Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g079570.3.1
CDS Infomation	Beta-D-xylosidase family protein (AHRD V3.3 *** B9HWX2_POPTR)
Sequence	ATGAGTGGAGGTAACAGCATTACCAAATCAACCTCCAGTCTCTTCATTTTCATTTTCCTG TTTGTTTCTATTCAAGCAGCTCGTCCCCCATTCGCCTGTGACCAAAAAAACAGAGCATTT AGAAATTTCCCCTTTTGTCAAACAAATTTGCCGATTGGCGACAGAGTGAGAGATCTGATT GGGCGATTAACATTACAAGAGAAAGTGAAATTGTTGGGGAACAATGCCGCGGCAGTGCCG AGGCTGGGTATAAAAGGATACGAGTGGTGGTCGGAGGCACTTCACGGAGTTTCAAATGTA GGTCCAGGGACTAAATTTGGGGGTGAATTTCCAGGAGCTACTAGTTTTCCACAAGTTATT ACTACTGCTGCTTCTTTCAATGCTTCATTGTGGGAAGAAATTGGCCGGGTTGTATCAGAT GAAGCACGAGCAATGTACAATGGAGAAATGGGAGGTCTGACATATTGGAGCCCAAACGTC AACATTTTTCGAGATCCAAGGTGGGGAAGAGGACAGGAGACTCCCGGTGAAGATCCCGTC GTAGCTGCTCTATACGCCGAGCGTTATGTAAGAGGTTTACAAGGAAATGAAGATGGTGAC AGCCTGAAAGTAGCAGCATGTTGCAAGCATTATACGGCCTATGACCTCGATAACTGGGGT GGCGTTGATAGATTTCACTTTAACGCCAAGGTTACCAAGCAAGATATTGAAGATACATTT GATGTACCATTTAGAAGTTGTGTTAAACAAGGTAAAGTGGCTAGTATTATGTGTTCATAC AATCAAGTCAATGGCATACCAACTTGTGCTGATCCTCAACTTCTACGTAAAACAATACGC GGTGGTTGGGGTCTGAACGGTTACATTGTCTCCGATTGTGATTCCGTTGGAGTATTCTAC GATACCCAACATTACACATCAACGCCTGAGGAAGCTGCAGCTGCTGCTATTAAAGCGGGT CTGGATTTGGATTGTGGGCCTTTTTTGTCACAACATACTGAGAATGCGGTGCATATTGGT ATTCTTAAAGAAGCTGCTATTGATACAAATTTAGCTAATACTGTTGCTGTTCAAATGAGG CTTGGGATGTTTGATGGAGAACCATCAGCCCAGCAATACGGACATCTTGGCCCAAGAGAT GTTTGCAGCCCCGCCCATCAAGAACTCGCCGTTGAAGCTGCTAGACAGGGTATTGTTCTT CTTAAGAATCATGGACCGGCTCTTCCTCTTTCACCTCGACGCCATCGTACTGTTGCTGTT ATTGGACCAAATTCAGATGTTACTGTCACAATGATCGGAAACTACGCAGGCGTTGCATGT GGATACACGAGCCCATTACAAGGAATATCAAAGTATGCAAAGACCATTCATGAAAAAGGT TGTGGTGATGTGGCATGTTCAGACGATAAATTATTTGCTGGAGCTGTAAATGCTGCACGT CAAGCAGATGCAACAGTGCTAGTGATGGGCCTAGACCAGTCTATTGAGGCTGAATTCAGA GATAGAACTGGACTGCTTTTGCCTGGATTCCAACAAGAACTCATCTCCGAGGTATCGAAG GCATCGAGAGGTCCTGTAGTATTGGTCCTCATGTCTGGAGGCCCAGTTGATGTAACATTT GCCAATAACGATCCTCGAATTGGTGCTATTGTGTGGGCTGGATATCCTGGACAAGGTGGC GGTGCTGCCATTGCAGATGTCCTTTTTGGAGCCCATAATCCAGGTGGGAAGTTACCAATG ACATGGTATCCACAAGAGTACTTAAACAATTTACCAATGACAACAATGGACATGCGATCA AATTTAGCCAAAGGATACCCTGGTAGAACATACCGTTTTTACAAAGGCCCATTAGTATAC CCATTTGGGCACGGATTAAGCTACACAAAATTCATCACTACAATCTTCGAAGCCCCAAAG ACACTAGCCATTCCAATAGACGGACGCCATACTTACAACAGCAGTACCATATCAAACAAA TCAATCCGAGTAACACACGCAAAATGCAGCAAGATATCAGTTCAGATTCATGTCGACGTG AAGAATGTAGGGCCAAAGGATGGTTCACACACATTGCTCGTATTTTCAAAGCCACCTGTT GATATTTGGGTGCCACATAAACAATTGGTCGCGTTTCAAAAGGTATACGTCCCAGCAAGA TCGAAGCAACGTGTTGCGATAAATATTCATGTGTGCAAGTATTTAAGTGTAGTAGATAGA GCTGGTGTTCGAAGAATTCCAATTGGTGAACATAGCATTCACATTGGTGATGCTAAGCAT TCCTTATCACTTCAAGCATCAGTTCTTGGAGTTATTAAATCTTAA

Peptide Sequence

PEP ID	Solyc01g079570.3.1
PEP Infomation	Beta-D-xylosidase family protein (AHRD V3.3 *** B9HWX2_POPTR)
Sequence	MSGGNSITKSTSSLFIFIFLFVSIQAARPPFACDQKNRAFRNFPFCQTNLPIGDRVRDLI GRLTLQEKVKLLGNNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGEFPGATSFPQVI TTAASFNASLWEEIGRVVSDEARAMYNGEMGGLTYWSPNVNIFRDPRWGRGQETPGEDPV VAALYAERYVRGLQGNEDGDSLKVAACCKHYTAYDLDNWGGVDRFHFNAKVTKQDIEDTF DVPFRSCVKQGKVASIMCSYNQVNGIPTCADPQLLRKTIRGGWGLNGYIVSDCDSVGVFY DTQHYTSTPEEAAAAAIKAGLDLDCGPFLSQHTENAVHIGILKEAAIDTNLANTVAVQMR LGMFDGEPSAQQYGHLGPRDVCSPAHQELAVEAARQGIVLLKNHGPALPLSPRRHRTVAV IGPNSDVTVTMIGNYAGVACGYTSPLQGISKYAKTIHEKGCGDVACSDDKLFAGAVNAAR QADATVLVMGLDQSIEAEFRDRTGLLLPGFQQELISEVSKASRGPVVLVLMSGGPVDVTF ANNDPRIGAIVWAGYPGQGGGAAIADVLFGAHNPGGKLPMTWYPQEYLNNLPMTTMDMRS NLAKGYPGRTYRFYKGPLVYPFGHGLSYTKFITTIFEAPKTLAIPIDGRHTYNSSTISNK SIRVTHAKCSKISVQIHVDVKNVGPKDGSHTLLVFSKPPVDIWVPHKQLVAFQKVYVPAR SKQRVAINIHVCKYLSVVDRAGVRRIPIGEHSIHIGDAKHSLSLQASVLGVIKS*

Transcript Sequence

Transcript ID	Solyc01g079570.3.1
Transcript Infomation	Beta-D-xylosidase family protein (AHRD V3.3 *** B9HWX2_POPTR)
Sequence	ACAAAATTTAAATATGTAACTGATAATTTCATCGTGAGTCCGTGAAATTTTATATACGTT ATCCCAATTTAAAACATGCAAAAGATGCATCACCAATGCCCATATCCTCATGCATCATAA CCACTAGCTCTTTAAGGCCAATACCCATGGCCTCAACAAACCAAAAAAACTCAAATCTTA TATAAACCTACATCCAAAGCAACCACTCACACAATTGAAACAACAAATATTCCCTCTTCC CCACAAAAATGAGTGGAGGTAACAGCATTACCAAATCAACCTCCAGTCTCTTCATTTTCA TTTTCCTGTTTGTTTCTATTCAAGCAGCTCGTCCCCCATTCGCCTGTGACCAAAAAAACA GAGCATTTAGAAATTTCCCCTTTTGTCAAACAAATTTGCCGATTGGCGACAGAGTGAGAG ATCTGATTGGGCGATTAACATTACAAGAGAAAGTGAAATTGTTGGGGAACAATGCCGCGG CAGTGCCGAGGCTGGGTATAAAAGGATACGAGTGGTGGTCGGAGGCACTTCACGGAGTTT CAAATGTAGGTCCAGGGACTAAATTTGGGGGTGAATTTCCAGGAGCTACTAGTTTTCCAC AAGTTATTACTACTGCTGCTTCTTTCAATGCTTCATTGTGGGAAGAAATTGGCCGGGTTG TATCAGATGAAGCACGAGCAATGTACAATGGAGAAATGGGAGGTCTGACATATTGGAGCC CAAACGTCAACATTTTTCGAGATCCAAGGTGGGGAAGAGGACAGGAGACTCCCGGTGAAG ATCCCGTCGTAGCTGCTCTATACGCCGAGCGTTATGTAAGAGGTTTACAAGGAAATGAAG ATGGTGACAGCCTGAAAGTAGCAGCATGTTGCAAGCATTATACGGCCTATGACCTCGATA ACTGGGGTGGCGTTGATAGATTTCACTTTAACGCCAAGGTTACCAAGCAAGATATTGAAG ATACATTTGATGTACCATTTAGAAGTTGTGTTAAACAAGGTAAAGTGGCTAGTATTATGT GTTCATACAATCAAGTCAATGGCATACCAACTTGTGCTGATCCTCAACTTCTACGTAAAA CAATACGCGGTGGTTGGGGTCTGAACGGTTACATTGTCTCCGATTGTGATTCCGTTGGAG TATTCTACGATACCCAACATTACACATCAACGCCTGAGGAAGCTGCAGCTGCTGCTATTA AAGCGGGTCTGGATTTGGATTGTGGGCCTTTTTTGTCACAACATACTGAGAATGCGGTGC ATATTGGTATTCTTAAAGAAGCTGCTATTGATACAAATTTAGCTAATACTGTTGCTGTTC AAATGAGGCTTGGGATGTTTGATGGAGAACCATCAGCCCAGCAATACGGACATCTTGGCC CAAGAGATGTTTGCAGCCCCGCCCATCAAGAACTCGCCGTTGAAGCTGCTAGACAGGGTA TTGTTCTTCTTAAGAATCATGGACCGGCTCTTCCTCTTTCACCTCGACGCCATCGTACTG TTGCTGTTATTGGACCAAATTCAGATGTTACTGTCACAATGATCGGAAACTACGCAGGCG TTGCATGTGGATACACGAGCCCATTACAAGGAATATCAAAGTATGCAAAGACCATTCATG AAAAAGGTTGTGGTGATGTGGCATGTTCAGACGATAAATTATTTGCTGGAGCTGTAAATG CTGCACGTCAAGCAGATGCAACAGTGCTAGTGATGGGCCTAGACCAGTCTATTGAGGCTG AATTCAGAGATAGAACTGGACTGCTTTTGCCTGGATTCCAACAAGAACTCATCTCCGAGG TATCGAAGGCATCGAGAGGTCCTGTAGTATTGGTCCTCATGTCTGGAGGCCCAGTTGATG TAACATTTGCCAATAACGATCCTCGAATTGGTGCTATTGTGTGGGCTGGATATCCTGGAC AAGGTGGCGGTGCTGCCATTGCAGATGTCCTTTTTGGAGCCCATAATCCAGGTGGGAAGT TACCAATGACATGGTATCCACAAGAGTACTTAAACAATTTACCAATGACAACAATGGACA TGCGATCAAATTTAGCCAAAGGATACCCTGGTAGAACATACCGTTTTTACAAAGGCCCAT TAGTATACCCATTTGGGCACGGATTAAGCTACACAAAATTCATCACTACAATCTTCGAAG CCCCAAAGACACTAGCCATTCCAATAGACGGACGCCATACTTACAACAGCAGTACCATAT CAAACAAATCAATCCGAGTAACACACGCAAAATGCAGCAAGATATCAGTTCAGATTCATG TCGACGTGAAGAATGTAGGGCCAAAGGATGGTTCACACACATTGCTCGTATTTTCAAAGC CACCTGTTGATATTTGGGTGCCACATAAACAATTGGTCGCGTTTCAAAAGGTATACGTCC CAGCAAGATCGAAGCAACGTGTTGCGATAAATATTCATGTGTGCAAGTATTTAAGTGTAG TAGATAGAGCTGGTGTTCGAAGAATTCCAATTGGTGAACATAGCATTCACATTGGTGATG CTAAGCATTCCTTATCACTTCAAGCATCAGTTCTTGGAGTTATTAAATCTTAAGGATTTA TTTTCTTTTTTTTTGGGTAAAATCTCCACGTAAAGATGTCTTTGCGTTAAATGGAGATTC TTTTTTTCCCCTAATTGTTCAACAAGGGGATAAGCAAAAATTAGATTTTCTTTTATTAGA TAAGAAGAAAGAAGATTGAGAAATTAATTGTAACTTCCAATTGAAAGAAATGGGGATTAT CTATTACAATGTTTTTTCCAACATTTACATTTTGATATTGTCGTAAATGGGGTATC