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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g079660.2.1
CDS Infomation

LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1)
Sequence

ATGCAAGAAAAGTCGAAAATGCAGAGGAAGAGATCATTGGTTGCTCGTAGAGCTTGGAAT
GTTCTCCGACTAGCCTTGTTATGGGCGAGAAAAGGTGGCATTTTCAAGAACAAACACCTT
GTGGATCTCCGTTTGCTTCCTAAATATTTTAAAAGTCTTCGTCATACCAATGATCACTAT
GGGACACTGCATTATGGGGAGCGTGAGTTTTCCTTTGATGACACCCCTGTCTTTCATGTT
AAGATGCATCGTCCTGCTTCCTTGCGTTTCAAGATGCCTAACATTCCCTGCATTAAACCT
CAAGTCGACTTTGACTTTGACTTTGAGCGCGAGGATGAAATGTACAATGATAACAATAAT
AATAATAATGATGACGACGCTCCTTGGAAGAGCTTCTTGACGACTGAATGTCAAGAGGAT
GAGTATATGTATGAGGAGATCGTTGCTAGTGGCGATGATGAAGCTATTGATAGGAAGGCA
GATGAGTTCATTGCGAAGTTCTATCAGCAAATGAAGCTGCAAAAACAATTGTCGTATCTA
CAATACCATGAAAAGCTCGCTAATTAA

Peptide Sequence

PEP ID

Solyc01g079660.2.1
PEP Infomation

LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1)
Sequence

MQEKSKMQRKRSLVARRAWNVLRLALLWARKGGIFKNKHLVDLRLLPKYFKSLRHTNDHY
GTLHYGEREFSFDDTPVFHVKMHRPASLRFKMPNIPCIKPQVDFDFDFEREDEMYNDNNN
NNNDDDAPWKSFLTTECQEDEYMYEEIVASGDDEAIDRKADEFIAKFYQQMKLQKQLSYL
QYHEKLAN*

Transcript Sequence

Transcript ID

Solyc01g079660.2.1
Transcript Infomation

LOW QUALITY:cotton fiber protein (AHRD V3.3 *** AT5G38700.1)
Sequence

CTACATCAAAAAAAAGCTCATAAACATTGAACAAAAAGCAAAAGAGATTATCCAAAAGAC
AAAAGTGCATACACTTTCTCTTTTCTTTTTCAAGTTTGTTATCTTCTACGCTTTTTAAAC
TACAAGCTGCAAAGATGCAAGAAAAGTCGAAAATGCAGAGGAAGAGATCATTGGTTGCTC
GTAGAGCTTGGAATGTTCTCCGACTAGCCTTGTTATGGGCGAGAAAAGGTGGCATTTTCA
AGAACAAACACCTTGTGGATCTCCGTTTGCTTCCTAAATATTTTAAAAGTCTTCGTCATA
CCAATGATCACTATGGGACACTGCATTATGGGGAGCGTGAGTTTTCCTTTGATGACACCC
CTGTCTTTCATGTTAAGATGCATCGTCCTGCTTCCTTGCGTTTCAAGATGCCTAACATTC
CCTGCATTAAACCTCAAGTCGACTTTGACTTTGACTTTGAGCGCGAGGATGAAATGTACA
ATGATAACAATAATAATAATAATGATGACGACGCTCCTTGGAAGAGCTTCTTGACGACTG
AATGTCAAGAGGATGAGTATATGTATGAGGAGATCGTTGCTAGTGGCGATGATGAAGCTA
TTGATAGGAAGGCAGATGAGTTCATTGCGAAGTTCTATCAGCAAATGAAGCTGCAAAAAC
AATTGTCGTATCTACAATACCATGAAAAGCTCGCTAATTAATGGAGGAGAGAGCTGCAGA
CGTTCATTATTTCTTGTATCCAAACCTTGCATTTGTATTCTCTCTGTATAGGACATTTTT
GTAGATAGATGAGGTATTCCATTCAAAAAATGCAAAATAAAAATGTATCAAAGTTCGAGC
TGATATTTATTTGGATTATTTTTCTTGGTTTCTGATTCAATTTTGAAGTTTGTTGAGTGA
ACATTGTATTTCTTATAAGAAGGTTCGTTCAAACTAT