Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g080160.3.1
CDS Infomation

DUF21 domain-containing protein (AHRD V3.3 *** A0A0B2P6Y2_GLYSO)
Sequence

ATGCAGCTGTTAAATGCAGTGGAAATAGCAAGAATGGCTATGAGGGCACCTAATTCTTTA
AGTGCAGAAATTGAATTTGGGACTGTTACATGGTTTGTATATGCTGGGATCTCATGTTTC
TTGGTACTATTTGCTGGAATTATGTCTGGTTTAACATTGGGTCTTATGTCTTTGGGGCTT
GTTGAACTTGAGATCCTTCAACGTAGTGGAACCCCTCTTGAGAAAAAACAAGCAGCTACA
ATATTTCCTGTTGTTCAGAAGCAACACCAGCTTCTTGTGACCCTCCTTCTATGCAACGCT
GCTTCGATGGAGGCACTACCTATATACCTGGACAAAATTTTCAACCAATATGTGGCCATT
ATACTATCAGTAACTTTTGTTTTGGCATTTGGAGAGGTTATTCCTCAAGCCATATGCACC
AGATATGGACTTGCCGTAGGTGCAAGCCTTGTCTGGCTTGTTCGTGTTCTGATGGTTATA
TGCTACCCAATTGCTTACCCTATAGGAAAGATCCTGGACTGTGTGTTGGGACACAACGAA
GTACTATTCAGGCGTGCTCAGCTGAAAGCCCTTGTTTCTATTCACAGCCAAGAGGCCGGC
AAGGGAGGTGAACTTACACATGATGAGACAACAATCATTAGCGGAGCACTGGATTTGACT
GAGAAGACTGCTGAGGAGGCAATGACGCCCATTGAGTCAACATTTTCATTGGATGTCAAT
TCAAAGCTGGACTGGGAGGCAATGGGAAAAGTTCTTGCTAGGGGTCATAGCAGAGTTCCT
GTGTACTCTGGCAATCCAAAGAATATTATTGGTCTACTTCTGGTAAAAAGTCTTCTTACA
GTGCGGCCGGAAACAGAGACGCCAGTTAGTTCTGTTTCAATTCGAAGAATTCCTCGAGTT
CCTGCTGATATGCCGTTGTATGACATACTAAATGAGTTCCAAAAGGGTAGCAGTCATATG
GCTGCAGTAGTGAAGATTAAAGGAAAAAGCAAAAAACCTCCCTTGGTCATTGAGGAAGAG
AATTCTCAGGATGTTGCAGTCACTGGTGAAAGTTCTCTGTTAACTATACCTCGCTTGAAA
GCAAAGAATGATAAATCAGATAGTGTTGTTGTTGATATTGAAAAAGTTACAGTACCAGCA
GCGGTAAACTCACCGACATCTGGTGACTCACTGACAAATGCATTGACTCAGTCATCAGAT
GATATTGAGGATGGAGAAGTAATAGGTATTATCACATTGGAAGATGTATTCGAAGAACTT
TTACAGGAGGAAATAGTAGATGAGACCGATGAGTATGTTGACGTACATAGAAGGATACGC
GTGGCTGCTGCTGCAGCTGCTTCAGTTGTGGCACGAGCTCCATCAATTCGTAGATTAACA
GCCCAAAAGGCAGCTGGAGGCCAAAATAAGGAAGGACATAGCCCCAAGAAGTCCAGTGAG
GACCTTTCTACCTCAAGAAGAATACAAGGGAGTTTAAGGGAGCCTCTTCTTGAGAACAAG
AGATAA

Peptide Sequence

PEP ID

Solyc01g080160.3.1
PEP Infomation

DUF21 domain-containing protein (AHRD V3.3 *** A0A0B2P6Y2_GLYSO)
Sequence

MQLLNAVEIARMAMRAPNSLSAEIEFGTVTWFVYAGISCFLVLFAGIMSGLTLGLMSLGL
VELEILQRSGTPLEKKQAATIFPVVQKQHQLLVTLLLCNAASMEALPIYLDKIFNQYVAI
ILSVTFVLAFGEVIPQAICTRYGLAVGASLVWLVRVLMVICYPIAYPIGKILDCVLGHNE
VLFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVN
SKLDWEAMGKVLARGHSRVPVYSGNPKNIIGLLLVKSLLTVRPETETPVSSVSIRRIPRV
PADMPLYDILNEFQKGSSHMAAVVKIKGKSKKPPLVIEEENSQDVAVTGESSLLTIPRLK
AKNDKSDSVVVDIEKVTVPAAVNSPTSGDSLTNALTQSSDDIEDGEVIGIITLEDVFEEL
LQEEIVDETDEYVDVHRRIRVAAAAAASVVARAPSIRRLTAQKAAGGQNKEGHSPKKSSE
DLSTSRRIQGSLREPLLENKR*

Transcript Sequence

Transcript ID

Solyc01g080160.3.1
Transcript Infomation

DUF21 domain-containing protein (AHRD V3.3 *** A0A0B2P6Y2_GLYSO)
Sequence

TATATAGAGAAAAAAAAAGAATATCCATTTTGTTCTTGGGTTTGTGATTTTGTCTCGTGA
AAAAGAAGAAGAAGAATTAATTATGCAGCTGTTAAATGCAGTGGAAATAGCAAGAATGGC
TATGAGGGCACCTAATTCTTTAAGTGCAGAAATTGAATTTGGGACTGTTACATGGTTTGT
ATATGCTGGGATCTCATGTTTCTTGGTACTATTTGCTGGAATTATGTCTGGTTTAACATT
GGGTCTTATGTCTTTGGGGCTTGTTGAACTTGAGATCCTTCAACGTAGTGGAACCCCTCT
TGAGAAAAAACAAGCAGCTACAATATTTCCTGTTGTTCAGAAGCAACACCAGCTTCTTGT
GACCCTCCTTCTATGCAACGCTGCTTCGATGGAGGCACTACCTATATACCTGGACAAAAT
TTTCAACCAATATGTGGCCATTATACTATCAGTAACTTTTGTTTTGGCATTTGGAGAGGT
TATTCCTCAAGCCATATGCACCAGATATGGACTTGCCGTAGGTGCAAGCCTTGTCTGGCT
TGTTCGTGTTCTGATGGTTATATGCTACCCAATTGCTTACCCTATAGGAAAGATCCTGGA
CTGTGTGTTGGGACACAACGAAGTACTATTCAGGCGTGCTCAGCTGAAAGCCCTTGTTTC
TATTCACAGCCAAGAGGCCGGCAAGGGAGGTGAACTTACACATGATGAGACAACAATCAT
TAGCGGAGCACTGGATTTGACTGAGAAGACTGCTGAGGAGGCAATGACGCCCATTGAGTC
AACATTTTCATTGGATGTCAATTCAAAGCTGGACTGGGAGGCAATGGGAAAAGTTCTTGC
TAGGGGTCATAGCAGAGTTCCTGTGTACTCTGGCAATCCAAAGAATATTATTGGTCTACT
TCTGGTAAAAAGTCTTCTTACAGTGCGGCCGGAAACAGAGACGCCAGTTAGTTCTGTTTC
AATTCGAAGAATTCCTCGAGTTCCTGCTGATATGCCGTTGTATGACATACTAAATGAGTT
CCAAAAGGGTAGCAGTCATATGGCTGCAGTAGTGAAGATTAAAGGAAAAAGCAAAAAACC
TCCCTTGGTCATTGAGGAAGAGAATTCTCAGGATGTTGCAGTCACTGGTGAAAGTTCTCT
GTTAACTATACCTCGCTTGAAAGCAAAGAATGATAAATCAGATAGTGTTGTTGTTGATAT
TGAAAAAGTTACAGTACCAGCAGCGGTAAACTCACCGACATCTGGTGACTCACTGACAAA
TGCATTGACTCAGTCATCAGATGATATTGAGGATGGAGAAGTAATAGGTATTATCACATT
GGAAGATGTATTCGAAGAACTTTTACAGGAGGAAATAGTAGATGAGACCGATGAGTATGT
TGACGTACATAGAAGGATACGCGTGGCTGCTGCTGCAGCTGCTTCAGTTGTGGCACGAGC
TCCATCAATTCGTAGATTAACAGCCCAAAAGGCAGCTGGAGGCCAAAATAAGGAAGGACA
TAGCCCCAAGAAGTCCAGTGAGGACCTTTCTACCTCAAGAAGAATACAAGGGAGTTTAAG
GGAGCCTCTTCTTGAGAACAAGAGATAAATAGTAAGTTAAAACTTCTCTATCTCAGTAAT
GTGTAAAACCAGAGTCTGCAAACGCCGAGGAAAGGAAAAAAAAATGCTCGTGCAATTTGC
ACATATAATTTTGTGAGGATATACTTATTTATGTGAATACATGCTCACTGTATGATGATA
TATCGCAGATTCATTAATTTTATGGGTATACTATGATTTTCCATGTTGCTTTGTAAGGAC
AAATTAATAGTAACTACGAATAAGCCTCCCTTTCTTGGCAAAGAAATGAAATTCTGAAGC
TGGTTTCATGTTCCCCACTTAAAAAA