Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g081060.3.1
CDS Infomation

xyloglucan endotransglucosylase-hydrolase XTH5
Sequence

ATGAAAATATGTCTTTCTGTCTTATTTTTTTTCCATGTTTGGTTTTGTAGAGCTTTTAAT
GATGTCTCAACAATTCCTTTTAACAAAGGATTCAGCCATCTCTTTGGTGATGGAAATATT
CTTCATGCTAACGATGATAACAGCCTTCAACTTCATCTCAACCAAAACACAGGTTCAGGG
TTCAAGTCTTCTGACCTTTACAACCATGGTTTCTTCAGTGCTAAAATTAAATTGCCATCA
GATTATACTGCAGGAATAGTTGTTGCCTTCTATACGACGAATCAAGATGTATTTAAGAAG
ACACACGATGAACTAGATTTTGAATTTTTGGGAAATATAAAAGGAAAAGCATGGAGATTT
CAAACAAATATGTATGGAAATGGAAGCACACATAGAGGAAGAGAAGAAAGATATACTCTA
TGGTTTGATCCTTCTAAAGAGTTCCATCGTTATAGTATTTTGTGGACCAACAAAAACATC
ATATTTTATATAGATGATGTTCCAATTAGAGAAATTGTAAGAAATGATGCAATGGGTGGA
GACTACCCATCAAAGCCAATGGGCCTATATGCAACAATTTGGGATGCTTCAGATTGGGCT
ACTTCAGGTGGAAAATACAAAACAAATTACAAATATGCACCATTTATAGCTGAATTTACT
GATTTAGTACTCAATGGATGTGCAATGGACCCATTGGAACAAGTTGTAAACCCTAGTCTT
TGTGATGAAAAAGATGTTGAACTCCAAAAGTCGGATTTTTCAAGGATTACATCGAGACAA
AGAATGTCCATGAAAAGATTTAGGGCGAAATATATGTACTATTCTTACTGTTACGATTCA
TTGAGATACTCAGTGCCACCACCAGAGTGCGAGATTGATCCAGTTGAGCAACAACATTTT
AAAGAGACTGGAAGGTTGAAGTTTATAAACAAGCACCACGGACATCGTCATCCTAAGAAA
ACAAAAAGTGAAGTTCTTGATGCTAGGAAGTATGGAAATGAAGATGAAGAGTGA

Peptide Sequence

PEP ID

Solyc01g081060.3.1
PEP Infomation

xyloglucan endotransglucosylase-hydrolase XTH5
Sequence

MKICLSVLFFFHVWFCRAFNDVSTIPFNKGFSHLFGDGNILHANDDNSLQLHLNQNTGSG
FKSSDLYNHGFFSAKIKLPSDYTAGIVVAFYTTNQDVFKKTHDELDFEFLGNIKGKAWRF
QTNMYGNGSTHRGREERYTLWFDPSKEFHRYSILWTNKNIIFYIDDVPIREIVRNDAMGG
DYPSKPMGLYATIWDASDWATSGGKYKTNYKYAPFIAEFTDLVLNGCAMDPLEQVVNPSL
CDEKDVELQKSDFSRITSRQRMSMKRFRAKYMYYSYCYDSLRYSVPPPECEIDPVEQQHF
KETGRLKFINKHHGHRHPKKTKSEVLDARKYGNEDEE*

Transcript Sequence

Transcript ID

Solyc01g081060.3.1
Transcript Infomation

xyloglucan endotransglucosylase-hydrolase XTH5
Sequence

ATGAAAATATGTCTTTCTGTCTTATTTTTTTTCCATGTTTGGTTTTGTAGAGCTTTTAAT
GATGTCTCAACAATTCCTTTTAACAAAGGATTCAGCCATCTCTTTGGTGATGGAAATATT
CTTCATGCTAACGATGATAACAGCCTTCAACTTCATCTCAACCAAAACACAGGTTCAGGG
TTCAAGTCTTCTGACCTTTACAACCATGGTTTCTTCAGTGCTAAAATTAAATTGCCATCA
GATTATACTGCAGGAATAGTTGTTGCCTTCTATACGACGAATCAAGATGTATTTAAGAAG
ACACACGATGAACTAGATTTTGAATTTTTGGGAAATATAAAAGGAAAAGCATGGAGATTT
CAAACAAATATGTATGGAAATGGAAGCACACATAGAGGAAGAGAAGAAAGATATACTCTA
TGGTTTGATCCTTCTAAAGAGTTCCATCGTTATAGTATTTTGTGGACCAACAAAAACATC
ATATTTTATATAGATGATGTTCCAATTAGAGAAATTGTAAGAAATGATGCAATGGGTGGA
GACTACCCATCAAAGCCAATGGGCCTATATGCAACAATTTGGGATGCTTCAGATTGGGCT
ACTTCAGGTGGAAAATACAAAACAAATTACAAATATGCACCATTTATAGCTGAATTTACT
GATTTAGTACTCAATGGATGTGCAATGGACCCATTGGAACAAGTTGTAAACCCTAGTCTT
TGTGATGAAAAAGATGTTGAACTCCAAAAGTCGGATTTTTCAAGGATTACATCGAGACAA
AGAATGTCCATGAAAAGATTTAGGGCGAAATATATGTACTATTCTTACTGTTACGATTCA
TTGAGATACTCAGTGCCACCACCAGAGTGCGAGATTGATCCAGTTGAGCAACAACATTTT
AAAGAGACTGGAAGGTTGAAGTTTATAAACAAGCACCACGGACATCGTCATCCTAAGAAA
ACAAAAAGTGAAGTTCTTGATGCTAGGAAGTATGGAAATGAAGATGAAGAGTGATTCAAA
GTTTTGTTTACTAATAGTAATATTGTTGGTGTGTATATAGATAAAAGGAGGGAAAGAGTG
AATTCGTTTATTTTTCTTGGATTATAGATTTTGTTATAGGATATATTGTCAGAGTGAAGG
GTGAAAAATGATTATATATAAAGTGTGAACACTGATTGAGTAGTTATATTGTAATATAAA
TAAAGAGATTGAATTATGTATATTGAATTACTATTAAAGACTCCATACATTTCTTATTCT
TCAAATTAAATAATCATATTTCATATAATATCATGATCCGATGAACTTCCCG