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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g079950.3.1
CDS Infomation

Xyloglucan-specific endoglucanase inhibitor protein 2 (AHRD V3.3 *** F1DHN5_SOLTU)
Sequence

TTGTCTAATACCACTTGCTTTATTCTTTCTCTGTCTAACATAATGTCATTGAAACTTCCT
TTATCTATGCTTGTCATTTTTCTTCAACTTGATATTTTTGTATGTTCATCTGAAGTATTA
TATCTTCCAGTCACTAAAGATGCATTAACTTTACAATACATTACAGAAGTAAGTCAAAGA
ACTCCTTTAATTCCCATAAAACTTTTAGTCCATCTTGGTGGTAGAAGTTTATGGGTGGAT
TGTGACAAAGGTTTCAAAAGTTCAACTTACAAACCTGGTGTATGTAATTCCACACAATGC
ACTTATTCCAATCCTAATTACTGTGGTGACTGCATATTGAAACCTAAACTTCAGCCTGGA
TGTAACAACAATAGTTGTTACATTTGGGGTGAAAATCCCTTGATCGATTGGTTTGATGAT
AGCGCTGAAATTGCTGATGATGTATTGGTTATTGGTTCTACTCCTGGTGTTCCTCTAACT
TGGCCGCGATTTGTTTTTGCTTGCTTTGTTAGTCCCAATATGGTGAGACTTCTCGCCAAT
GGAGTCACAGGGATTGCAGGTTTTGGACGTGAAAGTCCAATTTCCATACCCAATCAACTT
GCTTTAGACTCTAGATTCACCAAGAAATTTGGTATATGTTTGAGTTCATCTACAACATCT
CCTGGAGTTATCTTCATCGGTTCTGGTCCATATTATGTTTACAATCCTAAGAAGATCGAC
ATATCAAACAATATTCTCTACACCAAATTAATCGCAAATAAAAATGCATTTTTGGTAACT
CAAGAGTACTATATCCAAGTTTCTTGCATCAAAATCGCGGGACAACAAGTTCCACTAAAT
AAAACATTGCTATCTATTAATAAAAAAGATATAGATGGTGGGACGAGAATCAGCACAGCG
TCACCTTACACAATTTTACACCCTAGCATTTACGATGCTTTTAAAACTGCTTTCATCAAC
GCGCTTCCAAAGAACGTGGCAATTGTAGAGCCTCCTATGAAACAATTTGGACTTTGCTTT
AGTTCGAAAAACATTAAAATTACTAACGTTGGACTAGATGTTCCTGTGATAGATTTTGTT
TTGCATAAACCGAGTGCGTATTGGAGGATTTATGGAACAAATTCAGTGGTACAAGTTAGT
AAGGATGTTATGTGTTTAGCATTTGTGAAACAAAATGAAGAAAGGCAACCATCAATTGTT
ATAGGAGGGCATCAATTGGAAGAGAACCTATTGATACTTGACCTTCCACAAAAGAAGATT
GGTTTCAGCTCCTCACTCAAATTTCAACAAACATCATGCTCTCAGTATGACAATACAATT
CTAGGCTAA

Peptide Sequence

PEP ID

Solyc01g079950.3.1
PEP Infomation

Xyloglucan-specific endoglucanase inhibitor protein 2 (AHRD V3.3 *** F1DHN5_SOLTU)
Sequence

LSNTTCFILSLSNIMSLKLPLSMLVIFLQLDIFVCSSEVLYLPVTKDALTLQYITEVSQR
TPLIPIKLLVHLGGRSLWVDCDKGFKSSTYKPGVCNSTQCTYSNPNYCGDCILKPKLQPG
CNNNSCYIWGENPLIDWFDDSAEIADDVLVIGSTPGVPLTWPRFVFACFVSPNMVRLLAN
GVTGIAGFGRESPISIPNQLALDSRFTKKFGICLSSSTTSPGVIFIGSGPYYVYNPKKID
ISNNILYTKLIANKNAFLVTQEYYIQVSCIKIAGQQVPLNKTLLSINKKDIDGGTRISTA
SPYTILHPSIYDAFKTAFINALPKNVAIVEPPMKQFGLCFSSKNIKITNVGLDVPVIDFV
LHKPSAYWRIYGTNSVVQVSKDVMCLAFVKQNEERQPSIVIGGHQLEENLLILDLPQKKI
GFSSSLKFQQTSCSQYDNTILG*

Transcript Sequence

Transcript ID

Solyc01g079950.3.1
Transcript Infomation

Xyloglucan-specific endoglucanase inhibitor protein 2 (AHRD V3.3 *** F1DHN5_SOLTU)
Sequence

TTGTCTAATACCACTTGCTTTATTCTTTCTCTGTCTAACATAATGTCATTGAAACTTCCT
TTATCTATGCTTGTCATTTTTCTTCAACTTGATATTTTTGTATGTTCATCTGAAGTATTA
TATCTTCCAGTCACTAAAGATGCATTAACTTTACAATACATTACAGAAGTAAGTCAAAGA
ACTCCTTTAATTCCCATAAAACTTTTAGTCCATCTTGGTGGTAGAAGTTTATGGGTGGAT
TGTGACAAAGGTTTCAAAAGTTCAACTTACAAACCTGGTGTATGTAATTCCACACAATGC
ACTTATTCCAATCCTAATTACTGTGGTGACTGCATATTGAAACCTAAACTTCAGCCTGGA
TGTAACAACAATAGTTGTTACATTTGGGGTGAAAATCCCTTGATCGATTGGTTTGATGAT
AGCGCTGAAATTGCTGATGATGTATTGGTTATTGGTTCTACTCCTGGTGTTCCTCTAACT
TGGCCGCGATTTGTTTTTGCTTGCTTTGTTAGTCCCAATATGGTGAGACTTCTCGCCAAT
GGAGTCACAGGGATTGCAGGTTTTGGACGTGAAAGTCCAATTTCCATACCCAATCAACTT
GCTTTAGACTCTAGATTCACCAAGAAATTTGGTATATGTTTGAGTTCATCTACAACATCT
CCTGGAGTTATCTTCATCGGTTCTGGTCCATATTATGTTTACAATCCTAAGAAGATCGAC
ATATCAAACAATATTCTCTACACCAAATTAATCGCAAATAAAAATGCATTTTTGGTAACT
CAAGAGTACTATATCCAAGTTTCTTGCATCAAAATCGCGGGACAACAAGTTCCACTAAAT
AAAACATTGCTATCTATTAATAAAAAAGATATAGATGGTGGGACGAGAATCAGCACAGCG
TCACCTTACACAATTTTACACCCTAGCATTTACGATGCTTTTAAAACTGCTTTCATCAAC
GCGCTTCCAAAGAACGTGGCAATTGTAGAGCCTCCTATGAAACAATTTGGACTTTGCTTT
AGTTCGAAAAACATTAAAATTACTAACGTTGGACTAGATGTTCCTGTGATAGATTTTGTT
TTGCATAAACCGAGTGCGTATTGGAGGATTTATGGAACAAATTCAGTGGTACAAGTTAGT
AAGGATGTTATGTGTTTAGCATTTGTGAAACAAAATGAAGAAAGGCAACCATCAATTGTT
ATAGGAGGGCATCAATTGGAAGAGAACCTATTGATACTTGACCTTCCACAAAAGAAGATT
GGTTTCAGCTCCTCACTCAAATTTCAACAAACATCATGCTCTCAGTATGACAATACAATT
CTAGGCTAAGCCCCTCTATTCTATATATGTAATTTTCTATTTCGATAATAAACTAGATGG
ACGATGCCCGTGTATTGCATAGGCGTATGACTAATTGTATCGTTTTATGTTCTTATCCTA
GATAATTTGCACTTTGT