Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g079680.3.1
CDS Infomation	Ran GTPase activating protein 2 (AHRD V3.3 *** I7JP53_9SOLN)
Sequence	ATGGATGCCACAACAGATAACTCTCAGCGCAGACCGTTTTCAATTAAACTGTGGCCTCCA AGTGAGAACACAAGAAAAATGCTGGTGGAAAGAATGACGAATAATCTTTCTAGTCCAACC ATTTTCACCCGCAAGTACCGCAGTCTATCCAAGGAAGAGGCTGCCAAAAATGCTGAAGAA ATTGAAGATGCAGCTTTTACCATTGCTAATCAACATTATGAGAAGGAGCCTGATGGTGAT GGAAGTTCTGCTGTGCAACTTTATGCCAGGGAATGTAGCAAGCTTATCCTGGAAATTCTA AAAAAGACTCCCAAATCAGAGGACAAGGAAATTTCGATTTCTGAGGTAGTTCCTACTGTT CAGGAGACCTTTTTTGATATCTCAAAAGGTAAAAGGGCTTTTATTGAAGCGGAAGAGGCT CAAGAACTTTTAAAGCCATTAAAAGAGCCTGGAAACTCTTACAGCAAAATTTGTTTCAGC AATAGAAGCTTTGGTATAGATGCAGCACGTATTGCAGGCCCTATCTTGGCAACCTTGAAG GATCAGTTGAAGGAAGTTGATTTGTCAGATTTTGTTGCCGGAAGAAATGAGGCTGAAGCA CTTGATGTCATGAATATATTCTCAGAAGCTCTAGAAGGTTCTAACTTGAAGTTTCTGAAT CTCTCTGATAATGCTCTTGGTGAGAAGGGAGTTAGGGCATTTGGAAAGCTCCTTCAGTCT CAAACCAACTTGGAAGAATTATTTTTGATGAATGATGGGATTTCACAGGAAGCTGCAAAT GCTGTTAGCGAGCTAGTTCCTTCCACCGAGAAGCTTAAAATTCTTCATTTTCATAATAAT ATGACTGGTGATGAAGGGGCTGTTGCGATTGCGGAAATTGTGAAGCGCTCTCCTTTATTG GAAGATTTCAGGTGCTCTTCTACCAGGGTAGGTTCTGAAGGAGGGAGTGCCTTGTGCGAA GCACTTGGGATGTGCTCCCATTTGAAGAAGCTTGATTTGCGAGACAATATGTTTGGTCCA GAAGTTGGTCTTGTGTTGAGCAAGGCACTCAGCCAACATGAAAATCTTAAGGAAATTTAC CTGAGCTACCTTAATTTAGAGGATGAAGGAGCAATTGCAATAGCTAACGCTCTTAAAGAT TCAGCCCCTTCACTTGCTGTCTTGGAGATGGCAGGTAATGATATAACTGCTGAAGCTGCT TCAGCAATAGCTTCTTGTATAGCTGCAAAGCAGCTTCTTGCCAAGTTAAGCTTGGGTGAG AATGAACTCAAGGATGAAGGTGTAATTCAGATTGCCAAGGCATTGGAAGGACACAAACAT CTGACTGAAGTTGATATGAGCAGCAATGCACTAAGGAGGGCTGGGGCTAGGGTGCTGGCT CAAACTGTGCTGCAGAAAGATGAGTTTAAATTACTAAATGTTAATGGGAATTTCATCTCA GAAGAAGGCGTTGACGAGTTGAAAGAGATCTTCAAGAAATCTCCTGAAATGCTTGCATCC CTGGAAGATAATGACCCGGAAGGAGAAGACGAGGGTGACGAGGAGAAAGAATCTGGAGAT GAGGACGTTGAGGATGAACTAGAATCAAAACTGAAAAACCTGGACGTCAAGCAAGAGGCA AGTGTTGACGCACACGCACCAGATAGCAATTAG

Peptide Sequence

PEP ID	Solyc01g079680.3.1
PEP Infomation	Ran GTPase activating protein 2 (AHRD V3.3 *** I7JP53_9SOLN)
Sequence	MDATTDNSQRRPFSIKLWPPSENTRKMLVERMTNNLSSPTIFTRKYRSLSKEEAAKNAEE IEDAAFTIANQHYEKEPDGDGSSAVQLYARECSKLILEILKKTPKSEDKEISISEVVPTV QETFFDISKGKRAFIEAEEAQELLKPLKEPGNSYSKICFSNRSFGIDAARIAGPILATLK DQLKEVDLSDFVAGRNEAEALDVMNIFSEALEGSNLKFLNLSDNALGEKGVRAFGKLLQS QTNLEELFLMNDGISQEAANAVSELVPSTEKLKILHFHNNMTGDEGAVAIAEIVKRSPLL EDFRCSSTRVGSEGGSALCEALGMCSHLKKLDLRDNMFGPEVGLVLSKALSQHENLKEIY LSYLNLEDEGAIAIANALKDSAPSLAVLEMAGNDITAEAASAIASCIAAKQLLAKLSLGE NELKDEGVIQIAKALEGHKHLTEVDMSSNALRRAGARVLAQTVLQKDEFKLLNVNGNFIS EEGVDELKEIFKKSPEMLASLEDNDPEGEDEGDEEKESGDEDVEDELESKLKNLDVKQEA SVDAHAPDSN*

Transcript Sequence

Transcript ID	Solyc01g079680.3.1
Transcript Infomation	Ran GTPase activating protein 2 (AHRD V3.3 *** I7JP53_9SOLN)
Sequence	ATCTCTCGAGTACAAGATAGTCGAATATAAAAACACTGTTCCCACACAACACACAGCACA CATTGCTAACTTCATTTTCAGTTGAGATTTTCTTCACTTCCACTCTCTCCGGCGGCGCGT CGAACTCACACATTCTCTCTCGTTGTTTGCCGGTGAGTTACAACACACTCACTCCAACGG TTTTCTGCCAATGGATGCCACAACAGATAACTCTCAGCGCAGACCGTTTTCAATTAAACT GTGGCCTCCAAGTGAGAACACAAGAAAAATGCTGGTGGAAAGAATGACGAATAATCTTTC TAGTCCAACCATTTTCACCCGCAAGTACCGCAGTCTATCCAAGGAAGAGGCTGCCAAAAA TGCTGAAGAAATTGAAGATGCAGCTTTTACCATTGCTAATCAACATTATGAGAAGGAGCC TGATGGTGATGGAAGTTCTGCTGTGCAACTTTATGCCAGGGAATGTAGCAAGCTTATCCT GGAAATTCTAAAAAAGACTCCCAAATCAGAGGACAAGGAAATTTCGATTTCTGAGGTAGT TCCTACTGTTCAGGAGACCTTTTTTGATATCTCAAAAGGTAAAAGGGCTTTTATTGAAGC GGAAGAGGCTCAAGAACTTTTAAAGCCATTAAAAGAGCCTGGAAACTCTTACAGCAAAAT TTGTTTCAGCAATAGAAGCTTTGGTATAGATGCAGCACGTATTGCAGGCCCTATCTTGGC AACCTTGAAGGATCAGTTGAAGGAAGTTGATTTGTCAGATTTTGTTGCCGGAAGAAATGA GGCTGAAGCACTTGATGTCATGAATATATTCTCAGAAGCTCTAGAAGGTTCTAACTTGAA GTTTCTGAATCTCTCTGATAATGCTCTTGGTGAGAAGGGAGTTAGGGCATTTGGAAAGCT CCTTCAGTCTCAAACCAACTTGGAAGAATTATTTTTGATGAATGATGGGATTTCACAGGA AGCTGCAAATGCTGTTAGCGAGCTAGTTCCTTCCACCGAGAAGCTTAAAATTCTTCATTT TCATAATAATATGACTGGTGATGAAGGGGCTGTTGCGATTGCGGAAATTGTGAAGCGCTC TCCTTTATTGGAAGATTTCAGGTGCTCTTCTACCAGGGTAGGTTCTGAAGGAGGGAGTGC CTTGTGCGAAGCACTTGGGATGTGCTCCCATTTGAAGAAGCTTGATTTGCGAGACAATAT GTTTGGTCCAGAAGTTGGTCTTGTGTTGAGCAAGGCACTCAGCCAACATGAAAATCTTAA GGAAATTTACCTGAGCTACCTTAATTTAGAGGATGAAGGAGCAATTGCAATAGCTAACGC TCTTAAAGATTCAGCCCCTTCACTTGCTGTCTTGGAGATGGCAGGTAATGATATAACTGC TGAAGCTGCTTCAGCAATAGCTTCTTGTATAGCTGCAAAGCAGCTTCTTGCCAAGTTAAG CTTGGGTGAGAATGAACTCAAGGATGAAGGTGTAATTCAGATTGCCAAGGCATTGGAAGG ACACAAACATCTGACTGAAGTTGATATGAGCAGCAATGCACTAAGGAGGGCTGGGGCTAG GGTGCTGGCTCAAACTGTGCTGCAGAAAGATGAGTTTAAATTACTAAATGTTAATGGGAA TTTCATCTCAGAAGAAGGCGTTGACGAGTTGAAAGAGATCTTCAAGAAATCTCCTGAAAT GCTTGCATCCCTGGAAGATAATGACCCGGAAGGAGAAGACGAGGGTGACGAGGAGAAAGA ATCTGGAGATGAGGACGTTGAGGATGAACTAGAATCAAAACTGAAAAACCTGGACGTCAA GCAAGAGGCAAGTGTTGACGCACACGCACCAGATAGCAATTAGAATCCAGTACTTGACGA TTTTTCTGCATGTGGCAGTTTTAGTTTTACCATTTTCTTTATGCTAAGCTGGCCATATTA TGTTCCTCCAGCAAGTGCTTCTAACATATAGTTCCATCAGTAATTTAAATTTGGTGGAAT TGAACTGTTGCCTTAATTGGTCACGTTAGGTCTCTAGTTGAACTATGTAGGGTACGAGAG AGAACTACTTTTTATTTATGTTGAACCTTCTTTTGTGTTATGTAGACTTTAATCTTCTTC TTTTCTTTTAAAATTTCCATGATGCATTTGACTTGTTTTTTTTTATCGGTGAACGAAATA CGTGTGCCGGAATCATCGTGAAGTCCTTGGTCTACTTCCATAATGCATTAGTATTTTTCA CTTTTTCGTCCAAAAGATAATGTGTTTTTATGAAAAAATTGTTACATGAATTCAAAATAA ATAAATAAAGATGTCATAATTTTTCAAAAAAGTAAATAACAAAGTTGATAATAGTAGGCA TTTTAAAGATTTAATTAGGATAGAAGAGGGAGTTTGCTTCTTGTTCAAAGTTGAAAGGCT GTTTAATTTTTAAAGTAAAATTTGATAGGCAATACAATGCCACATTCTGGGTCTGTTAAA TACTGGACAAGAGTACAGCCTTCAAAATAGTGAACTAGCTCGTAACATCAACTTGAAAAT ATGCTGGACATGGCAGCCAAGCTACTGAAACTTAATCCACCATTGACTCCAAATTAGAAT AATTAAGAATTGTAGCAAAAAGCTAATGGTACATCTCCAATTTTTCCACTACTGCACAGT TAACTAGTAGCAAATGCAAAACCTAAAAGGTATTAGATGCTAATATACATGTAAGACACT GAGTCAAACAGACGACTAGAACCATAGTTAGAGATCTTAAATGCTCCCCTATGTCCACTA ATGACTTCACTGGCCAAATTAATTCCTAGGTTTTACAAGGGCAACCTCAGGATATTAAGC TTGATCTCCTCCTCCTGTGGGCCTTCCACGATAAACCGTCCACACTATGGCCAGTCAAAT CGTGATAATCATTTCTCATGGAACTTGCACTCTCGGATTTGAACCTTTTGGGAGTTCTTC CATAGGTATCTTCACTTGTTGCCTCACTCGCCACAGACACAGTATCGGGCTTCAAGTCAT GTCCAGTCCTCTCAGAATCAGCATTGCCACTAGGCAACTCACCATTTGAGACTGACTGAT GGTCCCTGTTCCTGCCTTTACTTGATTGCGTAAAGAAATCATCTCCGTTCTCCACAGCCT TCATCCACTGTACATCACTTAAAGTATCGGCATAAACCACTTCCTTTCTACGTCGCTTTC CAGTGATATTAGCACTTTCGTATAAGAATCCTTTTCCCTTTTCCTTAGAGTCAGGTGTAG CATAAGCCCAATCTGGTACCTCATGATCTTCCATGAGACGAGATCTGTAACGCTCTTTTT GTCTTCTCTCCTCGTCCATTTTCTCAAACAGCCAAAATTCCTCATCGGAGCGGGCAGCAA GACGATTAATCTCTCTTTCGCTTGGCACATCTGTTCCAAGAGTGCTTGTACCTTTACGCA TGATCTCTTCCAACATATCCCTTCTTTCTTGAGCTGCATGAACAAGTAATGTCAAGTTAG ATTTCATTATGAAGAGGATCCAAAATCAAGACAATGGATAGAAACATTAGTCAGCATTCA CAATCTTAACATGCTGAAAATACACAGGTGGAACTTGGTAAAGCGCTTGATGCATGTCAA CAAAAGGTATTAGTACTAACAAGTTGAAAGTACACACGTAAAACATGGTAAATGCAAATT TTTCTTATAATCCAACCTGATTTTTTCGGTCAACCTTCAAAGCAAGTAAAGAACTTGTAC ATAACTATTAGGTAATTTGTTTCCTTTCCCCTAAGAAAATTAAAGAAGGCTTGGGCCTGG AGGTGTGGAGAGTTCTCTAAAACTACATGTGTACATGACAAACCTGTAGATGTTGTATTG AACAAGCCAGCCTGGATGACCTTAGCATCAATACCCATCTTCTGTTTTGCACGCTCCAAA ATGACCTCTTCAATTGATCCAACACTGACCAACACAAAAACCCTAACTTCTTTTTTTTGC CCAATTCGATGTGCCCTATCTTCTGCCTGCTGGTCCATTTGAGGGTTCCAGTCGCTATCA AAAATTATCACAGTATCTGCTGTTTGCAGATTTAGACCGAGTCCTCCAGCACGAGTACTC AAAAGAAACATAAAGTAAGGAGAGTCAGGAGCATTAAATTGCTTTAGCAAAGTCCCTCGC TCCTCTGTTTTGGTTGAGCCATCAAGTCTAAGATACTTGAAGTCATGAACCTGCAGATAG ACTTCAAGAATGTCCATGAGGCGGGTCATTTGTGAGAAGAGAAGGACCCTGTGCCCAGCT CTGCGAAGTTTGGGTAGTAAACGATCAAGAAGCTCAAATTTTCCAGATGCTCTCACTATC TCCTCCTTTCGATAAATATTATACTCGGCCACAAATAGGTAAGGGTGATTACAACATTTC CTAAGTTGCATGGAGAGATTCTGCAGACTCTTAGACCTCCCAGTTCCTGCGAAGTCACAT AGTCAGCAAATAATGATTGCCAAAAGACTCGGGGGAGGGGAGACGAAAAAAGAACACGAG TTATACAAGGAATCATTGAGGATGTAGATTTTAGAGCAATGGATCCCTGAAGGCCCAAGA GGAAGGGGAAAATGGGGGGGAAGGGGTGGGGGAGAAAGAAAGAGTACTATACAGGCAAAG TTGTTTATCCCTCTCTATAAAATGTCCATGACCCCTCCACACACACCCAAAAAGTAGTTC TTAAAGTCAACCATGCATAAAAGGAATGAATTGAAGGCAATACTTTCTTGAGGGCACCTG CTACTCACCAGAATCCAATCCAACCCTCCCAACATCTGTGACCTGCTGGTAGTATACTTT TTGCCATGCAGACATATCACATTTAAGAACAACTTGTGTTTTCCCAGGAAGAAATTTCTC CACTTCATCCTTCTTCCTCCTCAATATAAATGGCCTTATCACCTAAAAGTAGTCAAAAAC ATTAGATAAGGAAAATAGAAAGTGCATTTGTAAAGGTGCAACAAATACTGCACAGGCATG ACAGAAGTGTATATTAGTGATTACTAAAACCAAAACCTACATGGTGCAACCGGCGAATAA TCAATAGTTCCTCTTCATCAGTTAGAGAGACATCACACTTATCGGCGAAGGGGGCATTAA ACCACTCCTCAAAATTCTCCACTGAATTAAAGATGTTTGGAAGAAGAAAATTGAGAAGAG ACCACAACTCCTGTAAGCTGTTTTGGATTGGGGTACCTGTCAATAGGAGTCTTCGTCGAA TCCTATAACTGCAAATATTACACACCTCAATTAGAGAATGCTTCTAGCATCCAATTTTTT TTTCTTGTAAAATTGAACTGCCAAGAATAATGATTTCCAGATTTTGGCATATTCCACAAT TAATTTTTTTTTAAAAAAACAAATTACTCATTCGATTATGTGCTAGTGTGTCAGATTATA CCTTCATCAGCAAAGGTGAGTGCTAAAAATAAGCAGAGAGGAGCAAACCCAAATCTCATA AAATAGGAAGATTTACACCATAGGCTATTATTCCTCCCCTTTTTGATTAACATTCTTATA CATTAGCAACTTGACAAACATAAAATTACATCTCACGTACCCTGACACAAGTGTCCGTGC AAGAGCACATTCGTGATTTTTCAATCTGTGGCCTTCATCAATTATCAGATAGTGCCAATG AATTTTCTTCAGAAATGCTTTGTCTCTCATAATAAGATCATAATGTGTGATCAACACACT GAACCTCCCCTCTCCTGTCAACTCCTCCCTCAGTGCCTTCCTTTCTTCCAAACGACCATC GTAAAGAATAGCAACAATGCTGCAACAAGGAAAAAAGTTCTCACAAGATGTGATGTACAG TGCACATATTAACAAACAAATTCAATGTGTTTGTGCTCCCTGCATGGAAGAGAGAGAGAG AGACTGGTGCATACCTAGGAGCCCATGTTGAGAATTCCGTAATCCAATTAGGTAGTACAG CTTTTGGAGCCACAATCAAGTGGGGACCACGTACACCCTTGTTTTCCAAGAGGTAAGCAA TTAAAGCAATTGTCTGGATCGTTTTCCCGAGTCCCATTTCATCCGCTAAAATTCCATTTA AGTTGTTATTAAACAAAGACAACATCCATTGAAGCCCTTCTATCTGGTAAGATCTCAGTT CTCCACCCTGAAGCATAGCTGGTTGCTCCGTAACCTACAAATATCATTAGATCTGCGGCA TCAATAACACAACAAAGGATGCAGATACTTAATTTCAGTTGTAGGAAAGGGAAAACAGCT AGTATATTGCAATTGCCATGGAGTTAGTTAGTGGAGATTGTATCAGATACAGATCCTTGT ACATCAGCATTAAGCCATTTAGCTGAGATTAGAAACAAACAATGGGCATGAGAACATATT TTGGGACTGGAGAATCGAAATCAAAATTGAATGTACAGTGATATGAAACTAGTACAGATT CCTCGCTTCTAAATATTTTAAAGAAAATCCATCATAAAACCCGAATGGTGGAGCTGGGAT GGAGGTAAAATGGGAAGATTTTAGTTAGCTCAGCTACATGACATAAAGTGGTGTAATGTA AAAAGAACGTCACAACATACTTGATAGTCATCCAATTCTAATAATTTTGGCACCTTGCTA AGGTCTAGTCTTTCCATCAAATTAAAAAGTAAGAACAGAAACTCGAGGGACGAATCAGTT TAACAGAGTATTCTCATTACACGATAGAGCTGCAGAATCTAATTTATTACACTAAATAAC ATTCATGATTACATTAAAGAAGGTTTTTCTTTGTAATAACCAAACACCAGTAACGAGTAA TAAAACGCTGACGAGGTCATCTGAAATAATCGAACACTATGACCCAAACTATTGAAACAC TGCTTTAAAATGAGAAGACACTGTGTCACAATCAATAGGAAACTCAAGCACATTGACCAA AGACATAGGAGAAAGGATGAGAATACAAATCTGAAAACCTCCGGAAGGTCCAGTTTTTGC AATTAACATCCATTCTAAAACTTGGACACAACTCTTCAATAATATCCCTGGGAATTAAAA GTAAAAGATAACAGAGAAGCGGTGTGCCTCTTTACCTTCTCCTGGATCGAATGTACAGCT GAATTGTACTTCCTTTGACCTTCAAGTAAGTCATTAGTCTTCACATCATGAGTGGACTCA TCATCAATTACATCCTCTTCTTCCTCAGGAAGCGACTGCCCAGGAGTATCAGTCTTAGTA GCAGCCATTTCAGCATCTGAACCTTCCAAAGATTCAAGGCCATCATGATCAGCATCTTTC TGCCGTTGAACAGCAGCTCCCAAACGACCCAGGAGGTCATTTGTTTTCCCTAGAAGCATT GTCAACCTTTCGTTCTTGCTTTCCTCCACCATCTTCATGTAAGCTTCTTGATCATCAGCT TTCAGTGCTTGTAACCTCAGTTTCTCAGCACGAGTAGCCCGTTGCCTTTGCCTTCCATGC CAAGCCTACAAAATAGATTGACTTCATTTTAGCCAAGATAAAATCCGGCATATGTCTAAG AGTATAAGAGGTGAAGAATGCATCCACTCTCTAGGTCACAACTCATTATTGGCTCCTGGT ATTTGTCAATTGTTGAACAAATGAATGCACAGTAGAACAAACAGCAGAAAGTAAATAATG TCATACCTGAACACCATCATTCCTCTGTTTCCGCCGCTTCTGAACAGCCTGTACTTGTAA TTGGAGTTCACGTGCTGCATTGAGTACATCCGCAAAGAACTTCCTTTTTGTAGTTTCCAC GCGGTTTCTTTCCTCTTCCTCTATTCTTGACAACCTCTGCAAAATTTTGTTGTTATTACC AACAGGCTTCTGACATCAAATTCTGTAAATTTTGCATTCAAAAGTTTCCCATCAAGGAGT CAAAAGAATGGAGGACAGTGCCTGATTCTTAAAATCTAAATTCTCAGCAAAGCTCTCTTC TCAACTTAACCAATAGATAGAAGACATGACTAAGACTATTTTTTACCTAATTACATCAAG ATGAAATTTCATTTCTGAAATTGGGAGGAGAAAGAAAGAATCAGAACCCGTTGTGCTTAA AAACATTAACTTGACAGATGTAGATATAATAGCACAATTGACAAAGGCTCCGAGGCATCT ATCACTTTACCTGCGCATCACGCTTCTTCCTCAATGGATCATCAGATTCAACAGCAAAGG CATCTCCTATACCATATACAGGGCGTCGCAATCGTGTCATCCCCCAGTCAAACAATTGCT TGTCAGGATTAGCGCAATGCAGGCGAAGCCAATATTCAGAACTCACTTCAGACCGAACTT TTTGTTGTAAATCTGCTAACTGCAAAGTATAAATAATGATGAGAAGACAATCCATATCCA GCCACCTACACCACTTCTACAACAAAAAATTAGAAGCTTAAATAGGTGGTGGTTAGACTA TGCACAGGTGCAGATGATGAAGAAGATATAGACTACTCTCAGGGTAACTACAATGGAGAT GGAATGGTTTCCCAATAGATGGTATCTTTAGTTCAACTCGTTGAGCTACGACGATTTGAT