Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g068390.3.1
CDS Infomation	LIM domain and RING finger protein (AHRD V3.3 *** A0A0B2SF36_GLYSO)
Sequence	ATGGATGATAGCTGTGCAGTCTGTGCTGAAACCCTTGAATGGGTTGCCTATGGAGCTTGC GGTCACAAAGATGTTTGCTCTACCTGTGTTGCTCGTCTTCGATTCATCTGCGATGATCGC CGATGTTGTATTTGCAAAACTGAGGCTGATGTTGTATTTGTCACCAAGGCTTTAGGGGAT TATACAAATATGATTGGTGACTTTTCAGTATTTCCATTTGAACCAAAACAAGGCAAAAGT GGTTCTTATTGGTATCATGAGGACACCCAGGCTTTCTTTGATGATTTTGACCATTACAAG ATGATCCTGGCAATGTGCAGGCTTTCTTGTAGTGTGTGTGATAAGATGGAGGGGCCAGAT GTTGATGGAGTGAAGAGAAGAGCAAGGTTCAAAAATATTGATCAGTTAAAAGGACACCTG TTCCATAAGCACAAGTTGCACATGTGCAGCTTATGTTTGGAAGGAAGAAAGATATTTATC TGTGAGCAGAAGCTGTACACAAGGGCTCAGCTGAATCAGCATATACACACAGGTGACTCT GAGGTTGATGGTACTGAAAGTGAAAGAGGTGGATTCATGGGTCATCCTCTTTGTGAATTC TGTAGGACCCCATTTTATGGTGATAATGAGTTGTATTCTCACATGTCGACTGAACATTAT ACTTGTCACATGTGCCAGAGGCAGCACCCTGGGCAATACGAATACTACAAGAATTATGAT GACCTAGAGATCCACTTCCGCAGAGATCATTTCTTATGTGAAGACGGGAGCTGTCTTGCG AAAAAATTTATTGTTTTCCAGTCTGAAGCTGAGTTGAAGAGGCACAATACTCTCGAGCAT GGAGGTCGTATGTCGCGTTCCCAACGCAGTGCTGCTTTGCAGATACCAACAAGTTTCCGA TATCGCCGTAGTAGTGAACAGGTTAATCGTCGTGGAAGGGGACAATCATTTAGGCGTGAT AATGCTGAGAGTGAACTCTCCATGGCCATTCAAGCCAGTTTAGAGACCGCTAATGCAGAT GGAAGACTGCATGATACATCAGGCAGTAGGAGGGTAGTTCCTGATCAAACGGTAACAGAT GATGCTGATCTCCTTGTTCAACCTTTTGATTCTTTGACTACTGATTCTGAGCCAGCTTCA AGATATCTACAAGCTGTATCTCAAATTTCCAGAAATTCTCAGCTGGAAGAATCTTCATTT CCTCCTCTTGCTGCGCCTCCTGTTAATAGTCAACCAAGACCTCAGTCTGATGCACCCATG AACACTATGGCATCACATCTACGCCGAAAGCAAAACAAAAGTACAAAGCTTCCTAATTCA TCTCCTGCATGGCCAGCAACAACCGGTCACTCACCACCGGTAATTGGTCATCAGCCTGCC TGGCCTGTGATAAGTAGTGCTTCTGGATCATCATCTAATTCCAGGCATAGTAAGGCAGTC GTGAACAAACCTTCTGCACCAGTAATTACCCGTGGACAAGCTTGGCCTGCTGTTAATAGT GCTTTTGGATCAGCATCAGGCTCTACTCAGGTTAAAACGTTGACAGCAGCAGATGGACCT CCATCATCTAGTCATTTGAACTCTGTTGCTTCTCGATCTTCATTAGCACATGAATCATCT TCTAGCTCCGTTGGTTCATCCAGGAGTTGGGCCCACAGCAATCGAATTAGCCATTCCTCG TCAGCCCCAAACCTTGTTCAGAGTGGGTCTTTTGACTCTTCTACTACTGATTTTCCTCCA GTCTCTGCTGCACAGTCTGGCAAACTTCCTGCAAGTGGCCAGCAGGCAGTTACAAATGTG GAAGATGTTCAAACCGCAAATAAATCTTTGGTAGAAAGGATGCATATTGCTCTAGATTTT GATCAAGACAAATTCACTGCATTTAAGGACATCTCTGCGGAATATCGTCAAGGTTTAATT GATGCTGAGACATATCTGGCATATGCCGCGCAGTTTGGCTTGTCACATCTCGTTCTTGAG TTGGCTAGACTATGCCCTGATGCTGAAAGGCAAAAAGCATTAATTGACACCTATAATGCT AATTTAGGAGGCACTGTCCCTATACAGAATCGTCAAAGTGGTATCAATCGCTTGAAAGAT GGTAGAAGTTCAAAGAATGGTAAAGGCAAGTCAATAGATGCTGGAAGTGTTACTTCAAAG GATATTGTGGCAGATAACATTTTAAGTACTGTGAGGAAATTGCAGTCTAGCCATAAGATT CCTGAAGATGATGTGGAAGTTTTGTCTAGAGATGGTTATCGGTCTGCTAAAGGTAAATCA AAATTGACTCCGAATGAATCCGAGGAAGAATTGAACTCCCGAGGCAAGCCTTTAAAGCTG GATGCCCGCCAGAATGACTTGTCTGCTAAAGATGAGTCAAATCACAGGCCGGGGAATAAT GATGGGAAAGGCAAGCAGCGGAAGAAAACCTCAAAGTTTCACAGAGTTCGCTTAGGTGAT GGATCTGTTGAAACACTTTTAAATCTCAATAGTTCAAACCCTGATCTGGATCCGAACCCA GATCAAAAGGAGACATCAGATGACCAAGGTAACCCTGAAAGTTTGCCTGTGCGTGGTGTT TGGCGAAATGGAGGTGGTCAAAAGCTTGTAGCTATGACTTCCAAAGGTCCAAAAAAGTGA

Peptide Sequence

PEP ID	Solyc01g068390.3.1
PEP Infomation	LIM domain and RING finger protein (AHRD V3.3 *** A0A0B2SF36_GLYSO)
Sequence	MDDSCAVCAETLEWVAYGACGHKDVCSTCVARLRFICDDRRCCICKTEADVVFVTKALGD YTNMIGDFSVFPFEPKQGKSGSYWYHEDTQAFFDDFDHYKMILAMCRLSCSVCDKMEGPD VDGVKRRARFKNIDQLKGHLFHKHKLHMCSLCLEGRKIFICEQKLYTRAQLNQHIHTGDS EVDGTESERGGFMGHPLCEFCRTPFYGDNELYSHMSTEHYTCHMCQRQHPGQYEYYKNYD DLEIHFRRDHFLCEDGSCLAKKFIVFQSEAELKRHNTLEHGGRMSRSQRSAALQIPTSFR YRRSSEQVNRRGRGQSFRRDNAESELSMAIQASLETANADGRLHDTSGSRRVVPDQTVTD DADLLVQPFDSLTTDSEPASRYLQAVSQISRNSQLEESSFPPLAAPPVNSQPRPQSDAPM NTMASHLRRKQNKSTKLPNSSPAWPATTGHSPPVIGHQPAWPVISSASGSSSNSRHSKAV VNKPSAPVITRGQAWPAVNSAFGSASGSTQVKTLTAADGPPSSSHLNSVASRSSLAHESS SSSVGSSRSWAHSNRISHSSSAPNLVQSGSFDSSTTDFPPVSAAQSGKLPASGQQAVTNV EDVQTANKSLVERMHIALDFDQDKFTAFKDISAEYRQGLIDAETYLAYAAQFGLSHLVLE LARLCPDAERQKALIDTYNANLGGTVPIQNRQSGINRLKDGRSSKNGKGKSIDAGSVTSK DIVADNILSTVRKLQSSHKIPEDDVEVLSRDGYRSAKGKSKLTPNESEEELNSRGKPLKL DARQNDLSAKDESNHRPGNNDGKGKQRKKTSKFHRVRLGDGSVETLLNLNSSNPDLDPNP DQKETSDDQGNPESLPVRGVWRNGGGQKLVAMTSKGPKK*

Transcript Sequence

Transcript ID	Solyc01g068390.3.1
Transcript Infomation	LIM domain and RING finger protein (AHRD V3.3 *** A0A0B2SF36_GLYSO)
Sequence	GAAAAACGAAGCGGTGTTATACTTGTCCCGAGAAGAACAAAGCTTCGGAACCCTAAAAAG GGCAAAATTCACTTTGCATCGGCGCGAGGTGTACAAATTATTCCTTCGAAGAAACCCTAG ATCAAAAATCTTGTTAATCCATGGATGATAGCTGTGCAGTCTGTGCTGAAACCCTTGAAT GGGTTGCCTATGGAGCTTGCGGTCACAAAGATGTTTGCTCTACCTGTGTTGCTCGTCTTC GATTCATCTGCGATGATCGCCGATGTTGTATTTGCAAAACTGAGGCTGATGTTGTATTTG TCACCAAGGCTTTAGGGGATTATACAAATATGATTGGTGACTTTTCAGTATTTCCATTTG AACCAAAACAAGGCAAAAGTGGTTCTTATTGGTATCATGAGGACACCCAGGCTTTCTTTG ATGATTTTGACCATTACAAGATGATCCTGGCAATGTGCAGGCTTTCTTGTAGTGTGTGTG ATAAGATGGAGGGGCCAGATGTTGATGGAGTGAAGAGAAGAGCAAGGTTCAAAAATATTG ATCAGTTAAAAGGACACCTGTTCCATAAGCACAAGTTGCACATGTGCAGCTTATGTTTGG AAGGAAGAAAGATATTTATCTGTGAGCAGAAGCTGTACACAAGGGCTCAGCTGAATCAGC ATATACACACAGGTGACTCTGAGGTTGATGGTACTGAAAGTGAAAGAGGTGGATTCATGG GTCATCCTCTTTGTGAATTCTGTAGGACCCCATTTTATGGTGATAATGAGTTGTATTCTC ACATGTCGACTGAACATTATACTTGTCACATGTGCCAGAGGCAGCACCCTGGGCAATACG AATACTACAAGAATTATGATGACCTAGAGATCCACTTCCGCAGAGATCATTTCTTATGTG AAGACGGGAGCTGTCTTGCGAAAAAATTTATTGTTTTCCAGTCTGAAGCTGAGTTGAAGA GGCACAATACTCTCGAGCATGGAGGTCGTATGTCGCGTTCCCAACGCAGTGCTGCTTTGC AGATACCAACAAGTTTCCGATATCGCCGTAGTAGTGAACAGGTTAATCGTCGTGGAAGGG GACAATCATTTAGGCGTGATAATGCTGAGAGTGAACTCTCCATGGCCATTCAAGCCAGTT TAGAGACCGCTAATGCAGATGGAAGACTGCATGATACATCAGGCAGTAGGAGGGTAGTTC CTGATCAAACGGTAACAGATGATGCTGATCTCCTTGTTCAACCTTTTGATTCTTTGACTA CTGATTCTGAGCCAGCTTCAAGATATCTACAAGCTGTATCTCAAATTTCCAGAAATTCTC AGCTGGAAGAATCTTCATTTCCTCCTCTTGCTGCGCCTCCTGTTAATAGTCAACCAAGAC CTCAGTCTGATGCACCCATGAACACTATGGCATCACATCTACGCCGAAAGCAAAACAAAA GTACAAAGCTTCCTAATTCATCTCCTGCATGGCCAGCAACAACCGGTCACTCACCACCGG TAATTGGTCATCAGCCTGCCTGGCCTGTGATAAGTAGTGCTTCTGGATCATCATCTAATT CCAGGCATAGTAAGGCAGTCGTGAACAAACCTTCTGCACCAGTAATTACCCGTGGACAAG CTTGGCCTGCTGTTAATAGTGCTTTTGGATCAGCATCAGGCTCTACTCAGGTTAAAACGT TGACAGCAGCAGATGGACCTCCATCATCTAGTCATTTGAACTCTGTTGCTTCTCGATCTT CATTAGCACATGAATCATCTTCTAGCTCCGTTGGTTCATCCAGGAGTTGGGCCCACAGCA ATCGAATTAGCCATTCCTCGTCAGCCCCAAACCTTGTTCAGAGTGGGTCTTTTGACTCTT CTACTACTGATTTTCCTCCAGTCTCTGCTGCACAGTCTGGCAAACTTCCTGCAAGTGGCC AGCAGGCAGTTACAAATGTGGAAGATGTTCAAACCGCAAATAAATCTTTGGTAGAAAGGA TGCATATTGCTCTAGATTTTGATCAAGACAAATTCACTGCATTTAAGGACATCTCTGCGG AATATCGTCAAGGTTTAATTGATGCTGAGACATATCTGGCATATGCCGCGCAGTTTGGCT TGTCACATCTCGTTCTTGAGTTGGCTAGACTATGCCCTGATGCTGAAAGGCAAAAAGCAT TAATTGACACCTATAATGCTAATTTAGGAGGCACTGTCCCTATACAGAATCGTCAAAGTG GTATCAATCGCTTGAAAGATGGTAGAAGTTCAAAGAATGGTAAAGGCAAGTCAATAGATG CTGGAAGTGTTACTTCAAAGGATATTGTGGCAGATAACATTTTAAGTACTGTGAGGAAAT TGCAGTCTAGCCATAAGATTCCTGAAGATGATGTGGAAGTTTTGTCTAGAGATGGTTATC GGTCTGCTAAAGGTAAATCAAAATTGACTCCGAATGAATCCGAGGAAGAATTGAACTCCC GAGGCAAGCCTTTAAAGCTGGATGCCCGCCAGAATGACTTGTCTGCTAAAGATGAGTCAA ATCACAGGCCGGGGAATAATGATGGGAAAGGCAAGCAGCGGAAGAAAACCTCAAAGTTTC ACAGAGTTCGCTTAGGTGATGGATCTGTTGAAACACTTTTAAATCTCAATAGTTCAAACC CTGATCTGGATCCGAACCCAGATCAAAAGGAGACATCAGATGACCAAGGTAACCCTGAAA GTTTGCCTGTGCGTGGTGTTTGGCGAAATGGAGGTGGTCAAAAGCTTGTAGCTATGACTT CCAAAGGTCCAAAAAAGTGATGCAGCAGTAGGAGGTAGAGGACAACAGGACAGTGTTTTG GCTTGTAGAGAGGGAGGTTTGATTTTCCTCTTTCCTCTGGACATAATTCTTTGGCACCGG TTTTTGTAGCAACTTCAACATGAACTGTGGCTTATCCATGATCTTGAAAAGGTTTGATTT CAAGTATTTATGGTTTTCAAAACAAAGCAGTTCTGCAATTATAGGCTCTGTTGTTTTTGT TTCTTTCTGCTATTGATAGCTCTCAATTCTGCCTTAACTATATGCTAGTGGCACAGATAG ACAACTTCCTTCAAAGATGGGGTTTTAAAACTGTATATTGATAATACTGAGTACATGGAT AAAGTGGTTTTGTTGATCAGAAAAAAAAAGGATGATCATCTTTTATTTATTTATCTAATT TAGA