Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g079670.2.1
CDS Infomation

LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1)
Sequence

ATGCAAGAAAAGTTGAGAATGCATAGGAATAGATCGATGGTAGCTCGTAGAGCTTGGAAT
GTTGTCCGATTAGCCTTGTTATGGGCGAGAAAAGGTGGCATTTTCAAGTACAAACATCTC
CGTTTGCTTCCTAAATATATTAAAAGTCTCCGTTATACCAATGATAATGATCACTCACCA
TATTATGGTGAGCGTGAGTTTTCGTTTGATGATACACCTACTATTCATGTTAAAATGCAT
CGTCCTGCTTCCTTGCGTTTCAAGATGCCAAACATCCCCTGCATCAAACCTCAAGTCGAT
TCTGACTTTGAACACGATGATGAAATGAACAATGATGCTCCTAAGAAGAGCTTCTTGAAT
ACTCAGAATGAGAACTGTGATGAAGCTATTGATATGAAGGCAGAAGAGTTTATTGCAAAG
TTCTATGAGCAAATAAAACTTCAAAGACAAATATCATATTTACAGTAA

Peptide Sequence

PEP ID

Solyc01g079670.2.1
PEP Infomation

LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1)
Sequence

MQEKLRMHRNRSMVARRAWNVVRLALLWARKGGIFKYKHLRLLPKYIKSLRYTNDNDHSP
YYGEREFSFDDTPTIHVKMHRPASLRFKMPNIPCIKPQVDSDFEHDDEMNNDAPKKSFLN
TQNENCDEAIDMKAEEFIAKFYEQIKLQRQISYLQ*

Transcript Sequence

Transcript ID

Solyc01g079670.2.1
Transcript Infomation

LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1)
Sequence

CATATATATATAGCTTTCTCCTTCTACTCAATACACACAACATAAAGAAGCAAAGAAACA
ACTTGAAAAAGCATATTTACTTTCTCTCAATTTTCAATATTTGACATGCAAGAAAAGTTG
AGAATGCATAGGAATAGATCGATGGTAGCTCGTAGAGCTTGGAATGTTGTCCGATTAGCC
TTGTTATGGGCGAGAAAAGGTGGCATTTTCAAGTACAAACATCTCCGTTTGCTTCCTAAA
TATATTAAAAGTCTCCGTTATACCAATGATAATGATCACTCACCATATTATGGTGAGCGT
GAGTTTTCGTTTGATGATACACCTACTATTCATGTTAAAATGCATCGTCCTGCTTCCTTG
CGTTTCAAGATGCCAAACATCCCCTGCATCAAACCTCAAGTCGATTCTGACTTTGAACAC
GATGATGAAATGAACAATGATGCTCCTAAGAAGAGCTTCTTGAATACTCAGAATGAGAAC
TGTGATGAAGCTATTGATATGAAGGCAGAAGAGTTTATTGCAAAGTTCTATGAGCAAATA
AAACTTCAAAGACAAATATCATATTTACAGTAATTAAATACTACATGCAAACCTTCAATT
TCATATTTTCTTTGTTTAAATTACATAGCACTAGTTTGTTGTACATAGAAGAGGTACTCC
ATCTATCCATTTCACATTAATGGT