Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g079580.3.1
CDS Infomation

DNAJ heat shock N-terminal domain-containing family protein (AHRD V3.3 *** B9GSH4_POPTR)
Sequence

ATGGTTGATCATTATACATCAACCATGGCTGCCTCTCCTAATTCTTCTATTTCTTGTTCT
GAAAAGAAACATTGGTGGATTAGCAATCGAAAGATTGTTGATAAATATATTAAAGATGCG
AAATTTCTCATTGCTACTCAAGAACCCAACGAGATTGCTTCTGCTGTTAATCTTCTCGAT
GCTGCTCTTGCTCTGTTACCTCGTTTTGAGTTAGCCCTTGAGTTAAAAGCTCGATCTTTA
CTCTATCTCCGGCGATTCAAAGACGTCGCCGATATGCTACAAGACTACATTCCCAGTCTG
AAAATGCCCGTCGATGAGACATCATCGTCGTCGACTTCGTCATCTGGGTCGTCGGATAAC
TCATCCACACAGTTCTCGAGAGAGAAAATGAAGCTACTTTCGTCTGGTAGTGGGTCACCG
GGTCGTGATGAACCCGGGTTCAAGTGCTTTTCCGTTTCCGATTTGAAGAAGAAAGTTATG
GCCGGAATCTACAAGAACTGTGATAAAGAAGGGAAATGGAGGTACTTGGTTCTTGGTCAG
GCTTGTTGCCATTTGGGTCTAATGGAAGACGCAATGGTACTCTTACAGACCGGTAAACGC
ATTGCTACGGATGCATTCCGTCGCGAAAGCATTTGCTGGTCGGATGATAGTTTTTCATTT
GCTAAATTTCCAATCTCCGGTGAACCGGGCATTGCAAATAGCCAGCCTCCGACGCCTCCT
AAAACGGAGTCGGAGAGCATTTCTCAACTACTCAGCCATATCAAGCTCTTGCTTCGTCGA
AAGACAGCTGCCATTGCAGCTCTTGATGCAGGTCTTTATTCAGAAGCTATAAGACATTTT
TCTAAAATTGTGGATGGTCGTCGTGGGGCTCCACAAGGGTTTTTGGCTGAATGTTACGTG
CATAGGGCTTCAGCATATCGATCTTCTGGTCGAATTGCTGAGGCGATTGCTGATTGTAAT
CGAACATTAGCATTAGACCCTTCTTGCATCGATGCTCTTAGGACTAGAGCTGCTTTGTTT
GAAGCTATTCGATGCTTGCCCGACAGTCTTCACGATCTTGAACATTTGAAACTGTTGTAT
AATTCAATTCTACGGGATAGGAAATTACCTGGACCTGTATGGAAGCGTCAATGTGTACAA
TACAGGGAGATTCCCGGGAGGCTTTGTTCTTTGGGTGCCAAAATGCAAGAACTGAAGCAG
AGAGTTGCTTCTGGTGAAATGATGAATGTAGATAACTACGCGTTGATTGGTTTGAGACGG
GGTTGTTCAAGATCTGAATTGGAAAGAGCACATCTTTTGCTCACTTTAAGACACAAGCCT
GATAAATCAACAAGTTTTGTGGAAAGGTGTGAGTTTGCGGATGAGAAGGATGTTGATTCT
ATAAGGGATCGCGCAAAATTGTCTGCCTTGCTATTGTATCGATTGATCCAGAAAGGTTAT
ACAAAGTTAATGACAACAATCATCGATGAAGAAGCTGCTGAGAAACAGAGAACTAAGGCA
GCAGCTGCACTACAAGCAATGCAGCAGCAGCAACAACAAGTTCAGCAAACTCAAGAACTA
CAACAATCTCGAGCTGAACCAATCAGAAATGCGGCATCACGGAGAGCAGTAGAGGCTTCT
GCTTCGTTGAATACTACATCAAGAGTACCTCCAAAGGCTGCTGCTAATACTACATCATCA
TGTAACAACAGCAGGGCAGAAAGCAAAGTGGTGGTATCAACCTCAACAAATGCATCTTCA
TTTCAAGGTGTGTTCTGTAGAGACCTTGCAATTGTTGGAAATCTCTTGTCTCAAGCAGGA
ACCGGGTTTAATCGCCCTATTCCTATGAAATATGAGGCACTGAGCTGCTAA

Peptide Sequence

PEP ID

Solyc01g079580.3.1
PEP Infomation

DNAJ heat shock N-terminal domain-containing family protein (AHRD V3.3 *** B9GSH4_POPTR)
Sequence

MVDHYTSTMAASPNSSISCSEKKHWWISNRKIVDKYIKDAKFLIATQEPNEIASAVNLLD
AALALLPRFELALELKARSLLYLRRFKDVADMLQDYIPSLKMPVDETSSSSTSSSGSSDN
SSTQFSREKMKLLSSGSGSPGRDEPGFKCFSVSDLKKKVMAGIYKNCDKEGKWRYLVLGQ
ACCHLGLMEDAMVLLQTGKRIATDAFRRESICWSDDSFSFAKFPISGEPGIANSQPPTPP
KTESESISQLLSHIKLLLRRKTAAIAALDAGLYSEAIRHFSKIVDGRRGAPQGFLAECYV
HRASAYRSSGRIAEAIADCNRTLALDPSCIDALRTRAALFEAIRCLPDSLHDLEHLKLLY
NSILRDRKLPGPVWKRQCVQYREIPGRLCSLGAKMQELKQRVASGEMMNVDNYALIGLRR
GCSRSELERAHLLLTLRHKPDKSTSFVERCEFADEKDVDSIRDRAKLSALLLYRLIQKGY
TKLMTTIIDEEAAEKQRTKAAAALQAMQQQQQQVQQTQELQQSRAEPIRNAASRRAVEAS
ASLNTTSRVPPKAAANTTSSCNNSRAESKVVVSTSTNASSFQGVFCRDLAIVGNLLSQAG
TGFNRPIPMKYEALSC*

Transcript Sequence

Transcript ID

Solyc01g079580.3.1
Transcript Infomation

DNAJ heat shock N-terminal domain-containing family protein (AHRD V3.3 *** B9GSH4_POPTR)
Sequence

CACTCCATTCCCTCTCTCTCCCCCTTCACTTCTCTCTCTTCAAAATTCGAAGAGGAAAAA
TAAATGAGTATTTGAGAAGCTTTCTCAAAACCCCAACAAGTGAAGCATTTTAATGGTTGA
TCATTATACATCAACCATGGCTGCCTCTCCTAATTCTTCTATTTCTTGTTCTGAAAAGAA
ACATTGGTGGATTAGCAATCGAAAGATTGTTGATAAATATATTAAAGATGCGAAATTTCT
CATTGCTACTCAAGAACCCAACGAGATTGCTTCTGCTGTTAATCTTCTCGATGCTGCTCT
TGCTCTGTTACCTCGTTTTGAGTTAGCCCTTGAGTTAAAAGCTCGATCTTTACTCTATCT
CCGGCGATTCAAAGACGTCGCCGATATGCTACAAGACTACATTCCCAGTCTGAAAATGCC
CGTCGATGAGACATCATCGTCGTCGACTTCGTCATCTGGGTCGTCGGATAACTCATCCAC
ACAGTTCTCGAGAGAGAAAATGAAGCTACTTTCGTCTGGTAGTGGGTCACCGGGTCGTGA
TGAACCCGGGTTCAAGTGCTTTTCCGTTTCCGATTTGAAGAAGAAAGTTATGGCCGGAAT
CTACAAGAACTGTGATAAAGAAGGGAAATGGAGGTACTTGGTTCTTGGTCAGGCTTGTTG
CCATTTGGGTCTAATGGAAGACGCAATGGTACTCTTACAGACCGGTAAACGCATTGCTAC
GGATGCATTCCGTCGCGAAAGCATTTGCTGGTCGGATGATAGTTTTTCATTTGCTAAATT
TCCAATCTCCGGTGAACCGGGCATTGCAAATAGCCAGCCTCCGACGCCTCCTAAAACGGA
GTCGGAGAGCATTTCTCAACTACTCAGCCATATCAAGCTCTTGCTTCGTCGAAAGACAGC
TGCCATTGCAGCTCTTGATGCAGGTCTTTATTCAGAAGCTATAAGACATTTTTCTAAAAT
TGTGGATGGTCGTCGTGGGGCTCCACAAGGGTTTTTGGCTGAATGTTACGTGCATAGGGC
TTCAGCATATCGATCTTCTGGTCGAATTGCTGAGGCGATTGCTGATTGTAATCGAACATT
AGCATTAGACCCTTCTTGCATCGATGCTCTTAGGACTAGAGCTGCTTTGTTTGAAGCTAT
TCGATGCTTGCCCGACAGTCTTCACGATCTTGAACATTTGAAACTGTTGTATAATTCAAT
TCTACGGGATAGGAAATTACCTGGACCTGTATGGAAGCGTCAATGTGTACAATACAGGGA
GATTCCCGGGAGGCTTTGTTCTTTGGGTGCCAAAATGCAAGAACTGAAGCAGAGAGTTGC
TTCTGGTGAAATGATGAATGTAGATAACTACGCGTTGATTGGTTTGAGACGGGGTTGTTC
AAGATCTGAATTGGAAAGAGCACATCTTTTGCTCACTTTAAGACACAAGCCTGATAAATC
AACAAGTTTTGTGGAAAGGTGTGAGTTTGCGGATGAGAAGGATGTTGATTCTATAAGGGA
TCGCGCAAAATTGTCTGCCTTGCTATTGTATCGATTGATCCAGAAAGGTTATACAAAGTT
AATGACAACAATCATCGATGAAGAAGCTGCTGAGAAACAGAGAACTAAGGCAGCAGCTGC
ACTACAAGCAATGCAGCAGCAGCAACAACAAGTTCAGCAAACTCAAGAACTACAACAATC
TCGAGCTGAACCAATCAGAAATGCGGCATCACGGAGAGCAGTAGAGGCTTCTGCTTCGTT
GAATACTACATCAAGAGTACCTCCAAAGGCTGCTGCTAATACTACATCATCATGTAACAA
CAGCAGGGCAGAAAGCAAAGTGGTGGTATCAACCTCAACAAATGCATCTTCATTTCAAGG
TGTGTTCTGTAGAGACCTTGCAATTGTTGGAAATCTCTTGTCTCAAGCAGGAACCGGGTT
TAATCGCCCTATTCCTATGAAATATGAGGCACTGAGCTGCTAATTCATCGAAGAAAACCC
GACGAAGAACAACTATTTAATTAGCTTGGACAATGTTTATACTATCGGAGTGCAGATGAA
AATCCTAATTTGGTACCAATATCTTTGTACAAAGGGCAAGAAAAAAAATGAAATTACTAT
TTGCAGCCAGAAAAAATTTTGCTACTTTTATTTTTGTTTTTCTTTTGTTGTGCACTACAT
GTAATGTACATATAGTTAAATTCAGCACCTAAATTATCTACCAGTATTTCTTTTTGTTAT
TATTACATTGTTTTCTTTGTCCTATTACTTTCACCTTGTCCTTTGTTCATTTAGATTTGA
ATGGAAGCCAAATGAAATGTTGAACAAGTAGAGCAAAATTTGGCTTCCATAA