Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g080280.3.1
CDS Infomation

chloroplast glutamine synthetase
Sequence

ATGGCTCAGATCCTGGCTCCGTCTGCACAATGGCAGATGAGAATGACAAAGAGCTCAACC
GATGCTAGTCCCTTGACTTCAAAGATGTGGAGCTCTGTGGTGCTGAAGCAGAACAAAAGA
CACGCTCTTAAAAGCTCTGCCAAATTTAGAGTTTTTGCCCTACAGTCTGACAATGGCACC
GTGAACAGAGTGGAACAGCTGCTAAACTTGGACGTAACTCCATACACTGATAAGATCATT
GCTGAATATATTTGGATCGGAGGGACTGGAATTGACATGCGCAGTAAATCAAGGACTATT
TCGAAACCAGTCAAGGATGCTTCTGAGCTCCCAAAGTGGAACTACGATGGATCAAGTACT
GGACAAGCACCTGGAGAAGACAGTGAAGTCATTCTATATCCTCAGGCAATATTCAAAGAC
CCTTTCCGTGGTGGTAACAACATCTTGGTTATCTGTGATGCCTACACACCAGCTGGAGAG
CCAATTCCTACAAACAAACGCCATAAAGCTGCTCAAATTTTTAGCGACCCAAAAGTTGCA
GCTCAAGTTCCATGGTTTGGAATAGAACAAGAGTACACCTTACTCCAGCCAAATGTAAAC
TGGCCCTTAGGTTGGCCTGTTGGAGGCTACCCCGGACCTCAGGGTCCTTACTACTGTGGT
GCTGGAGCGGAAAAGTCATTTGGCAGAGATATATCAGATGCTCACTACAAGGCTTGCCTG
TATGCTGGAATTAACATTAGTGGTACTAATGGAGAGGTTATGCCAGGACAGTGGGAATTT
CAAGTAGGTCCTAGTGTTGGAATTGAAGGTGGAGATCATATCTGGTGTGCTAGATACCTC
CTCGAGAGAATTACTGAACAAGCAGGAGTTGTCCTCTCACTCGATCCAAAACCAATTGAG
GGTGACTGGAACGGTGCAGGATGCCACACTAACTACAGTACACTGAGTATGAGAGAAGAG
GGAGGTTTTGAAGTTATAAAGAAAGCAATTCTGAATCTATCCCTTCGCCACAAGGAACAT
ATAAGTGCTTATGGAGAAGGAAATGAGAGAAGGTTGACCGGAAAGCATGAAACTGCTAGT
ATTGACCAATTTTCATGGGGAGTTGCTAACCGTGGTTGCTCAATCCGTGTGGGGCGTGAC
ACTGAGAAGGAAGGCAAGGGTTATTTGGAAGACCGCCGCCCAGCTTCAAACATGGACCCC
TATGTTGTGACTGGATTACTTGCTGAAACTACTATACTGTGGGAGCCAACCCTTGAGGCT
GAAGCTCTTGCTGCCCAAAAGATCTCATTGAAGGTTTAG

Peptide Sequence

PEP ID

Solyc01g080280.3.1
PEP Infomation

chloroplast glutamine synthetase
Sequence

MAQILAPSAQWQMRMTKSSTDASPLTSKMWSSVVLKQNKRHALKSSAKFRVFALQSDNGT
VNRVEQLLNLDVTPYTDKIIAEYIWIGGTGIDMRSKSRTISKPVKDASELPKWNYDGSST
GQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPAGEPIPTNKRHKAAQIFSDPKVA
AQVPWFGIEQEYTLLQPNVNWPLGWPVGGYPGPQGPYYCGAGAEKSFGRDISDAHYKACL
YAGINISGTNGEVMPGQWEFQVGPSVGIEGGDHIWCARYLLERITEQAGVVLSLDPKPIE
GDWNGAGCHTNYSTLSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETAS
IDQFSWGVANRGCSIRVGRDTEKEGKGYLEDRRPASNMDPYVVTGLLAETTILWEPTLEA
EALAAQKISLKV*

Transcript Sequence

Transcript ID

Solyc01g080280.3.1
Transcript Infomation

chloroplast glutamine synthetase
Sequence

GTGACCTTATTCAAACTAAAAACTATTTTCCGCCACTCAACAGACACCCCTATCTACAAT
GGAAAAGCCAAGAAACTTTCCATGTCCACTCAATTTTGTTACCTTTAAAATTAGACTTCC
TCAAAATAAGTTTTTGTTACTCACCCATCTTCATCTTCTTCTCTCACTCCTCTCAACACA
ACATTATTTTCTGCATTGTCCACTTAGTTGGTTAGGAGGTGAACATGGCTCAGATCCTGG
CTCCGTCTGCACAATGGCAGATGAGAATGACAAAGAGCTCAACCGATGCTAGTCCCTTGA
CTTCAAAGATGTGGAGCTCTGTGGTGCTGAAGCAGAACAAAAGACACGCTCTTAAAAGCT
CTGCCAAATTTAGAGTTTTTGCCCTACAGTCTGACAATGGCACCGTGAACAGAGTGGAAC
AGCTGCTAAACTTGGACGTAACTCCATACACTGATAAGATCATTGCTGAATATATTTGGA
TCGGAGGGACTGGAATTGACATGCGCAGTAAATCAAGGACTATTTCGAAACCAGTCAAGG
ATGCTTCTGAGCTCCCAAAGTGGAACTACGATGGATCAAGTACTGGACAAGCACCTGGAG
AAGACAGTGAAGTCATTCTATATCCTCAGGCAATATTCAAAGACCCTTTCCGTGGTGGTA
ACAACATCTTGGTTATCTGTGATGCCTACACACCAGCTGGAGAGCCAATTCCTACAAACA
AACGCCATAAAGCTGCTCAAATTTTTAGCGACCCAAAAGTTGCAGCTCAAGTTCCATGGT
TTGGAATAGAACAAGAGTACACCTTACTCCAGCCAAATGTAAACTGGCCCTTAGGTTGGC
CTGTTGGAGGCTACCCCGGACCTCAGGGTCCTTACTACTGTGGTGCTGGAGCGGAAAAGT
CATTTGGCAGAGATATATCAGATGCTCACTACAAGGCTTGCCTGTATGCTGGAATTAACA
TTAGTGGTACTAATGGAGAGGTTATGCCAGGACAGTGGGAATTTCAAGTAGGTCCTAGTG
TTGGAATTGAAGGTGGAGATCATATCTGGTGTGCTAGATACCTCCTCGAGAGAATTACTG
AACAAGCAGGAGTTGTCCTCTCACTCGATCCAAAACCAATTGAGGGTGACTGGAACGGTG
CAGGATGCCACACTAACTACAGTACACTGAGTATGAGAGAAGAGGGAGGTTTTGAAGTTA
TAAAGAAAGCAATTCTGAATCTATCCCTTCGCCACAAGGAACATATAAGTGCTTATGGAG
AAGGAAATGAGAGAAGGTTGACCGGAAAGCATGAAACTGCTAGTATTGACCAATTTTCAT
GGGGAGTTGCTAACCGTGGTTGCTCAATCCGTGTGGGGCGTGACACTGAGAAGGAAGGCA
AGGGTTATTTGGAAGACCGCCGCCCAGCTTCAAACATGGACCCCTATGTTGTGACTGGAT
TACTTGCTGAAACTACTATACTGTGGGAGCCAACCCTTGAGGCTGAAGCTCTTGCTGCCC
AAAAGATCTCATTGAAGGTTTAGAGTATATGAGGGGAAATTGTTTTCATAATAATCCTCT
TAGAATTTATGAGATAAGTTCTGAAGCTTGTACCTTGTTGAGGTTCCCTTATTTGGGAAA
ATCTTGTAAAGGAACCAAAATTTACCAGTTCATCCTAGAAAATAGGTTTCTTAAGACATG
AGACTACTTTGGAGTTGAGGTGTAATTGTTGGACTACTTTGAACATCTTTACCTTTCTTT
TCTCCAGATGAATCCATTTCTCTGAAATTCCAATTGGTGTGCTCTTTCCGAATGAAATCT
TTGAACATATAATCAGTCATGTACATTTCAGTTTCTAACTAGCTAGTTAAGTTACTTATA
TGATGTTATCTTCTGTCTACTATGTTCAAGTTCAGGTTCTTTAGA