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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g074020.3.1
CDS Infomation

LOW QUALITY:HIT-type Zinc finger family protein (AHRD V3.3 *** AT1G04945.4)
Sequence

ATGGAGAAGGAACAAGAATCAAACCCTAACCCAATTTCATCAGTTGAATGTGAAGAGTGC
AAGTTAAATCCATGGAAGTATAAATGCCCAGGTTGCTCTATACGTACTTGTAGTCTCCCT
TGCGTCAATTCCCACAAGCAAAGGACTGCTTGCAATGGCAAAAAATCCCTCACTGAAGTT
CTCCCTCTTTCTCAATTCGACGATAACATCCTTTTATCAGATTATAATATGCTTGAGGAT
GTTAAAAGGTTTGCTGAATCTGCAAGAAGAATGAGACAGAGGCTATGTGGCTACTCTCGT
TTTAAGCTTCCTTTCCCTCTTAAAAACCTTCGTAGAGCTGCAGACAGTCGCAGAACTAAA
ATACACTTTCTGTCCAGTGGAATGTCAAAGAGGGAGAAAAATCAAACTTATTACAACAAC
AGGAATAAATTCATATCTTGGACAATTGAATGGCGGTTTAATTCAACAGACGTTGTCTTG
ATTGACCACGGAGTGCATGAAAACACAAGCCTCATCTCTGTGCTCGAGACTCATTTGAAA
CCTGGCCCGTGGAATCATCCACTGAAGCAATTTTGTGAAGAGCCTTTGGACAGTCTTAAA
CTTTTCATTCGCAAACATTCAAAGGGGTCGAAATCACCTTTTTGTGAGTTGATTTCAAAA
GCTCCATTGCGTGAGCAACTAGCCAATAAAGCTATTCTGGAGTACCCTGTGATTCATGTT
TTTCTGCCATCACACAACTATGATTTTGAAGTAATCAAATCTTCCGTTCCTCAAAAAGTT
GAGCGAAAAGTGCTGCATTGCAGTGATAGTCCAAGTCCCAAGGGAGCGATGTTCAGGGAG
GAGGATATAGGGGATGATGGATCATCAGACCCACACATTTCAGATCTCTTGAGTTTTGAC
AGGTTAAATACAACATTCCAGACCTCTAACAAGTCATCAGACGTGTTATCAGTTGTCGAG
GAGGACACTGCATCTGTACTTGGTGATACATTGATAAGTTTTGATTCACAAGTTATGTCA
ACGAAAGAGATGGACCCGATTGGAGAAAAGTATTGGTCATTGCTGGGTGACATTTTACCA
ATGGAAGATGAATTAGAGGAAGGAGAGATAGCTCCACTTTAA

Peptide Sequence

PEP ID

Solyc01g074020.3.1
PEP Infomation

LOW QUALITY:HIT-type Zinc finger family protein (AHRD V3.3 *** AT1G04945.4)
Sequence

MEKEQESNPNPISSVECEECKLNPWKYKCPGCSIRTCSLPCVNSHKQRTACNGKKSLTEV
LPLSQFDDNILLSDYNMLEDVKRFAESARRMRQRLCGYSRFKLPFPLKNLRRAADSRRTK
IHFLSSGMSKREKNQTYYNNRNKFISWTIEWRFNSTDVVLIDHGVHENTSLISVLETHLK
PGPWNHPLKQFCEEPLDSLKLFIRKHSKGSKSPFCELISKAPLREQLANKAILEYPVIHV
FLPSHNYDFEVIKSSVPQKVERKVLHCSDSPSPKGAMFREEDIGDDGSSDPHISDLLSFD
RLNTTFQTSNKSSDVLSVVEEDTASVLGDTLISFDSQVMSTKEMDPIGEKYWSLLGDILP
MEDELEEGEIAPL*

Transcript Sequence

Transcript ID

Solyc01g074020.3.1
Transcript Infomation

LOW QUALITY:HIT-type Zinc finger family protein (AHRD V3.3 *** AT1G04945.4)
Sequence

AAACCCTGAAAGCAGAAAACTGAAGAATAAGCAGACAAACACCAAAAAGTTCAAAAAAAA
AATTGAAGAGCGACCGTAAGCTGTGTAATGGAGAAGGAACAAGAATCAAACCCTAACCCA
ATTTCATCAGTTGAATGTGAAGAGTGCAAGTTAAATCCATGGAAGTATAAATGCCCAGGT
TGCTCTATACGTACTTGTAGTCTCCCTTGCGTCAATTCCCACAAGCAAAGGACTGCTTGC
AATGGCAAAAAATCCCTCACTGAAGTTCTCCCTCTTTCTCAATTCGACGATAACATCCTT
TTATCAGATTATAATATGCTTGAGGATGTTAAAAGGTTTGCTGAATCTGCAAGAAGAATG
AGACAGAGGCTATGTGGCTACTCTCGTTTTAAGCTTCCTTTCCCTCTTAAAAACCTTCGT
AGAGCTGCAGACAGTCGCAGAACTAAAATACACTTTCTGTCCAGTGGAATGTCAAAGAGG
GAGAAAAATCAAACTTATTACAACAACAGGAATAAATTCATATCTTGGACAATTGAATGG
CGGTTTAATTCAACAGACGTTGTCTTGATTGACCACGGAGTGCATGAAAACACAAGCCTC
ATCTCTGTGCTCGAGACTCATTTGAAACCTGGCCCGTGGAATCATCCACTGAAGCAATTT
TGTGAAGAGCCTTTGGACAGTCTTAAACTTTTCATTCGCAAACATTCAAAGGGGTCGAAA
TCACCTTTTTGTGAGTTGATTTCAAAAGCTCCATTGCGTGAGCAACTAGCCAATAAAGCT
ATTCTGGAGTACCCTGTGATTCATGTTTTTCTGCCATCACACAACTATGATTTTGAAGTA
ATCAAATCTTCCGTTCCTCAAAAAGTTGAGCGAAAAGTGCTGCATTGCAGTGATAGTCCA
AGTCCCAAGGGAGCGATGTTCAGGGAGGAGGATATAGGGGATGATGGATCATCAGACCCA
CACATTTCAGATCTCTTGAGTTTTGACAGGTTAAATACAACATTCCAGACCTCTAACAAG
TCATCAGACGTGTTATCAGTTGTCGAGGAGGACACTGCATCTGTACTTGGTGATACATTG
ATAAGTTTTGATTCACAAGTTATGTCAACGAAAGAGATGGACCCGATTGGAGAAAAGTAT
TGGTCATTGCTGGGTGACATTTTACCAATGGAAGATGAATTAGAGGAAGGAGAGATAGCT
CCACTTTAAATTCGTCGTTGCCTTAAGCTGATTATGTTGTCTACCCCACGTGTTGAGTAA
AATGGTTTGCTTTAAGCTCCAGTATCTTGAGTTTTGGTTTCTCCCGTCGAGATGTGAAAG
ATCCACCGGAGAGTGGCTTGACCATCGACTCAACTCAACGTGGAGAAAAGGTTAGGAATC
TGTCAAGCTAAGATACAGAATGCAGCTTCATAGAAGCAGTGTACCCATTGTAGTTCAGTT
AGCAGCAGCATTTAACGTTGCTGGTGCTAGATGATATCACTTGAGCATTGTATTTAAACA
AAACTATAG