Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g080360.3.1
CDS Infomation

clathrin adaptor complexes medium subunit family protein (AHRD V3.3 *** AT2G20790.1)
Sequence

ATGCCGAGTTCGTGTTGTATCAGAGCTCTCTGGATCCTCACCAATCAAGACACCGTTGTT
TTCTCCCGGAGATTTCCGGTGGTGGAGAAGCGGTGGCGGGCGGCATGCGAGAGGAGTAAG
AGTTTTATGGAGGATGATTTGAAATATAATGTGGTGCCTTCTCTTCCTACTGATTCAGAG
ATAGCTGATGCTTTCGTTGACCGCAAGAAAAGGGAGGGATCTGCTCGTGGATTTGGCATT
AGGATAAATCAGTCAGTTGAAGGTTCAGATTCATGGGTTGATGATCCGATTACGCGTCAC
ATAATAAGTTTGTGCACTAAAAATGAAGAGGAAAAGAAACTTGTTTTGTGGCCACTTATT
TTGCACATAAAGGGACACTACTGTATCCTTGTACTGCCTTTAGTGGAACCAGATCATCTA
AAAACGTATACAAGGATGTGTAAAAGATCTGACTGTGGAAATGCTGTTGGAGCTGATGAA
AGTTTATCCCCCCTCCTGCTCAATCTTCCATCAATCACAGGGGCATTTATGGTTGGCCAC
ATGATAGGAGACATCATAACAGGCGATGTGACAGAACCTGAAATAGTCATAAGTGCATCT
CCATCAGTGGGTGGGTTGTTGGATTCTCTCACCGGAAGTATTGGTATTTCGGCAAGAGCA
AAACCTGTAGCTGCTCCTGTTGCAGGATCAACAGCTTCTGGAGCTGCAGCAAGCGGAGCA
ATGGCATCTGATGCTCCAAAGATTGGTTTGAGGTCTCTGGATAGAGATGCGATTCGCTCT
TTCATAAGCAGTGCAATGCCTTTTGGCACCCCTCTGGATCTTAACTACACCAACATTTCA
GCAGTTAAGATGAATGGATTTTCTTCAGCAGACATCCCTCCTGCAGATCAGAAGCAGCCA
GCATGGAAACCTTATCTTTATAGAGGGAAGCAGAGAATTCTTTTTACAATTCACGAGACA
GTCCATGCTGCCATGTATGATCGCGATGAAATTCCAGATAGCAAAAAGATTTCAGGTCAA
GTTAACTGTCGAGCGGAATTAGAAGGGTTGCCTGATGTGATGTTTCCACTAATAGGTTTG
GACACTGCTCGTGTTGAGCTGTTATCCTTCCACCCCTGTGCTCAAGTTCCAGAGCATGGT
AATGAGAAGCAATCACTTATGTTCTCACCACCATTAGGAAGTTTTGTATTGATGCGTTAT
CAGGCATTTTGTGGTATGGGACCTCCAATTAAGGGTTTTTATCAGCTTTCAATGGTTTCT
GAAAATGAAGGTGCATTTTTGTTTAAGTTACGGCTCATGGAAGGTTATAGAGCTCCTCTG
TCAATGGATTTCTGCACTGTGACAATGCCCTTCCCTAGGAGAAGGGTACTTTCTTTTGAT
GGCACACCTTCTATTGGAACAGTTTCAGTTGCTGAACACTTGGTTGAATGGAAAATTATA
ACGACTGGTCGAGGAATTTCAGGAAAAAGTGTTGAGGCAACATTTCCAGGAACAGTGAAG
TTCGCTCCATGGCAACCTCAAAGATTGCCTACCTCAGGGGCAGTACTTGGGAATATGGAA
GATGAAGAGAGTGATGCTGAAACAGAGTCAACAAATAATATGGCAAATGTGGAAGATTTC
TTAATGGAAAAAATGAACAAGGATCTTCAAGCAGTTGATTTGGAGGAGCCATTTTGCTGG
CAAGCATATGATTATGCTAAAGTATCTTTCAAGATAATGGGAGGATCATTATCAGGAATG
TCTATTGATCCAAAATCTGTAAGCATTTTCCCTGCTGTTAAAGCACCCGTGGAATTTTCA
ACTCAGGTGACTTCTGGGGATTATATTTTGTGGAACACATTAGGAAAATGTCCGGTTGCT
GCCACACCCAAAGCATAG

Peptide Sequence

PEP ID

Solyc01g080360.3.1
PEP Infomation

clathrin adaptor complexes medium subunit family protein (AHRD V3.3 *** AT2G20790.1)
Sequence

MPSSCCIRALWILTNQDTVVFSRRFPVVEKRWRAACERSKSFMEDDLKYNVVPSLPTDSE
IADAFVDRKKREGSARGFGIRINQSVEGSDSWVDDPITRHIISLCTKNEEEKKLVLWPLI
LHIKGHYCILVLPLVEPDHLKTYTRMCKRSDCGNAVGADESLSPLLLNLPSITGAFMVGH
MIGDIITGDVTEPEIVISASPSVGGLLDSLTGSIGISARAKPVAAPVAGSTASGAAASGA
MASDAPKIGLRSLDRDAIRSFISSAMPFGTPLDLNYTNISAVKMNGFSSADIPPADQKQP
AWKPYLYRGKQRILFTIHETVHAAMYDRDEIPDSKKISGQVNCRAELEGLPDVMFPLIGL
DTARVELLSFHPCAQVPEHGNEKQSLMFSPPLGSFVLMRYQAFCGMGPPIKGFYQLSMVS
ENEGAFLFKLRLMEGYRAPLSMDFCTVTMPFPRRRVLSFDGTPSIGTVSVAEHLVEWKII
TTGRGISGKSVEATFPGTVKFAPWQPQRLPTSGAVLGNMEDEESDAETESTNNMANVEDF
LMEKMNKDLQAVDLEEPFCWQAYDYAKVSFKIMGGSLSGMSIDPKSVSIFPAVKAPVEFS
TQVTSGDYILWNTLGKCPVAATPKA*

Transcript Sequence

Transcript ID

Solyc01g080360.3.1
Transcript Infomation

clathrin adaptor complexes medium subunit family protein (AHRD V3.3 *** AT2G20790.1)
Sequence

CCTTTCTGAATTTTCCCAAAACTTGTTCCTCATCAGATAATTCCCTCAAATCGACAGCGG
CGTACGGACCGACGCCGTAGAAATGCAGTAAACGCCACAAAAACGGCGGTAAAAGTCGAA
CTCGGAGTAACGAGTAAATCACAGTAGAGTTTGTCTCCGGTGGGAAAATGCCGAGTTCGT
GTTGTATCAGAGCTCTCTGGATCCTCACCAATCAAGACACCGTTGTTTTCTCCCGGAGAT
TTCCGGTGGTGGAGAAGCGGTGGCGGGCGGCATGCGAGAGGAGTAAGAGTTTTATGGAGG
ATGATTTGAAATATAATGTGGTGCCTTCTCTTCCTACTGATTCAGAGATAGCTGATGCTT
TCGTTGACCGCAAGAAAAGGGAGGGATCTGCTCGTGGATTTGGCATTAGGATAAATCAGT
CAGTTGAAGGTTCAGATTCATGGGTTGATGATCCGATTACGCGTCACATAATAAGTTTGT
GCACTAAAAATGAAGAGGAAAAGAAACTTGTTTTGTGGCCACTTATTTTGCACATAAAGG
GACACTACTGTATCCTTGTACTGCCTTTAGTGGAACCAGATCATCTAAAAACGTATACAA
GGATGTGTAAAAGATCTGACTGTGGAAATGCTGTTGGAGCTGATGAAAGTTTATCCCCCC
TCCTGCTCAATCTTCCATCAATCACAGGGGCATTTATGGTTGGCCACATGATAGGAGACA
TCATAACAGGCGATGTGACAGAACCTGAAATAGTCATAAGTGCATCTCCATCAGTGGGTG
GGTTGTTGGATTCTCTCACCGGAAGTATTGGTATTTCGGCAAGAGCAAAACCTGTAGCTG
CTCCTGTTGCAGGATCAACAGCTTCTGGAGCTGCAGCAAGCGGAGCAATGGCATCTGATG
CTCCAAAGATTGGTTTGAGGTCTCTGGATAGAGATGCGATTCGCTCTTTCATAAGCAGTG
CAATGCCTTTTGGCACCCCTCTGGATCTTAACTACACCAACATTTCAGCAGTTAAGATGA
ATGGATTTTCTTCAGCAGACATCCCTCCTGCAGATCAGAAGCAGCCAGCATGGAAACCTT
ATCTTTATAGAGGGAAGCAGAGAATTCTTTTTACAATTCACGAGACAGTCCATGCTGCCA
TGTATGATCGCGATGAAATTCCAGATAGCAAAAAGATTTCAGGTCAAGTTAACTGTCGAG
CGGAATTAGAAGGGTTGCCTGATGTGATGTTTCCACTAATAGGTTTGGACACTGCTCGTG
TTGAGCTGTTATCCTTCCACCCCTGTGCTCAAGTTCCAGAGCATGGTAATGAGAAGCAAT
CACTTATGTTCTCACCACCATTAGGAAGTTTTGTATTGATGCGTTATCAGGCATTTTGTG
GTATGGGACCTCCAATTAAGGGTTTTTATCAGCTTTCAATGGTTTCTGAAAATGAAGGTG
CATTTTTGTTTAAGTTACGGCTCATGGAAGGTTATAGAGCTCCTCTGTCAATGGATTTCT
GCACTGTGACAATGCCCTTCCCTAGGAGAAGGGTACTTTCTTTTGATGGCACACCTTCTA
TTGGAACAGTTTCAGTTGCTGAACACTTGGTTGAATGGAAAATTATAACGACTGGTCGAG
GAATTTCAGGAAAAAGTGTTGAGGCAACATTTCCAGGAACAGTGAAGTTCGCTCCATGGC
AACCTCAAAGATTGCCTACCTCAGGGGCAGTACTTGGGAATATGGAAGATGAAGAGAGTG
ATGCTGAAACAGAGTCAACAAATAATATGGCAAATGTGGAAGATTTCTTAATGGAAAAAA
TGAACAAGGATCTTCAAGCAGTTGATTTGGAGGAGCCATTTTGCTGGCAAGCATATGATT
ATGCTAAAGTATCTTTCAAGATAATGGGAGGATCATTATCAGGAATGTCTATTGATCCAA
AATCTGTAAGCATTTTCCCTGCTGTTAAAGCACCCGTGGAATTTTCAACTCAGGTGACTT
CTGGGGATTATATTTTGTGGAACACATTAGGAAAATGTCCGGTTGCTGCCACACCCAAAG
CATAG