Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g079940.3.1
CDS Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G03220.1)
Sequence

ATGGTGACATTCAAACTTCCTTTACCTATGCTTCTTTTGTTCCTTCTACTCAATATTTTT
GTATGCTCAAGTGAAGTACTATACATTCCAGTCACTAAAGATGCATCAACCCTAGAATAC
ACTATAGAAGTGGGTCAAAGAACTCCTTTAATCCCCATAAAACTCTTAATCAATCTTGGT
GGTAGAAGTTTATGGGTGGATTGTGACAAAGGTTACAAAAGTTCAACTTACAAACCAGCA
GTGTGTAATTCGACGCAATGCACTTTTTCCAAGTCACATGCCTGTGGGGATTGCATATTC
AAACCTCAAGTGCAACCTGGATGTAGCAATAATACTTGTTACATTTGGGGTGAAAATCCA
TTGATTAATTCGTTTCACGATCGCGCTGAACTTGCTGAGGATGTATTGACTATTGGTTCT
ACTCCTGGTGTTCCTCTAACTTGGCCGCGATTTATTTTCTCTTGCCTTCTTGATCAAGAT
ATGATGAGACAATTCGCAAATGGAGTCACAGGAGTTGCAGGTTTTGGACGTGAAAGTCCA
GTTTCCATTCCCAATCAACTTGCTTTAGACTCTAGATTCACCAAAAAGTTTGGTATATGT
TTGAGCTCATCTACACAATCTCGTGGGGTTATCTTCATCGGTTCTGGTCCATATAGTGTT
TACAATCCTAAAAAGATCGATATCTCCAACGATATTCTCTACACCAAACTTATCGCAAAT
ACAAGGGGTGGATTTGTTACATCTGAAGAGTACTATATCCAAGTTTCATCCATTCGAATC
GCTGGGCAAGACATTCCACTGAATAAAACATTGTTATCTATTAATAAGAAAAATGGAGTT
GCTGGGACAAGAATAAGCACAGCTACACCTTTTACAATATTACACACGACCATCTATGAT
GCTTTTAAAACTGCTTTCATCAAGGCGCTTCCTAAGAATGTGACAATTGTAGAGCCTCCT
ATGAAACCATATGGACTTTGCTTTAGTTCAAAAAACATTAAAAGTAGCAACGTTGGACCA
GATGTTCCTGTGATAGATTTTGTTTTGCATAAGCCGAGTGCGTTTTGGAGACTTTATGGG
ACAAATTCAGTGGTACAAGTTAGCAAGGATGTTATGTGTTTAGCATTTGTGGGACAAGAC
CAAACATGGGAACCTTCGATTGTTATAGGAGGACATCAAATGGAAGAGAACCTATTGGTA
TTTGACCTTGTCAGAAGGAATATAGGTTTCAGCTCATCACTCAAGCTTCAACAAGCATCA
TGTTCTAAGTACGATAATACCATTCCAGTCTAA

Peptide Sequence

PEP ID

Solyc01g079940.3.1
PEP Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G03220.1)
Sequence

MVTFKLPLPMLLLFLLLNIFVCSSEVLYIPVTKDASTLEYTIEVGQRTPLIPIKLLINLG
GRSLWVDCDKGYKSSTYKPAVCNSTQCTFSKSHACGDCIFKPQVQPGCSNNTCYIWGENP
LINSFHDRAELAEDVLTIGSTPGVPLTWPRFIFSCLLDQDMMRQFANGVTGVAGFGRESP
VSIPNQLALDSRFTKKFGICLSSSTQSRGVIFIGSGPYSVYNPKKIDISNDILYTKLIAN
TRGGFVTSEEYYIQVSSIRIAGQDIPLNKTLLSINKKNGVAGTRISTATPFTILHTTIYD
AFKTAFIKALPKNVTIVEPPMKPYGLCFSSKNIKSSNVGPDVPVIDFVLHKPSAFWRLYG
TNSVVQVSKDVMCLAFVGQDQTWEPSIVIGGHQMEENLLVFDLVRRNIGFSSSLKLQQAS
CSKYDNTIPV*

Transcript Sequence

Transcript ID

Solyc01g079940.3.1
Transcript Infomation

Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G03220.1)
Sequence

ATTGGCCTAATTATACAATTTGCTTCTTTTTCTTTCTTTGTCTAGCTAGCATGGTGACAT
TCAAACTTCCTTTACCTATGCTTCTTTTGTTCCTTCTACTCAATATTTTTGTATGCTCAA
GTGAAGTACTATACATTCCAGTCACTAAAGATGCATCAACCCTAGAATACACTATAGAAG
TGGGTCAAAGAACTCCTTTAATCCCCATAAAACTCTTAATCAATCTTGGTGGTAGAAGTT
TATGGGTGGATTGTGACAAAGGTTACAAAAGTTCAACTTACAAACCAGCAGTGTGTAATT
CGACGCAATGCACTTTTTCCAAGTCACATGCCTGTGGGGATTGCATATTCAAACCTCAAG
TGCAACCTGGATGTAGCAATAATACTTGTTACATTTGGGGTGAAAATCCATTGATTAATT
CGTTTCACGATCGCGCTGAACTTGCTGAGGATGTATTGACTATTGGTTCTACTCCTGGTG
TTCCTCTAACTTGGCCGCGATTTATTTTCTCTTGCCTTCTTGATCAAGATATGATGAGAC
AATTCGCAAATGGAGTCACAGGAGTTGCAGGTTTTGGACGTGAAAGTCCAGTTTCCATTC
CCAATCAACTTGCTTTAGACTCTAGATTCACCAAAAAGTTTGGTATATGTTTGAGCTCAT
CTACACAATCTCGTGGGGTTATCTTCATCGGTTCTGGTCCATATAGTGTTTACAATCCTA
AAAAGATCGATATCTCCAACGATATTCTCTACACCAAACTTATCGCAAATACAAGGGGTG
GATTTGTTACATCTGAAGAGTACTATATCCAAGTTTCATCCATTCGAATCGCTGGGCAAG
ACATTCCACTGAATAAAACATTGTTATCTATTAATAAGAAAAATGGAGTTGCTGGGACAA
GAATAAGCACAGCTACACCTTTTACAATATTACACACGACCATCTATGATGCTTTTAAAA
CTGCTTTCATCAAGGCGCTTCCTAAGAATGTGACAATTGTAGAGCCTCCTATGAAACCAT
ATGGACTTTGCTTTAGTTCAAAAAACATTAAAAGTAGCAACGTTGGACCAGATGTTCCTG
TGATAGATTTTGTTTTGCATAAGCCGAGTGCGTTTTGGAGACTTTATGGGACAAATTCAG
TGGTACAAGTTAGCAAGGATGTTATGTGTTTAGCATTTGTGGGACAAGACCAAACATGGG
AACCTTCGATTGTTATAGGAGGACATCAAATGGAAGAGAACCTATTGGTATTTGACCTTG
TCAGAAGGAATATAGGTTTCAGCTCATCACTCAAGCTTCAACAAGCATCATGTTCTAAGT
ACGATAATACCATTCCAGTCTAATTAGTCTTATGTAATTTTCTATTTCAATAATAGTAAA
CGATATTGTCATTGCCCGTGCGTTGCACAGGTGTATGATGTATATCGTTTTTTTTGTATT
CTTTTGAATGTCTTCAAGAACATAAAAAGGGATCAAGTGTACTTGTTTCAATATGAAGTA
ATACTTTTCTAATGACGTAATTTGGGTGTATCACTAGATTTGTAGCCAAATGGTACATTG
TAACGGGAAAGATAAATTATCAAGAAACCTTGTAGAAATGGTCAAAATCAAAATAATATT
AGCACTTGAGCATATATTTCAATGATTCAAATTTATAAGAAATCAGTTATACGCCCATTG
TATCAAGCCTTAGTGCAGAAAATTACTTTCCCTCATTTAGTATTGTACCAAATTAAATGA
CTGAATTGCAAGTGTTGTCACGAATTAAATATTTCACATGTGTATAACTACATAGTAATT
TATTTTTGTTGGTGTCTTGCCTTTAC