Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g080790.3.1
CDS Infomation

Plant basic secretory family protein (AHRD V3.3 *** B9GHT3_POPTR)
Sequence

ATGGCTCATAACATTTTCTTCGTTTCTTTTTTATTTGTCTTGGCTATATTCACCCAAAAA
ATGGAAGCGGTAGATTACTTTGTTACAAACACGGCTGCAAACACCCCTGGTGGTGCCCGT
TTCGACCGAGATATCGGAGCTCAATATAGTCAACAAACATTGGTAGCTGCCACTTCCTTC
ATATGGAACATCTTCCAACAGAATTCTCCGGCTGACCGTAAAGACGTGCCAAAAGTAAAT
ATGTTTGTCGATGACATGGACGGAGTAGCTTACGCTAGCAACAATGAGATTCACGTTAGT
GCAAGGTACATCCAAGGTTACTCTGGGGATGTTAGGAGAGAGATCATTGGAGTATTATAC
CACGAAGCCACTCATGTTTGGCAGTGGAATGCGAACAATGGGGCTCCCGAAGGATTAATT
GAAGGGATTGCTGATTATGTGAGGCTCAAAGCTGGTCTTGGTCCAAGCCACTGGGTGAAA
CCTGGCCAGGGCGATCGTTGGGACCAAGGCTACGACGTGACTGCTCAATTTCTTGATTAC
TGCAACAACTTGAGAAATGGATTTGTGGCAGAACTTAACAAGAAAATGAGAAATGGCTAT
AATGATCAGTTCTTTGTTGACTTACTAGGGAAGACAGTTAATCAACTTTGGGGCGATTAC
AAAGCTAAATTTCGTGCATAA

Peptide Sequence

PEP ID

Solyc01g080790.3.1
PEP Infomation

Plant basic secretory family protein (AHRD V3.3 *** B9GHT3_POPTR)
Sequence

MAHNIFFVSFLFVLAIFTQKMEAVDYFVTNTAANTPGGARFDRDIGAQYSQQTLVAATSF
IWNIFQQNSPADRKDVPKVNMFVDDMDGVAYASNNEIHVSARYIQGYSGDVRREIIGVLY
HEATHVWQWNANNGAPEGLIEGIADYVRLKAGLGPSHWVKPGQGDRWDQGYDVTAQFLDY
CNNLRNGFVAELNKKMRNGYNDQFFVDLLGKTVNQLWGDYKAKFRA*

Transcript Sequence

Transcript ID

Solyc01g080790.3.1
Transcript Infomation

Plant basic secretory family protein (AHRD V3.3 *** B9GHT3_POPTR)
Sequence

ATCACTAGCATAGCAAATAAGCAATGGCTCATAACATTTTCTTCGTTTCTTTTTTATTTG
TCTTGGCTATATTCACCCAAAAAATGGAAGCGGTAGATTACTTTGTTACAAACACGGCTG
CAAACACCCCTGGTGGTGCCCGTTTCGACCGAGATATCGGAGCTCAATATAGTCAACAAA
CATTGGTAGCTGCCACTTCCTTCATATGGAACATCTTCCAACAGAATTCTCCGGCTGACC
GTAAAGACGTGCCAAAAGTAAATATGTTTGTCGATGACATGGACGGAGTAGCTTACGCTA
GCAACAATGAGATTCACGTTAGTGCAAGGTACATCCAAGGTTACTCTGGGGATGTTAGGA
GAGAGATCATTGGAGTATTATACCACGAAGCCACTCATGTTTGGCAGTGGAATGCGAACA
ATGGGGCTCCCGAAGGATTAATTGAAGGGATTGCTGATTATGTGAGGCTCAAAGCTGGTC
TTGGTCCAAGCCACTGGGTGAAACCTGGCCAGGGCGATCGTTGGGACCAAGGCTACGACG
TGACTGCTCAATTTCTTGATTACTGCAACAACTTGAGAAATGGATTTGTGGCAGAACTTA
ACAAGAAAATGAGAAATGGCTATAATGATCAGTTCTTTGTTGACTTACTAGGGAAGACAG
TTAATCAACTTTGGGGCGATTACAAAGCTAAATTTCGTGCATAACTTAAGAAATTCATAT
TAAATTGAATATGAGAAACATCATCTATTGCCTTTGTACCAATATTACAAGTATTTGTGT
CACGGTCTTGTACTCTTGTTGAAGATATTATTAATAATAAAAATAAGCACAAGTTATTTC
ATTCGTGTGAC