Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g080050.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G06120.1)
Sequence

ATGTCTCACATAGCAGTGGAGAGAAACAGGAGAAGACAAATGAATGAAAATCTCAAGGTT
TTGCGTTCCTTAACTCCTTGTTTCTACATCAAAAGGGGTGATCAAGCATCAATAATAGCA
GGAGTGATTGAATTCATCAAGGAATTACACCTTGTTCTTCAATCTCTTGAGGCGAAAAAG
CGACGAAAGAGTCTAAGCCCTAGCCCTGGTCCTACTACTCCAAGGCCATTGCAACTAAGT
CCTACACCTGAAAGTAGTCCATTTATTACTCATAATAATAACTTCAAGGAACTTGGAGCA
TGTTGTAATTCTCCAGTGGCTGATGTTGAAGCAAGAATATGTGGGTCAAATGTTATGTTG
AGAACAATTTCAAAGAGGATTCCAGGTCAAATTGTGAAGATAATCAATGTGCTAGAGAAA
CTTTCTTTTGAGATTCTTCATCTCAACATCAGTACCATGCAGGATACTGTTCTATACTCC
TTTGTCATCAAGATAGGACTGGAGTGCCAACTTAGTGTGGAAGAGCTAGCACTGGAAGTT
CAAAAAAGCTTCACCTCATCTGATGTTTTATGTATCAACGAGATATAG

Peptide Sequence

PEP ID

Solyc01g080050.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G06120.1)
Sequence

MSHIAVERNRRRQMNENLKVLRSLTPCFYIKRGDQASIIAGVIEFIKELHLVLQSLEAKK
RRKSLSPSPGPTTPRPLQLSPTPESSPFITHNNNFKELGACCNSPVADVEARICGSNVML
RTISKRIPGQIVKIINVLEKLSFEILHLNISTMQDTVLYSFVIKIGLECQLSVEELALEV
QKSFTSSDVLCINEI*

Transcript Sequence

Transcript ID

Solyc01g080050.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G06120.1)
Sequence

GCGAATAAATATTAGAGTAATTTTTTTAATAACAAAGTTTGGTTTTTTTGGGGTGACAGT
GAAAAAGCAACCAGTTCCACTAACTATATACAATTACTTCATTGATCTTTATTAGATGAC
TAATCGATTACACACCTCTTGTGGTACACCCATCACCTATATATCTACTAACACACAAAA
GATAAGGTGGGCGGTCATCCTCTATTTGACATCAAAGAAAAGAAAATTAATATAACCTAT
TAGTAGAAACATATATATACATATATCTGTGGGCAAAAACTGATAAAATCAAGTTGACTT
TAAAATGAGAAAATAAAAAATATAAAAATAAAATAAACAAATTATCATAATAAGAAGGTG
GTGAAATGTATGCAGAATTTAGAGTGCATGCACGAACCATACATGAAGTAAGAAGCAAAA
GAATTAAGAGCAGCTCTTCTACATGACAATAAATAAATAAACATATAAATAAGAAATTAC
TACTTGTTATATTCTTTTATCTCACGCTGGGAACGTAAATGTCCATATGGTAATAAACGT
GAGACCTATAATATATATTGTATATTGTCCACAAACATATATATATATATATATATATAT
ATACACACACATAATATATGTTACGTGTTTATTTATGTAATATTATATTTGTTGTATCTC
ATATATAAAAGACTGCGTGTGAAAATAAATTAACAGTCACGGGAGAACAACACATAGCAT
TTAATAAGAAAAAAATATAGACTGATAGTTAGGTATATCCCAACACTATACAACTAGTTA
TTCTTTTACATTTTTTCTTATGTCACTATATATATAAAGCTCTTTGAGAGACAAAAGCAA
AATTGTAAAAACATAAAAACTTGCAATTTAGGTTTTTTTTTTTTAAGAAGAAAAAAAAAA
GTATCATGTCTCACATAGCAGTGGAGAGAAACAGGAGAAGACAAATGAATGAAAATCTCA
AGGTTTTGCGTTCCTTAACTCCTTGTTTCTACATCAAAAGGGGTGATCAAGCATCAATAA
TAGCAGGAGTGATTGAATTCATCAAGGAATTACACCTTGTTCTTCAATCTCTTGAGGCGA
AAAAGCGACGAAAGAGTCTAAGCCCTAGCCCTGGTCCTACTACTCCAAGGCCATTGCAAC
TAAGTCCTACACCTGAAAGTAGTCCATTTATTACTCATAATAATAACTTCAAGGAACTTG
GAGCATGTTGTAATTCTCCAGTGGCTGATGTTGAAGCAAGAATATGTGGGTCAAATGTTA
TGTTGAGAACAATTTCAAAGAGGATTCCAGGTCAAATTGTGAAGATAATCAATGTGCTAG
AGAAACTTTCTTTTGAGATTCTTCATCTCAACATCAGTACCATGCAGGATACTGTTCTAT
ACTCCTTTGTCATCAAGATAGGACTGGAGTGCCAACTTAGTGTGGAAGAGCTAGCACTGG
AAGTTCAAAAAAGCTTCACCTCATCTGATGTTTTATGTATCAACGAGATATAGATCAATT
TACAAAATTAAATAATACTCTAGTAATATCTAGCTAATTATGTACTCCCCATCTAATATT
TATCTTCTTATGCTTTATTGCTATATATCTTTTGGATATATGTATACAAAGTGTAAGAAG
ATAATTTTGGAATGTAACAAATAATTTCCAACATTTTAAGGTTGGATTTAGTATGTGAAA
TGTTGCACTATTATATGACTAGATATACTTCTGAATTAGAAAAATTTGAGGATATATATT
AATACGTACTATTATTTTATTTATATATAGAAAGATAGACTTTATCTTTGTATCTTTTTG
TTATTTTATATGTTATTATAAGAGAAGAAAGTAGTTGCATGCAGTACTTGGGTTTTAAAT
ATATATATATTTTTTTTCATGTTGCAATGGATGCTTTACAACGTTATTAATTATATTGTG
TCTTATTTGGACGTTAATTACTCAAGTTTGGATATATCATATATGGATTACACCCAATCT
TTTACTCTGAAAGTGATCAAATTAAGTTCATGAAGCCAAAC