Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g081520.3.1
CDS Infomation

30S ribosomal S2 (AHRD V3.3 *** A0A0B0MLM4_GOSAR)
Sequence

ATGACAATCCATTCAGTAGTAATCCAAAAGCTCCTAAGCACCAACGCTCACTTGGGTCGC
CGTGTGGCGGAACACCACTTCAAAATCTACTCAGTAGGCTCCCGGAATGGAATGACAATC
ATAGATTCTGAAAAGCAATTGATCTGCCTCCGAAACGCCTGTTCTTTCATTGGGGAACTC
GTTCGACAAAGAGCACGCTTCATTTTCGTCAATACCAACACCCTTTTCGATGAAATTATT
GATCAGATGACGCAAACGATTGGGTGTAGGAATGATACTTCTTGGCGTCTTGGAGGCTTT
TTGACAAACAGTTCGAGTCCGAGAAAGTTTCGAGGAAGGAATAAGAAGTTGAACCTTACG
GCTATACAGCCACCTGATTGTGTGGTTATCTTTGATACGGATAGGAAGTCTTCTGTGATT
CAAGAGGCTGCTAAGTTGCAAATTCCGATTGTGGGTCTTGTTGATTCGAGTATGCCGTTG
GATATTTACAAGAAAATTACTTATCCTGTGCCTGCCAAGGATTCCGTGCAATTTGTGTAT
TTGTTTTGTAATTTGATTACAAAGACTTTCCTTAACGAGCAGAGAAGGTTGAATGCTGCC
ATGGGAGCTTCTGCAATTGCAAAGCCTGAAATTAGAGAGGAAGTTGAACAACTTGACAAG
ATCAAGACAGTTGGCAAGGATAAAATTTATGTTCTGCCTTATGAAAGATTAGAACCTGCT
TCTGAGGATGCTACCGAGACTAAGCAGCTACTGGACAAACTTGTCGTGTTAAAGTTAAAT
GGTAATTTGGGATCAGATATGGGTTTCAGTGGACCAAAATCTGCACTTGAAGTATGTAAC
GGGTTAACTTGTCTAGATTTGGTCGTCAATCATATTGAGTCCATTAACTCAAAATATGGT
TGCAATATTCCATTGCTGATGATGAATACTCCTAGTACACATGATGGCATCATGAAGGTT
TTGGAGAAGCACCCAAATAAAAATATCCACACTTTCACTCAGAGCCAACGTCAACAAGAA
AATGTTGAAGATATGTTAGAGTCGCGGACCCTCAATAAATCAAGCGCACAGGAAAAGTTA
TATCCATCCAACCTGCTGGATGTTTTCCTTTCTTTGAACAGCAGTGGGAAGCTTGAACCA
CTAATTTCACAGGGTAAGGAGTATTTCCTACTGCTGCAGTCAGAAAACCTTGCTGAAGTT
GTTGACCCAAAAATTCTGAATCATTTGATTAAAAACAGCATAGAACATTGCGTCGAGGTA
ATGCCTACCACCTCAGGAACGGAAGAGACAAGTCTTCCGCCTCAGGAAGGAAGGATTCAG
TCAAAGTCGCATGTCAAATCAATCAATACAATGTGGATGAGTATGAGCTGCATTGAGAGG
CTACTACAAAGAAGTGATCTAGGTTTTACCAGTTCTAAGTTTTTCGATCGAGCATTTGCT
ATTGATACTCCATGGTCAAGATACCTTCCAGTTGAGAGAACATCAGATTTGCTCATTTTG
CAGTCAGATCTCTACACCTCAGTTGAAGGCACTCTTGTGAGAAATGCAGCAAGAGCAAAT
CCCAAGGATCCTTCTATTGAGCTAGGACCTGAGTTTGGAAATGTTGATGATTTCCGTAGT
CGTTTCAAGTCAATTCCAAACATTATAGAACTTGACAGCTTGAAGGTGACAGGGGATGTG
TGGTTTGGAACTGGCACAACTCTAAAGGGGAAAGTCAGTATTGCTGCAAGACCAGGCATG
AAAATAGTTATTCCTGATGGAATGGAGCTTAAAAATAGGATCATCACCAGCCAGTCAGAC
ATTGGAGGACCGAGTTCCTTGTAG

Peptide Sequence

PEP ID

Solyc01g081520.3.1
PEP Infomation

30S ribosomal S2 (AHRD V3.3 *** A0A0B0MLM4_GOSAR)
Sequence

MTIHSVVIQKLLSTNAHLGRRVAEHHFKIYSVGSRNGMTIIDSEKQLICLRNACSFIGEL
VRQRARFIFVNTNTLFDEIIDQMTQTIGCRNDTSWRLGGFLTNSSSPRKFRGRNKKLNLT
AIQPPDCVVIFDTDRKSSVIQEAAKLQIPIVGLVDSSMPLDIYKKITYPVPAKDSVQFVY
LFCNLITKTFLNEQRRLNAAMGASAIAKPEIREEVEQLDKIKTVGKDKIYVLPYERLEPA
SEDATETKQLLDKLVVLKLNGNLGSDMGFSGPKSALEVCNGLTCLDLVVNHIESINSKYG
CNIPLLMMNTPSTHDGIMKVLEKHPNKNIHTFTQSQRQQENVEDMLESRTLNKSSAQEKL
YPSNLLDVFLSLNSSGKLEPLISQGKEYFLLLQSENLAEVVDPKILNHLIKNSIEHCVEV
MPTTSGTEETSLPPQEGRIQSKSHVKSINTMWMSMSCIERLLQRSDLGFTSSKFFDRAFA
IDTPWSRYLPVERTSDLLILQSDLYTSVEGTLVRNAARANPKDPSIELGPEFGNVDDFRS
RFKSIPNIIELDSLKVTGDVWFGTGTTLKGKVSIAARPGMKIVIPDGMELKNRIITSQSD
IGGPSSL*

Transcript Sequence

Transcript ID

Solyc01g081520.3.1
Transcript Infomation

30S ribosomal S2 (AHRD V3.3 *** A0A0B0MLM4_GOSAR)
Sequence

AACGCGGACATTAATTATAAATTTCTCAATTTTTTCCTCCAAATTTTATATGCACTTCGT
ATATATGGGACAAGTGAACTGAGAGAGCACAATTGGACGACTTTAGCGGCCGGAGGCCTC
AGCCCTTGGTGCTCAAACTCAAAACCCTTAAACCCTCAACCTCCGTTGTCGATCTATACA
ACAAGCTACATCCCATTTTCATATTTTCTCACACAATGACAATCCATTCAGTAGTAATCC
AAAAGCTCCTAAGCACCAACGCTCACTTGGGTCGCCGTGTGGCGGAACACCACTTCAAAA
TCTACTCAGTAGGCTCCCGGAATGGAATGACAATCATAGATTCTGAAAAGCAATTGATCT
GCCTCCGAAACGCCTGTTCTTTCATTGGGGAACTCGTTCGACAAAGAGCACGCTTCATTT
TCGTCAATACCAACACCCTTTTCGATGAAATTATTGATCAGATGACGCAAACGATTGGGT
GTAGGAATGATACTTCTTGGCGTCTTGGAGGCTTTTTGACAAACAGTTCGAGTCCGAGAA
AGTTTCGAGGAAGGAATAAGAAGTTGAACCTTACGGCTATACAGCCACCTGATTGTGTGG
TTATCTTTGATACGGATAGGAAGTCTTCTGTGATTCAAGAGGCTGCTAAGTTGCAAATTC
CGATTGTGGGTCTTGTTGATTCGAGTATGCCGTTGGATATTTACAAGAAAATTACTTATC
CTGTGCCTGCCAAGGATTCCGTGCAATTTGTGTATTTGTTTTGTAATTTGATTACAAAGA
CTTTCCTTAACGAGCAGAGAAGGTTGAATGCTGCCATGGGAGCTTCTGCAATTGCAAAGC
CTGAAATTAGAGAGGAAGTTGAACAACTTGACAAGATCAAGACAGTTGGCAAGGATAAAA
TTTATGTTCTGCCTTATGAAAGATTAGAACCTGCTTCTGAGGATGCTACCGAGACTAAGC
AGCTACTGGACAAACTTGTCGTGTTAAAGTTAAATGGTAATTTGGGATCAGATATGGGTT
TCAGTGGACCAAAATCTGCACTTGAAGTATGTAACGGGTTAACTTGTCTAGATTTGGTCG
TCAATCATATTGAGTCCATTAACTCAAAATATGGTTGCAATATTCCATTGCTGATGATGA
ATACTCCTAGTACACATGATGGCATCATGAAGGTTTTGGAGAAGCACCCAAATAAAAATA
TCCACACTTTCACTCAGAGCCAACGTCAACAAGAAAATGTTGAAGATATGTTAGAGTCGC
GGACCCTCAATAAATCAAGCGCACAGGAAAAGTTATATCCATCCAACCTGCTGGATGTTT
TCCTTTCTTTGAACAGCAGTGGGAAGCTTGAACCACTAATTTCACAGGGTAAGGAGTATT
TCCTACTGCTGCAGTCAGAAAACCTTGCTGAAGTTGTTGACCCAAAAATTCTGAATCATT
TGATTAAAAACAGCATAGAACATTGCGTCGAGGTAATGCCTACCACCTCAGGAACGGAAG
AGACAAGTCTTCCGCCTCAGGAAGGAAGGATTCAGTCAAAGTCGCATGTCAAATCAATCA
ATACAATGTGGATGAGTATGAGCTGCATTGAGAGGCTACTACAAAGAAGTGATCTAGGTT
TTACCAGTTCTAAGTTTTTCGATCGAGCATTTGCTATTGATACTCCATGGTCAAGATACC
TTCCAGTTGAGAGAACATCAGATTTGCTCATTTTGCAGTCAGATCTCTACACCTCAGTTG
AAGGCACTCTTGTGAGAAATGCAGCAAGAGCAAATCCCAAGGATCCTTCTATTGAGCTAG
GACCTGAGTTTGGAAATGTTGATGATTTCCGTAGTCGTTTCAAGTCAATTCCAAACATTA
TAGAACTTGACAGCTTGAAGGTGACAGGGGATGTGTGGTTTGGAACTGGCACAACTCTAA
AGGGGAAAGTCAGTATTGCTGCAAGACCAGGCATGAAAATAGTTATTCCTGATGGAATGG
AGCTTAAAAATAGGATCATCACCAGCCAGTCAGACATTGGAGGACCGAGTTCCTTGTAGA
TGGGATTCTGCAATATGAATGTATATCTTAACTCGAAGAGGTATTTATCATCATACCAGG
TGATTACAAGCCTGAAGACTGAGTCCCAATCAAAATCTGCATTTGGATGTTTATGAAAAA
TGATAGGCATCAGAATTTTGTTGTAATAAAGGTTGTTTTTTCTCTACTGTTCCTAGATTC
AGTTTTTTTTCAGAAGGAAAGTAGAGACAAGTGAAGAGGAAGAGAAATCATCATAAATGT
GTCATCGTTCATTATTGACAATCAAGTTACCATTTTCCGCAGTCTAAAAAATAGAATTAT
TCAAAGCTCATGTAAAGGTGAGAATCGTTTCTTTATTCTTAGATGTTTGACTACAAAATA
GGCAGACAATTTATCTATTTACTTCATATTCATCTCTGTAATCAGTTATGGCACAATATT
TTCAAAATTCTGTTTTTCAAATTTTGATAAATACAAATTACGCATGATGATCCTAACCA