Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g086640.2.1
CDS Infomation

LOW QUALITY:O-fucosyltransferase family protein (AHRD V3.3 *** AT2G44500.1)
Sequence

ATGGCAGTGTCAAAAACTAACAAGAAGAAGCAGCAGTGTTACATAGCAGTACCATCTCAA
ATAATAAATTCAATTTCTTCTTCAGGGCTTCAGTCTCTGTTACTGTCTCCAAAGAAAAAG
AACCCATCTTTTTCTGTAAAGCTCAAACTTTTGCTTAATAATCCAAGATTCTGGGTTTTG
TTTCTTTTTGTTTTTGGGTTTGTTGGTATGTTGAAGTTATGGTTCAATTTTGAAACTTTA
CTTCCTTTTGCACCAAACCCATGTGGGATTTTTCAAGAAAAGACTTCATTTTTAAATGAC
CATCAAGTTTCTCAGCTCAGTATTGGAGCTCTGAATCTTGGAAATGGAGAAAAAGAAGAA
GAAGGGGATGAAAAGAATGAGTTTTGGAAACAACCTGATGGGTTGGGTTATAAGCCTTGT
TTGGATTTTAGTTCAGAGTATAGAAAAACAAGTTCGGATATTGTTAAAGGAAGGACTAGG
TATTTGATGGTTGTGGTTTCTGGTGGAATGAATCAGCAGAGAAATCAGATTGTTGATGCT
GTGGTGATTGCTAGGATTCTTGGTGCTGCTCTTGTTGTTCCCATTTTGCAAGTTAATGTC
ATCTGGGGTGATGAAAGTGAGTTCTCCGATATATTTGACTTGGATCACTTTAAGGAAGTA
TTAGCAAATGATGTAAGAATAGTTTCATCACTTCCGTCAACGCACGTAATGACTAGACCT
GTGGAGGAGAAAAGGACTCCTCTCCATGCCTCCCCCGAATGGATTCGTTCACATTATACC
AGAAAGCTTAGGAGGGATGGTGTTCTACTTTTGCGAAGCCTTGACTCAAGGCTTTCTAAG
GATCTTCCTTCTGATCTTCAAAAACTTCGTTGCAAGGTGGCGTTTCATGCTTTAAGGTTT
TCGCCATCAATCTTAGAACTTGGTAACAAACTTACTGAGAGAATGAGGAGCAAGGGACCA
TATGTTGCTCTTCATTTGAGAATGGAGAAGGATGTGTGGGTGAGAACAGGATGTCTTCCT
GGTTTAAGCCATGAGATTGATGAGATGATAAATAATGAGAGGAAGCAAAGGCCTGAGCTC
TTAACTTCGCGTTCAAACATGACCTACCATGACAGAAAGCTTGCTGGTCTCTGCCCTTTG
AATGCTTTGGAGGTTACAAGGTTGCTCAAAGCATTGGGAGCACCAAAGAGAGCAAGAATC
TATTGGGCTGGAGGAATTCCTTTGGGTGGAAAAGAAGCATTGCAACCATTGACAAGTGAA
TTCCCTCACTTTTTTAACAAAGAGGATCTTGCGTTGCCCGGGGAACTTGAGCCATTTTCC
AAGAAAGCATCCCTTATGGCTGCTCTCGACTACATAGTAACCGAAAATAGCAATGTTTTC
ATGCCATCTCATGGTGGAAACATGGGACATGCTCTCCAGGGACAAAGGGCCTATGCAGGG
CACAAAAAGACTATCACTCCCAACAAAAGACAGATGCTTCGACATTTTCTGAACTCATCA
CTTTCTGAAACAGAATTCAACAGAATAATACTGGACTTGCATAGAGATTCCTTAGGTCAG
CCAGAATTGAGGAAACCAGGAAGGGATGTAACAAAGTACCCTGTCCCAGAGTGCATGTGC
AATGGTACTATGAACCATTCATCGACATAA

Peptide Sequence

PEP ID

Solyc01g086640.2.1
PEP Infomation

LOW QUALITY:O-fucosyltransferase family protein (AHRD V3.3 *** AT2G44500.1)
Sequence

MAVSKTNKKKQQCYIAVPSQIINSISSSGLQSLLLSPKKKNPSFSVKLKLLLNNPRFWVL
FLFVFGFVGMLKLWFNFETLLPFAPNPCGIFQEKTSFLNDHQVSQLSIGALNLGNGEKEE
EGDEKNEFWKQPDGLGYKPCLDFSSEYRKTSSDIVKGRTRYLMVVVSGGMNQQRNQIVDA
VVIARILGAALVVPILQVNVIWGDESEFSDIFDLDHFKEVLANDVRIVSSLPSTHVMTRP
VEEKRTPLHASPEWIRSHYTRKLRRDGVLLLRSLDSRLSKDLPSDLQKLRCKVAFHALRF
SPSILELGNKLTERMRSKGPYVALHLRMEKDVWVRTGCLPGLSHEIDEMINNERKQRPEL
LTSRSNMTYHDRKLAGLCPLNALEVTRLLKALGAPKRARIYWAGGIPLGGKEALQPLTSE
FPHFFNKEDLALPGELEPFSKKASLMAALDYIVTENSNVFMPSHGGNMGHALQGQRAYAG
HKKTITPNKRQMLRHFLNSSLSETEFNRIILDLHRDSLGQPELRKPGRDVTKYPVPECMC
NGTMNHSST*

Transcript Sequence

Transcript ID

Solyc01g086640.2.1
Transcript Infomation

LOW QUALITY:O-fucosyltransferase family protein (AHRD V3.3 *** AT2G44500.1)
Sequence

TAAGAACAAAAAAGAACCCATTAGCCATCTGACACACCTTCTCTGACTTGTACCATTTTT
CATCCAATACTAAACGCGCATTGATCATTGTATTTCGTGTTTCTGCCGATCATTTCCACC
ATTTCTTTTTCAGAAACTTTCTTAGAAAGTCTCTGAGAAAATCATGTTTTAAATAAACAA
AAAAAACAGAGCATTTTTTTCTCACTATTTTTGTGTTTCTTGAGGTGAAGAAGCCATTTG
TTTGTGAAGAAATGGCAGTGTCAAAAACTAACAAGAAGAAGCAGCAGTGTTACATAGCAG
TACCATCTCAAATAATAAATTCAATTTCTTCTTCAGGGCTTCAGTCTCTGTTACTGTCTC
CAAAGAAAAAGAACCCATCTTTTTCTGTAAAGCTCAAACTTTTGCTTAATAATCCAAGAT
TCTGGGTTTTGTTTCTTTTTGTTTTTGGGTTTGTTGGTATGTTGAAGTTATGGTTCAATT
TTGAAACTTTACTTCCTTTTGCACCAAACCCATGTGGGATTTTTCAAGAAAAGACTTCAT
TTTTAAATGACCATCAAGTTTCTCAGCTCAGTATTGGAGCTCTGAATCTTGGAAATGGAG
AAAAAGAAGAAGAAGGGGATGAAAAGAATGAGTTTTGGAAACAACCTGATGGGTTGGGTT
ATAAGCCTTGTTTGGATTTTAGTTCAGAGTATAGAAAAACAAGTTCGGATATTGTTAAAG
GAAGGACTAGGTATTTGATGGTTGTGGTTTCTGGTGGAATGAATCAGCAGAGAAATCAGA
TTGTTGATGCTGTGGTGATTGCTAGGATTCTTGGTGCTGCTCTTGTTGTTCCCATTTTGC
AAGTTAATGTCATCTGGGGTGATGAAAGTGAGTTCTCCGATATATTTGACTTGGATCACT
TTAAGGAAGTATTAGCAAATGATGTAAGAATAGTTTCATCACTTCCGTCAACGCACGTAA
TGACTAGACCTGTGGAGGAGAAAAGGACTCCTCTCCATGCCTCCCCCGAATGGATTCGTT
CACATTATACCAGAAAGCTTAGGAGGGATGGTGTTCTACTTTTGCGAAGCCTTGACTCAA
GGCTTTCTAAGGATCTTCCTTCTGATCTTCAAAAACTTCGTTGCAAGGTGGCGTTTCATG
CTTTAAGGTTTTCGCCATCAATCTTAGAACTTGGTAACAAACTTACTGAGAGAATGAGGA
GCAAGGGACCATATGTTGCTCTTCATTTGAGAATGGAGAAGGATGTGTGGGTGAGAACAG
GATGTCTTCCTGGTTTAAGCCATGAGATTGATGAGATGATAAATAATGAGAGGAAGCAAA
GGCCTGAGCTCTTAACTTCGCGTTCAAACATGACCTACCATGACAGAAAGCTTGCTGGTC
TCTGCCCTTTGAATGCTTTGGAGGTTACAAGGTTGCTCAAAGCATTGGGAGCACCAAAGA
GAGCAAGAATCTATTGGGCTGGAGGAATTCCTTTGGGTGGAAAAGAAGCATTGCAACCAT
TGACAAGTGAATTCCCTCACTTTTTTAACAAAGAGGATCTTGCGTTGCCCGGGGAACTTG
AGCCATTTTCCAAGAAAGCATCCCTTATGGCTGCTCTCGACTACATAGTAACCGAAAATA
GCAATGTTTTCATGCCATCTCATGGTGGAAACATGGGACATGCTCTCCAGGGACAAAGGG
CCTATGCAGGGCACAAAAAGACTATCACTCCCAACAAAAGACAGATGCTTCGACATTTTC
TGAACTCATCACTTTCTGAAACAGAATTCAACAGAATAATACTGGACTTGCATAGAGATT
CCTTAGGTCAGCCAGAATTGAGGAAACCAGGAAGGGATGTAACAAAGTACCCTGTCCCAG
AGTGCATGTGCAATGGTACTATGAACCATTCATCGACATAACTCCATATCGGTGAAATAA
CATGTGATGAAGCACCCCTGCAGCTAATCATACATTCTTACAACATCCTGAGAACTTTGG
ATTAAGCCTCACTGTGATTCAGACGAGCAGACGGGGTTGGTAGAGGTGCAATACAATTTT
TTTCGACTATGTTTAGAGGTGAATCCTTGGTGGTTATAACTTGTGGTAACATGAGACTGA
TGCAACAGAACTGGGAAAATGAATCTCTAATACAAAAGCAACATCTTATACAAGTCCAAT
CC