Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g086650.3.1
CDS Infomation

Siroheme synthase (AHRD V3.3 *** W8SGE9_TOBAC)
Sequence

ATGGCTCTTGTGAGTAGAATTCCTTCAATTTCATCTTCTTCTGGAGCAACCCAATTGACA
AAAATCAAATCTTTTTGTGTTAATCCTGTTTGCTGTATTAACTATGCATCATCATCTTCT
TCTTCCCCTTTTACTGAGAAGCATTCAATTGAGAGATACCAAAGGGATAGTTGGATATAC
AAGAATGAATTGGAGCAACAATCTAGTTCTTGCCCAATTTTACCTGATCCTAGCTACGTG
AGGGACTATGACATAGCTTTGCAGCTGCCTGAACTGAAGAAAATGCTTCAGGTTTTGAGG
GAGAAGAGAGAAGGGGAAGGAGGGTGTGATAGAAAAGGGCCTGGGAATGTGTTCTTGGTG
GGTACTGGACCAGGTGATCCTGAGTTGTTGACTGTTAAGGCTTTGAGAGTTATTCAGAAT
GCTGATCTTTTGTTGTATGATAGATTGGTTTCTAATGAAGTCTTGGATTTGGTTGGTCCT
GATGCTAGGCTTCTCTATGTTGGTAAAACTGCTGGTTATCATAGCAGAACTCAGGAAGAA
ATTCATGAGTTGCTTCTGAGTTTTGCTGAAGCTGGGGCCAATGTTGTGAGACTAAAAGGA
GGTGACCCATTGGTATTTGGACGAGGAGGAGAAGAGATGGATTTTCTCCAACAAAAGGGA
ATTCAAGTTAAAGTTATTCCAGGTATTACTGCAGCATCTGGGATATCGGCGGAGTTGGGA
ATTCCATTAACCCATCGGGGTGTCGCAAATAGTGTTAGATTTCTCACTGGTCACTCGAGA
AAAGGAGGAACAGACCCACTTTTTGTTGCAGAGAATGCGGCTGACCCTGACTCTACATTA
GTTGTTTATATGGGCTTGTCAACGCTTCCTTCCCTGGCCTCAAAGCTCATACATCATGGG
TTGCCAACTGATACACCAGCTGTTGCCATTGAGCGAGGAACAACACCTCAACAACGCATG
GTGTTTGCAGAACTGAAGAATCTTGCTGATGATATTGTATCTCACCAGCTAGAGTCGCCA
ACTTTGATTATCATTGGGAAGGTGGTAGCTCTTTCACCATTATGGCCACACTCCACTGAA
GAGTCTCCTGTCTTGGTTGAGACCAAATCTTCAATCAACACATTGCAATAG

Peptide Sequence

PEP ID

Solyc01g086650.3.1
PEP Infomation

Siroheme synthase (AHRD V3.3 *** W8SGE9_TOBAC)
Sequence

MALVSRIPSISSSSGATQLTKIKSFCVNPVCCINYASSSSSSPFTEKHSIERYQRDSWIY
KNELEQQSSSCPILPDPSYVRDYDIALQLPELKKMLQVLREKREGEGGCDRKGPGNVFLV
GTGPGDPELLTVKALRVIQNADLLLYDRLVSNEVLDLVGPDARLLYVGKTAGYHSRTQEE
IHELLLSFAEAGANVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGISAELG
IPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLASKLIHHG
LPTDTPAVAIERGTTPQQRMVFAELKNLADDIVSHQLESPTLIIIGKVVALSPLWPHSTE
ESPVLVETKSSINTLQ*

Transcript Sequence

Transcript ID

Solyc01g086650.3.1
Transcript Infomation

Siroheme synthase (AHRD V3.3 *** W8SGE9_TOBAC)
Sequence

GGGAGTATCAAATTCGAAATTTGCAAGATAGATCTCATAATTTTAATTTTTAGTTGAATG
CATTTGGTCGACATTGAGGCCTTCTTCATAGTGAGCAAGTACAAGTTTATTTGCCTCGTC
TTACCCACCCCCCTCGCGCCGCCTCCTTCCAAAGGTCAAGATATCCTGGTTGGGGCTTTA
AGGGGCTCAAGTTGGCTCATTTCTTGATTTGTTTTTGATGGTTGTCTCTTTCAAACCATC
AAAAGCTACTGAAAATTGCCTTCTCATGACCCTTTAAAGTTCATAAATTAAAGGTTGTCC
CTTTTTGACACATATATTATTCCCTCTGAAATCTACTCTACATTTTAGAGAAAAAAAGTT
TACACCTTTAACTCTCACTGGGGTGTGTGTCCCTCATCTTCTTGAAAAGAAAAGGGTATG
GCTCTTGTGAGTAGAATTCCTTCAATTTCATCTTCTTCTGGAGCAACCCAATTGACAAAA
ATCAAATCTTTTTGTGTTAATCCTGTTTGCTGTATTAACTATGCATCATCATCTTCTTCT
TCCCCTTTTACTGAGAAGCATTCAATTGAGAGATACCAAAGGGATAGTTGGATATACAAG
AATGAATTGGAGCAACAATCTAGTTCTTGCCCAATTTTACCTGATCCTAGCTACGTGAGG
GACTATGACATAGCTTTGCAGCTGCCTGAACTGAAGAAAATGCTTCAGGTTTTGAGGGAG
AAGAGAGAAGGGGAAGGAGGGTGTGATAGAAAAGGGCCTGGGAATGTGTTCTTGGTGGGT
ACTGGACCAGGTGATCCTGAGTTGTTGACTGTTAAGGCTTTGAGAGTTATTCAGAATGCT
GATCTTTTGTTGTATGATAGATTGGTTTCTAATGAAGTCTTGGATTTGGTTGGTCCTGAT
GCTAGGCTTCTCTATGTTGGTAAAACTGCTGGTTATCATAGCAGAACTCAGGAAGAAATT
CATGAGTTGCTTCTGAGTTTTGCTGAAGCTGGGGCCAATGTTGTGAGACTAAAAGGAGGT
GACCCATTGGTATTTGGACGAGGAGGAGAAGAGATGGATTTTCTCCAACAAAAGGGAATT
CAAGTTAAAGTTATTCCAGGTATTACTGCAGCATCTGGGATATCGGCGGAGTTGGGAATT
CCATTAACCCATCGGGGTGTCGCAAATAGTGTTAGATTTCTCACTGGTCACTCGAGAAAA
GGAGGAACAGACCCACTTTTTGTTGCAGAGAATGCGGCTGACCCTGACTCTACATTAGTT
GTTTATATGGGCTTGTCAACGCTTCCTTCCCTGGCCTCAAAGCTCATACATCATGGGTTG
CCAACTGATACACCAGCTGTTGCCATTGAGCGAGGAACAACACCTCAACAACGCATGGTG
TTTGCAGAACTGAAGAATCTTGCTGATGATATTGTATCTCACCAGCTAGAGTCGCCAACT
TTGATTATCATTGGGAAGGTGGTAGCTCTTTCACCATTATGGCCACACTCCACTGAAGAG
TCTCCTGTCTTGGTTGAGACCAAATCTTCAATCAACACATTGCAATAGGCCAGCCTCACT
GAATGGGATGATCATTTGTGATGCCAAAACCTCATCTCTTTCCTGCAGCCAAGCTGAATA
CTGCTGCATGCTAAATGATGTGCAACTATATCAATTCTCTTTCAGATTGTGCAGTGAAGT
CTAGTACAATAAAGGTGATTTTACTTCGTGATGCTAATGGCGATGCGTAGAGGAGAATCT
TCAGCCAGCATGGACTCAACGGGGCGTATCTTTACTCTCATTCCAGTAACTTGACAACTC
TGGCTCTATTTTCAAGAGCCAACAAGTGAACTAAGATTTTGACAGTGTCCGATTCTTTAA
GCAAATACTAATCCGTAAGCATTTATCAAGAGGCGCGATATGTTTTATCGAATAATTGAT
AATTTTGTAAAATGAGTTGGAAGGATATTATGTTGATGGTCTTCTTGGTGGTGTATTTTT
TTATATATAATTTGCCTATTTCTATTTTAGTTTGGTGCCATCATTGCCATTGATTGTTGA
GCAAAGACTGCCTTTGTTATGAGGTGTTTCAGTTGATTTCTTTATACAGGGAAAAAATGT
GTTTTTATGTTAAAGCCAAGTCCAAGCTCCC