTAGCTGCTGAGCCTTTTGAGGAGCAGCTAGTCCTCAGCATTGAG GACCGTGTTCACCCAATGAAAGATGAGATTCTTGGAAAGATAAGTTTCCCACTCAACACA TTCGAGAAGAGGCTTGATCACAGGCCGGTCCATTCTCGCTGGTTCAACCTTGAGAAGTTT GGTTTTGGTTCCTTGGAAGTTGACAGGAGGAAAGAGCTCAAGTTTTCAAGCAGAGTTCAC CTCAGAGTATGCCTTGAAGGGGGATATCACGTGCTGGATGAATCAACCATGTACATAAGT GATCAAAGGCCAACAGCACGACAGCTGTGGAAACCACCGGTGGGAATATTGGAAGTTGGC ATATTAGGTGCAGAAGGACTTCTTCCGATGAAGATGAAGGACAGCAGAGGAAGCACAGAT GCCTATTGTGTGGCTAAATATGGTCAGAAATGGGTAAGGACAAGAACCATTCTCGACACT TTCAGCCCCAAATGGAATGAGCAATACACTTGGGAAGTTTATGATCCTTCCACAGTTATC ACATTGGGTGTCTTTGATAACTGTCATTTGGGGGTTGAGAAGCAAGGGACTGGAGCAGCA CGAGACTCACGCATAGGGAAGGTACGTATCAGATTATCAACGTTAGAATCTCATCGAATT TACACTCACTCTTATCCCCTTCTTGTTCTGCACCCATCAGGGGTTAAGAAAATGGGGGAA CTCCAATTGGCAGTAAGATTCACAAGCCTCTCTTTAGCCAACATGATACATACTTATGGC CACCCTTTGCTTCCCAAAATGCACTACCTTCATCCCTTTACTGTCAACCAAGTAGACAAC TTGAGGTACCAAGCTATGAGCATTGTTGCTGTTAGACTGGCTAGAGCTGAACCACCACTC AGGAAAGAAGTTGTAGAGTACATGCTAGATGTGGATTCCCACATGTGGAGTATGAGAAGA AGCAAGGCTAATTTCTTTAGGATCATGTCACTTCTTTCAGGCTTAATCTCTGTTAATCGA TGGTTTGGTGATATATGTCACTGGAAAAATCCAGTCACCTCAGTCTTGGTTCACATCCTC TTCCTGATACTGATCTGGTATCCGGAGTTGATTCTTCCAACTCTGTTTCTCTATATGTTC CTCATTGGACTGTGGAACTATCGATTCCGGCCAAGGCACCCTCCTCACATGGACACTAAG CTTTCATGGGCTGAAACAGCTCACCCTGATGAGCTTGATGAAGAATTCGACACGTTTCCA ACGTCTAGACCCCACGACATTGTTCGAATGAGGTACGATAGGCTGAGAAGTGTTGCTGGG AGGATTCAGACCGTGGTCGGTGACATAGCAACACAAGGAGAGAGGCTGCAGGGGGTGCTA AGCTGGAGAGATCCAAGAGCAACAAGCTTGTTTATCATGTTCAGTCTTTTCGCTGCAGTT ATGCTTTATGTGACTCCCTTCAGAGTGGTGGCTTTAGTTGCTGGGTTATATATGTTGAGG CACCCCAGGTTCAGAAGCAAGATGCCTTCTGTTCCCAGCAACTTCTTCAAGAGATTACCA GCCAGAACAGATAGCATGCTATGA