Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g081640.3.1
CDS Infomation	DUF936 family protein (AHRD V3.3 *** A2Q3C0_MEDTR)
Sequence	ATGCTGGTGTATCACTTTAATAATAATGGGGTTTTTCAGGTGATTAGTATTGTTCCTTCA CTTGATGATGATCCATGGAAAAGCAGGGGATTTTATTTAAGGGTATCAGATTCTCAACAT TCAGCTTACGTTTCTGTATCAGAACAAGATATTGAGTTGATACTGAGTGACAAGATCCAA CTGGGTCAGTTCATTCATGTTACTCGTCTTGATTCCGGTTCCCCTGTTCCGGTTCTTCGT GGACTCAAGCCGGTTCCCAACAGACGCCCATGTGTTGGGGATCCTAAAGATTTGATTTCT AGTGATTTTCTCACTGCTCGGAACCGACCCGACCCGAAAAGAGGGAAGAAGAATGGTGAA GTGAAAAGGGTCGAGGTGAAAACCAAAATAAACAGAGTGGTGCTGAGTGAGGATGTAAAA TCAAGAAGACAGTCCATTGGGAATGGGAAGGTTGATGGGTTAGAGATGAGGAGATTGAGT TTCGATTCAGTTAGAAGAGGATGGGATCGGAGCCCCGGTGAGAAAAATGGTGCTGGAGCT ACACCTAGGTCCAAATCGAAAACCGGGTTTCCGGGTTCGGACTCTCTTCCTTCTGTGAAG AAGCCTTCTTTAGATAAAGTTTCAACTCCAAGACATTCAACTGCAAGTATTTCACCGCTT ACAAGTAGGAATAATATTGTGTCACCAAGGTCAGTTAGCAAGCCCACTAGAAAAGATGTA GAGCTTATTGTGTCGCCAAGATCAGTTAGCAAGCCTACTAGAAAAAATCTAGAGCTTATT GTCTCACCAAGAGCAGTTAGCAAGTCCGCTAGAAAAGATCTAGAGCTTTCCCAAGATAAG ACTCTTCCGTGCAATCTGACAAAGGTGGCCCTCAGTTTTAAAAATTGGTCCGACTCAAGG ATTTCATGGAGTTCACTTCCATCAACAGTTCGTGATCTTGGCAAGGAAGTTACAAGTTCA AGAAATGTTGCATTTCTGTCTGCTATGCATGCATTAGAAGAAGCTGCTGCCGCAGAAGGT GTCATCCAGTGCATGAGTATGTTTGCAGAACTATGTGAATCATCGAAGAAAGTACCTGCT GGACAATTGATTGAGCAATTTTTAAACCTTCATCAAAACATGCAGAAAGCAGCGTCTCTT ACCAAATCATTGGTGATGAGAACTCCTGAAGCGAAAGGCAATGACAAGTTGTGTCTGCAG GATCCCTTTCCTGAAATTTGCCATAACTTTACCAATAAGAACGCAGCCTCTTGGATTCAA GCTGCAATTGATTCAGAACTTTCCAAATTCTGTTTGTTCACAAAGGAAGACAAGAATGGA AATTTGGATAACGAGAAATCTCATCACATTATACTAGAGAGCACTCCGAAGATTAGTGAA GCAGAAAACCATTCGCCTGTAAACAAGCAAAGCACTAAAGCCAATGGGCTGTCTGGTCCT AATTCTAGTAGAAGAAGTTCAGTATCTAAACCGAAGCAGCATTTACCAGCCACTACCAGA AGAACAAATATCGAAAGGGAAGAGTGGTCCGAAGGGAGTGGGGTGAAGGAGGCTGCAAAT TTAGCAGAAAAGTTGCTTTCTTCATCTCGAGCTTGGTTCTTGAACTTCTTAGAAGATGCA TTGAGCAAGGGATTTGGGCTTGATACTGTAGACGGAAATTCTGAAATTGTAGATCTTCTT GGTCAGCTCAAAAGTGTCAATCAGTGGTTGGATGACATGCTTAAGTTAGGTAACAGAATA GATGAGAGGGTAGAAGGATTAAAACAGAAGTTATATAGGTTCTTGCTCGATCATGTTGAC TCCTCGATTCTTGGAGGCAAGTAA

Peptide Sequence

PEP ID	Solyc01g081640.3.1
PEP Infomation	DUF936 family protein (AHRD V3.3 *** A2Q3C0_MEDTR)
Sequence	MLVYHFNNNGVFQVISIVPSLDDDPWKSRGFYLRVSDSQHSAYVSVSEQDIELILSDKIQ LGQFIHVTRLDSGSPVPVLRGLKPVPNRRPCVGDPKDLISSDFLTARNRPDPKRGKKNGE VKRVEVKTKINRVVLSEDVKSRRQSIGNGKVDGLEMRRLSFDSVRRGWDRSPGEKNGAGA TPRSKSKTGFPGSDSLPSVKKPSLDKVSTPRHSTASISPLTSRNNIVSPRSVSKPTRKDV ELIVSPRSVSKPTRKNLELIVSPRAVSKSARKDLELSQDKTLPCNLTKVALSFKNWSDSR ISWSSLPSTVRDLGKEVTSSRNVAFLSAMHALEEAAAAEGVIQCMSMFAELCESSKKVPA GQLIEQFLNLHQNMQKAASLTKSLVMRTPEAKGNDKLCLQDPFPEICHNFTNKNAASWIQ AAIDSELSKFCLFTKEDKNGNLDNEKSHHIILESTPKISEAENHSPVNKQSTKANGLSGP NSSRRSSVSKPKQHLPATTRRTNIEREEWSEGSGVKEAANLAEKLLSSSRAWFLNFLEDA LSKGFGLDTVDGNSEIVDLLGQLKSVNQWLDDMLKLGNRIDERVEGLKQKLYRFLLDHVD SSILGGK*

Transcript Sequence

Transcript ID	Solyc01g081640.3.1
Transcript Infomation	DUF936 family protein (AHRD V3.3 *** A2Q3C0_MEDTR)
Sequence	AAAAATACTCAAAATTAATTGAAGGTCAAATTTTGAAATTTAATCATATTTTATTTAATT AACAATGATAATAAAATTTTAAATAGCATACAAATAAAATTGAAAGGAGAAAATATTTTG CATCTTTTTATGATAGAAAAGGCTGATTTTTGTAATATCTCCAGGTAGGAGCATTACACT ACCTTTTTAGTTGAATCTTGTCTTCTACTGCCTTCTTCCTTACGGACGTACTCTCTGCCC ATTCCTCTCTCTCTCTCTCTTCTGTACCATTTCTGCAACTCTGTCACCCATAGACCACAT CCCCAGCTGACACGTGTCCTTTTTCCGTTTTGAGATTCGCCTCAAACTCACTCTTCCCCA TACCCCCCAAATACCTTCTCCCAAATCTTGCTTGGCCATGTTTGTTAATCTTTCTTTTTT GCTCTCTGTTTCATCTACATTGCACTAATGGCGTCTCTAACGCCTGGTATTTTGCTTAAA CTCTTGCAACATCTAGATGATAAAGAAACCAAAGTTGCTGGACAACACCGCTCTGCTCTT CTTCAGGCATGTACAGAAAAATACTAATCTTCTTCTTCTTTTTATATAACAATGCTGGTG TATCACTTTAATAATAATGGGGTTTTTCAGGTGATTAGTATTGTTCCTTCACTTGATGAT GATCCATGGAAAAGCAGGGGATTTTATTTAAGGGTATCAGATTCTCAACATTCAGCTTAC GTTTCTGTATCAGAACAAGATATTGAGTTGATACTGAGTGACAAGATCCAACTGGGTCAG TTCATTCATGTTACTCGTCTTGATTCCGGTTCCCCTGTTCCGGTTCTTCGTGGACTCAAG CCGGTTCCCAACAGACGCCCATGTGTTGGGGATCCTAAAGATTTGATTTCTAGTGATTTT CTCACTGCTCGGAACCGACCCGACCCGAAAAGAGGGAAGAAGAATGGTGAAGTGAAAAGG GTCGAGGTGAAAACCAAAATAAACAGAGTGGTGCTGAGTGAGGATGTAAAATCAAGAAGA CAGTCCATTGGGAATGGGAAGGTTGATGGGTTAGAGATGAGGAGATTGAGTTTCGATTCA GTTAGAAGAGGATGGGATCGGAGCCCCGGTGAGAAAAATGGTGCTGGAGCTACACCTAGG TCCAAATCGAAAACCGGGTTTCCGGGTTCGGACTCTCTTCCTTCTGTGAAGAAGCCTTCT TTAGATAAAGTTTCAACTCCAAGACATTCAACTGCAAGTATTTCACCGCTTACAAGTAGG AATAATATTGTGTCACCAAGGTCAGTTAGCAAGCCCACTAGAAAAGATGTAGAGCTTATT GTGTCGCCAAGATCAGTTAGCAAGCCTACTAGAAAAAATCTAGAGCTTATTGTCTCACCA AGAGCAGTTAGCAAGTCCGCTAGAAAAGATCTAGAGCTTTCCCAAGATAAGACTCTTCCG TGCAATCTGACAAAGGTGGCCCTCAGTTTTAAAAATTGGTCCGACTCAAGGATTTCATGG AGTTCACTTCCATCAACAGTTCGTGATCTTGGCAAGGAAGTTACAAGTTCAAGAAATGTT GCATTTCTGTCTGCTATGCATGCATTAGAAGAAGCTGCTGCCGCAGAAGGTGTCATCCAG TGCATGAGTATGTTTGCAGAACTATGTGAATCATCGAAGAAAGTACCTGCTGGACAATTG ATTGAGCAATTTTTAAACCTTCATCAAAACATGCAGAAAGCAGCGTCTCTTACCAAATCA TTGGTGATGAGAACTCCTGAAGCGAAAGGCAATGACAAGTTGTGTCTGCAGGATCCCTTT CCTGAAATTTGCCATAACTTTACCAATAAGAACGCAGCCTCTTGGATTCAAGCTGCAATT GATTCAGAACTTTCCAAATTCTGTTTGTTCACAAAGGAAGACAAGAATGGAAATTTGGAT AACGAGAAATCTCATCACATTATACTAGAGAGCACTCCGAAGATTAGTGAAGCAGAAAAC CATTCGCCTGTAAACAAGCAAAGCACTAAAGCCAATGGGCTGTCTGGTCCTAATTCTAGT AGAAGAAGTTCAGTATCTAAACCGAAGCAGCATTTACCAGCCACTACCAGAAGAACAAAT ATCGAAAGGGAAGAGTGGTCCGAAGGGAGTGGGGTGAAGGAGGCTGCAAATTTAGCAGAA AAGTTGCTTTCTTCATCTCGAGCTTGGTTCTTGAACTTCTTAGAAGATGCATTGAGCAAG GGATTTGGGCTTGATACTGTAGACGGAAATTCTGAAATTGTAGATCTTCTTGGTCAGCTC AAAAGTGTCAATCAGTGGTTGGATGACATGCTTAAGTTAGGTAACAGAATAGATGAGAGG GTAGAAGGATTAAAACAGAAGTTATATAGGTTCTTGCTCGATCATGTTGACTCCTCGATT CTTGGAGGCAAGTAACCAGCTATGATCTTAGCAATTGACTACTAACATCCTGGAAATTCG ATTGTTCGTTACAGATGCTATTAGATTAGGTATGTTCCAATGACCTGAATATGGTCATTA ACAGTTGATTAGGCTCTAAGATATTTAGAGAGGAGTAGATATGACATACTGCTTCAGTAT CCAAATGTAAAGAAGAATATATCTTCACTAAGCTGGAGAAAGAAAACTTAAATTAGGTAT TTCCATCATCAAATTTTTTTTTCTTTCTTATCATTTTTGCT