Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g079330.3.1
CDS Infomation	RNA helicase DEAD3
Sequence	ATGTCGAAGAGAAAATTTGGATTCGAAGGATTTGGCATTAATCGGCAAACAACGTACAAC TTCGAGCGAAATCAAGCTCCTCAGCGACTGTATGTTCCGCCATCCTCACGTTCTGGAGGT AGCCATGACAATTACGAAGATACCGACTTAGATAACATTGAGTACGATGAACACGACGCT GTCGGAGGGAACAACAATGATGGAGGCGGAGGAGGTGGTGAAGATGATGAAATTGATCCA CTTGATGCGTTTATGGAAGGGATTCATCAAGAAATGAAGGCTGCACCGCCTCCTAAGCCA AAAGAGAAGTTGGATAAGTATAAAGATGATGTAGATGATGATCCGATGGAGAGTTTTCTG AGAGCGAAGAAGGATGTAGGTTTACAATTGGCGGCTGATGCTCTTCACGCTGGTTATAAT TCCGACGAGGAGGTGTATGCAGCAGCAAAGGCTGTTGATGCAGGATTAGTTGAGTATGAC TCCGACGATAATCCTATTGTTGTTGATAAAAAGAAGATTGAGCCGATTACTGCTCTGGAT CATAGTGAGATTGACTATGAGCCTTTCAACAAGGATTTTTACGAGGAAAAGCCTTCTATT TCAGGTATGAGCGATCAGGAAGTTAATGAATATAGGACAGGCTTGGCCATTCGTGTATCA GGCTTTGATGTACCAAGGCCAATTAAGACATTTGAAGACACTGGTTTTTCTGCTGAGTTG ATGAAAGCTATCAGTAAACAGGGATATGAAAGGCCTACGCCAATACAGTGTCAAGCATTA CCAATTGTGCTCTCTGGGAGAGATATTATTGGTATTGCTAAAACTGGGTCCGGTAAGACT GCTGCCTTTGTGCTTCCTATGATTGTCCACATCATGGATCAGCCTGAACTTCAGAAAGAA GAAGGCCCCATTGGAGTTATTTGTGCACCCACTAGGGAATTAGCACATCAAATATTTGTG GAGGCAAAGAAATTCTCGAAATCGCATGGTATCCGTGTGTCTGCAGTTTATGGAGGAATG TCTAAATTGGATCAATACAAAGAACTAAAGGCTGGGTGTGAGATTGTTGTTGCTACTCCA GGGAGGTTGATAGATATGATCAGAAAGAAGGCATTTACAATGTTGAGAGCAACTTATCTA GTGCTTGATGAGGCAGATCGGATGTTTGACCTTGGTTTTGAGCCTCAAATAAGGTCCATT GTTGGTCAAATTAGACCTGATCGCCAAACATTGCTCTTTTCAGCAACTATGCCCCGCAAA GTTGAGAAGCTTGCCAGAGAAATATTGACGGATCCTGTAAGGGTTACTGTGGGTGAGATT GGCACGGCTAATGAGGATATTACACAAATAGTTGAAGTGATTCCTTCGGATGCTGAAAAA TTGCCTTGGCTTCTGGAGAAGCTCCCTGGACTGATTGACAATGGTGATGTTCTTGTCTTT GCTTCGAAAAAGGCAACAGTGGATGAGATTGAATCTCAATTGGCTCAGAAGGGATTTAGA GTTGCAGCTCTCCATGGTGACAAGGATCAAGTTTCTCGTACGGAGACGCTGCAAAAATTT AAATCTGGCATATATCATGTTCTCATTGCAACTGATGTTGCTGCTCGTGGTCTTGACATC AAATCACTTAAGTCAGTGGTGAACTATGATATAGCTAAAGATATGGACATGCATGTTCAC AGAATTGGTAGAACAGGTCGTGCTGGTGACAAGGATGGAACGGCCTTCACTCTTATTACT CATAAGGAAGCACGTTTTGCTGGTGAACTGGCGAACAGTTTGGTTGCTGCTGGTCAAACT GTGTCTGTGGAACTAATGGACCTTGCTATGAAGGACGGAAGGTTTCGGTCCAAAAGGGAT GCAAGGAAAGGAGGTGGAAAAAGGGCCAAAGGAAGGGGAGGAGGAAACAACAAAGGTGTA CGAGGTGTGGATTTTGGTCTAGGGATTGGATACAATCCTGAATCAAATAACCCTCTCCAG AGCGCTGCTCCAAGCCGTTCTGCAGCTGTTAATTCCCTGAGGACAGGCATGATGTCACAA TTTAAAAGTAGCTTTGTTGCTGCATCATCAAATTCTCAAAATCAAGGGATGAATAACACA GCTGGCGCGTTTCCCAACAAGAAAATGGTCTTGCAAGGCTTTGTCTCTGGTGGGACTATA GGTGGAAATAGTAATACTCCCCATATTAGTTCCACATTTACTGCTGCAACACCTGGGGGA TATACTTCTAGTCAGCCAGCTAGAGATGGAGCTAACCAGAAAAGTTCAGAGAGTTCAAAG GAGAGGTCCAGAGAGAGACGGAGGCCTTCTGGTTGGGATCGTTGA

Peptide Sequence

PEP ID	Solyc01g079330.3.1
PEP Infomation	RNA helicase DEAD3
Sequence	MSKRKFGFEGFGINRQTTYNFERNQAPQRLYVPPSSRSGGSHDNYEDTDLDNIEYDEHDA VGGNNNDGGGGGGEDDEIDPLDAFMEGIHQEMKAAPPPKPKEKLDKYKDDVDDDPMESFL RAKKDVGLQLAADALHAGYNSDEEVYAAAKAVDAGLVEYDSDDNPIVVDKKKIEPITALD HSEIDYEPFNKDFYEEKPSISGMSDQEVNEYRTGLAIRVSGFDVPRPIKTFEDTGFSAEL MKAISKQGYERPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE EGPIGVICAPTRELAHQIFVEAKKFSKSHGIRVSAVYGGMSKLDQYKELKAGCEIVVATP GRLIDMIRKKAFTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRK VEKLAREILTDPVRVTVGEIGTANEDITQIVEVIPSDAEKLPWLLEKLPGLIDNGDVLVF ASKKATVDEIESQLAQKGFRVAALHGDKDQVSRTETLQKFKSGIYHVLIATDVAARGLDI KSLKSVVNYDIAKDMDMHVHRIGRTGRAGDKDGTAFTLITHKEARFAGELANSLVAAGQT VSVELMDLAMKDGRFRSKRDARKGGGKRAKGRGGGNNKGVRGVDFGLGIGYNPESNNPLQ SAAPSRSAAVNSLRTGMMSQFKSSFVAASSNSQNQGMNNTAGAFPNKKMVLQGFVSGGTI GGNSNTPHISSTFTAATPGGYTSSQPARDGANQKSSESSKERSRERRRPSGWDR*

Transcript Sequence

Transcript ID	Solyc01g079330.3.1
Transcript Infomation	RNA helicase DEAD3
Sequence	CGAGCAACCAAACATTTCACGATGTGTATAATATCCTTGTAAAAATGGATTAGCAAAAAG AAAGGAAAAAACCAAAATAAAATAGCCCGTGGGCCGGCCTTAGTTCAGTCGCCGTTCCCC GCTGTTCATATTAGCTTCCGTTAAGCGGCAAAAAAAATAGGCGTTTTTCAGAAACAAACC GATGATAAGCAAGGTGGTTTAGATTTTAGAATTTGGATAGCTCTCTTTTCTCTGGCCGGA ATTTGTTAGATAATACCATATCTGTATATTCAGTTTTTTTTTAGGGTTCAGTAAACTAGG GTTTGAACTTTTGAATCAAACGGATATGTCGAAGAGAAAATTTGGATTCGAAGGATTTGG CATTAATCGGCAAACAACGTACAACTTCGAGCGAAATCAAGCTCCTCAGCGACTGTATGT TCCGCCATCCTCACGTTCTGGAGGTAGCCATGACAATTACGAAGATACCGACTTAGATAA CATTGAGTACGATGAACACGACGCTGTCGGAGGGAACAACAATGATGGAGGCGGAGGAGG TGGTGAAGATGATGAAATTGATCCACTTGATGCGTTTATGGAAGGGATTCATCAAGAAAT GAAGGCTGCACCGCCTCCTAAGCCAAAAGAGAAGTTGGATAAGTATAAAGATGATGTAGA TGATGATCCGATGGAGAGTTTTCTGAGAGCGAAGAAGGATGTAGGTTTACAATTGGCGGC TGATGCTCTTCACGCTGGTTATAATTCCGACGAGGAGGTGTATGCAGCAGCAAAGGCTGT TGATGCAGGATTAGTTGAGTATGACTCCGACGATAATCCTATTGTTGTTGATAAAAAGAA GATTGAGCCGATTACTGCTCTGGATCATAGTGAGATTGACTATGAGCCTTTCAACAAGGA TTTTTACGAGGAAAAGCCTTCTATTTCAGGTATGAGCGATCAGGAAGTTAATGAATATAG GACAGGCTTGGCCATTCGTGTATCAGGCTTTGATGTACCAAGGCCAATTAAGACATTTGA AGACACTGGTTTTTCTGCTGAGTTGATGAAAGCTATCAGTAAACAGGGATATGAAAGGCC TACGCCAATACAGTGTCAAGCATTACCAATTGTGCTCTCTGGGAGAGATATTATTGGTAT TGCTAAAACTGGGTCCGGTAAGACTGCTGCCTTTGTGCTTCCTATGATTGTCCACATCAT GGATCAGCCTGAACTTCAGAAAGAAGAAGGCCCCATTGGAGTTATTTGTGCACCCACTAG GGAATTAGCACATCAAATATTTGTGGAGGCAAAGAAATTCTCGAAATCGCATGGTATCCG TGTGTCTGCAGTTTATGGAGGAATGTCTAAATTGGATCAATACAAAGAACTAAAGGCTGG GTGTGAGATTGTTGTTGCTACTCCAGGGAGGTTGATAGATATGATCAGAAAGAAGGCATT TACAATGTTGAGAGCAACTTATCTAGTGCTTGATGAGGCAGATCGGATGTTTGACCTTGG TTTTGAGCCTCAAATAAGGTCCATTGTTGGTCAAATTAGACCTGATCGCCAAACATTGCT CTTTTCAGCAACTATGCCCCGCAAAGTTGAGAAGCTTGCCAGAGAAATATTGACGGATCC TGTAAGGGTTACTGTGGGTGAGATTGGCACGGCTAATGAGGATATTACACAAATAGTTGA AGTGATTCCTTCGGATGCTGAAAAATTGCCTTGGCTTCTGGAGAAGCTCCCTGGACTGAT TGACAATGGTGATGTTCTTGTCTTTGCTTCGAAAAAGGCAACAGTGGATGAGATTGAATC TCAATTGGCTCAGAAGGGATTTAGAGTTGCAGCTCTCCATGGTGACAAGGATCAAGTTTC TCGTACGGAGACGCTGCAAAAATTTAAATCTGGCATATATCATGTTCTCATTGCAACTGA TGTTGCTGCTCGTGGTCTTGACATCAAATCACTTAAGTCAGTGGTGAACTATGATATAGC TAAAGATATGGACATGCATGTTCACAGAATTGGTAGAACAGGTCGTGCTGGTGACAAGGA TGGAACGGCCTTCACTCTTATTACTCATAAGGAAGCACGTTTTGCTGGTGAACTGGCGAA CAGTTTGGTTGCTGCTGGTCAAACTGTGTCTGTGGAACTAATGGACCTTGCTATGAAGGA CGGAAGGTTTCGGTCCAAAAGGGATGCAAGGAAAGGAGGTGGAAAAAGGGCCAAAGGAAG GGGAGGAGGAAACAACAAAGGTGTACGAGGTGTGGATTTTGGTCTAGGGATTGGATACAA TCCTGAATCAAATAACCCTCTCCAGAGCGCTGCTCCAAGCCGTTCTGCAGCTGTTAATTC CCTGAGGACAGGCATGATGTCACAATTTAAAAGTAGCTTTGTTGCTGCATCATCAAATTC TCAAAATCAAGGGATGAATAACACAGCTGGCGCGTTTCCCAACAAGAAAATGGTCTTGCA AGGCTTTGTCTCTGGTGGGACTATAGGTGGAAATAGTAATACTCCCCATATTAGTTCCAC ATTTACTGCTGCAACACCTGGGGGATATACTTCTAGTCAGCCAGCTAGAGATGGAGCTAA CCAGAAAAGTTCAGAGAGTTCAAAGGAGAGGTCCAGAGAGAGACGGAGGCCTTCTGGTTG GGATCGTTGATTTGTTATTTAGTACTGTGGGATATGCATGGTTTACGTGTCACTCCTCAT CATGGTCTAAGTTGGTGACTTTTCTTTCAAACTCACCATTTGCATCAAGGAAATGAAAGG AAGATAAATTGTTATATCACATAACAAGTAGCGAGTATGCAGAGTCCAATCAGACTGGTG TCCATTGCAGAGATAGCTTGGGAGGAAGTTATGGTGCTTCTGAAATGGTTCATGTAAAAT GATCTTTATTGTCCAAAAGTGTATGTATTTGGTTCTCTTGATACATCAAAATTGTTCCTG CAACTTTAATACGTTTCTGGTCTTGGGAAAATTTTAACATTTTGGCTAATAGGGAAGAGA CTCAAGTGTAAATTATTCACTTCGGCTGCTGTTTCAATTGCACTGCTAACTTTTGCTACT TGTGGATTATGATGTAAGGACTTCTAAAGACCGTCAAGTCCTCCCAAAACTCGATTTTTC GAAGATGAGTTACGACATGGGGCCGTGGGTTTCGGAAGAGCCAAGCAACATAGCTTAGGG ATGAACTCAATTTTAATCTGGTCCTGAAATTTTCTGCTTCAAAATTATATCTTCTCATTG ATACTTATAAGAGGGATATGGTAAAGCCATATGCTATCTCAAGTGTTCTTATGGCTGTCA AACTGTAGGTTATATCATATATGATTGCATCCACAATTTAAGAATGAACCAAGATTTTTG AGATTTATGATTAATCTAAATTATATATATTTTGGTGATTATAAATTATTT