Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g068240.3.1
CDS Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7IGQ8_MEDTR)
Sequence

ATGAGTGATTCTAAGATATTTTTATTTGGTTCATTTACTGAAGATGAAACAAAGTCATTG
CTGAACCAGCCATCTGGTTGTGATGGGAATAAGCACGTGGAAGAAAAGGTGCCAGTTAAT
TCCTCAGAATCGGAGCCTGGTTTTTCTTTTGGAAGTTTCGGTGCTGTATCCAATTCTCAA
CCCGCTTCTTCAAAAGAGAGAGTAGGCTCAGATTCCTCTACTACTCTCAAAGAGGAGAAA
GCTGGAGCAGATAACTTGCTCAGAGAAATCAATCAGAATGGAGATGTCCACAATGATTAC
TACATCAATGGACATGAAGAATCTGCAATGGCACACAATATTGACTTGAGCAATTTATGT
GTGTTGGAAGATGAGGCTAAAGCCATCAACAAGTTGTCTAGAACTACTGGACGAGATGAT
GATGCACTACTCAGTAAAGGAAAATTGAATGGGACCACTAGCAATTCAGCAAAAATTTTA
CATTCAGAAGAGGCCCTCCCAGAGGTATCTAGTGGTCCTCTTGATGTTGCGGGCTTGCTA
CCTCGTGGTTTAATCAACCCAGGGAACTTATGCTTCCTTAATGCTACATTACAAGCTCTT
TTGTCCTGTTCTCCTTTTGTTGAGCTTTTGCTAAAGCTAAGGATACTCAGTATTTCCAAG
GCTGAGTATCCAACATTAGCTGCATTTGTGGGGTTTCTTTCTCAGTTTGTTGTACCTAGT
CCTACAAGTTCAATGAAGAAAGATGCAACCAGTGTTGAAGTTGGTACTCCCTTCAGCCCA
GCAATGTTTGACGCAGTTCTGAAGAAATTTACTCCTGATGTGCCTAAGTCCATTTCTGGC
AGACCAAGACAAGAAGATGCACAGGAGTTCCTGAGTTTTGTAATGGATCAGATGCATGGT
GAATTACTAAAGCTTGAAGGGCAATCATGTTCAAGTGGGAAAAATTCTTCTGTTGTTTCA
TCGGAAGACGATGAGGAATGGGAAACTGTTGGGCCAAAGAACAAATCTGCAGTCACAAGA
ACTCAGGACTTCGTTCCTTCAAATTTGAGTGCCATTTTTGGGGGGCAGTTGAAGAGCCTT
GTTAAAGCGAGAGGGAACAAAGCCTCTGCGACAGTTCAACCATTTTTGGTGGTCCATCTT
GACATTTCACACGAAGCTGTTCATAACATTCAAGATGCTCTCCGCCTATTTTCTGCCCCC
GAGACACTTGAGGGATATAGAACTGCCGCAGGAAAGGTTGGAGTGTCTACTGCTAGGAAA
TCCATAAGCATACAGACACTGCCTAAGATGATGATTTTGCACCTGAAGCGGTTTGGTTAT
GGAAGCTATGGAAGTACCAAATTGCTTAAACCGGTGCATTTTCCTCTGGAACTAGTGATA
AGCCGTGATTTGCTTGCTTCTTCGACTACTGAGGGTCGACAATATCAACTTGTGTCCACA
ATCACCCACCACGGTAGGGAAGCTTCTAAGGGGCATTACACTGCTGATTGTCGTCACCAG
AGTGGGAAGTGGTTGCGGTTTGATGATGCCTCTGTTACTGCTGTCACCACCAACAGAGTG
CTGCATGATCAAGCTTACGTTCTATTCTATAAACAAGTATAG

Peptide Sequence

PEP ID

Solyc01g068240.3.1
PEP Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7IGQ8_MEDTR)
Sequence

MSDSKIFLFGSFTEDETKSLLNQPSGCDGNKHVEEKVPVNSSESEPGFSFGSFGAVSNSQ
PASSKERVGSDSSTTLKEEKAGADNLLREINQNGDVHNDYYINGHEESAMAHNIDLSNLC
VLEDEAKAINKLSRTTGRDDDALLSKGKLNGTTSNSAKILHSEEALPEVSSGPLDVAGLL
PRGLINPGNLCFLNATLQALLSCSPFVELLLKLRILSISKAEYPTLAAFVGFLSQFVVPS
PTSSMKKDATSVEVGTPFSPAMFDAVLKKFTPDVPKSISGRPRQEDAQEFLSFVMDQMHG
ELLKLEGQSCSSGKNSSVVSSEDDEEWETVGPKNKSAVTRTQDFVPSNLSAIFGGQLKSL
VKARGNKASATVQPFLVVHLDISHEAVHNIQDALRLFSAPETLEGYRTAAGKVGVSTARK
SISIQTLPKMMILHLKRFGYGSYGSTKLLKPVHFPLELVISRDLLASSTTEGRQYQLVST
ITHHGREASKGHYTADCRHQSGKWLRFDDASVTAVTTNRVLHDQAYVLFYKQV*

Transcript Sequence

Transcript ID

Solyc01g068240.3.1
Transcript Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7IGQ8_MEDTR)
Sequence

CATTGATAAAACAGAAATTTGCTAACTCATATATAAAGTGAACCGCAGCCTCTTTTAGGC
AAAAAAAAACCTAACCTAAAACATTCACAAAACTCACGAAAAACCCAAAATCCTTTTTTG
TTTCAATCCTTGTCTTTATTGGTGTTTGAGTTCTACTGTTATTGGGGATTATTCGATGCT
TCTACTGTTCGTTATTGGATTTTCTTCATTTAATCTTAAATGCCCTGTTTCTCCCTTTTT
GTATCTTCCTATTTCATGTCTTATATTGATGCAGCATCAAGGGTTTCAAAGCAATCCTTG
AATTTTCATAACTTCACCGTAAAGTTGTTAACTTTAGCTTATATTATTCAGAAATCAACA
ATCAGTTCCGGCACTGCTGTTTTCTGCACAACATGAGTGATTCTAAGATATTTTTATTTG
GTTCATTTACTGAAGATGAAACAAAGTCATTGCTGAACCAGCCATCTGGTTGTGATGGGA
ATAAGCACGTGGAAGAAAAGGTGCCAGTTAATTCCTCAGAATCGGAGCCTGGTTTTTCTT
TTGGAAGTTTCGGTGCTGTATCCAATTCTCAACCCGCTTCTTCAAAAGAGAGAGTAGGCT
CAGATTCCTCTACTACTCTCAAAGAGGAGAAAGCTGGAGCAGATAACTTGCTCAGAGAAA
TCAATCAGAATGGAGATGTCCACAATGATTACTACATCAATGGACATGAAGAATCTGCAA
TGGCACACAATATTGACTTGAGCAATTTATGTGTGTTGGAAGATGAGGCTAAAGCCATCA
ACAAGTTGTCTAGAACTACTGGACGAGATGATGATGCACTACTCAGTAAAGGAAAATTGA
ATGGGACCACTAGCAATTCAGCAAAAATTTTACATTCAGAAGAGGCCCTCCCAGAGGTAT
CTAGTGGTCCTCTTGATGTTGCGGGCTTGCTACCTCGTGGTTTAATCAACCCAGGGAACT
TATGCTTCCTTAATGCTACATTACAAGCTCTTTTGTCCTGTTCTCCTTTTGTTGAGCTTT
TGCTAAAGCTAAGGATACTCAGTATTTCCAAGGCTGAGTATCCAACATTAGCTGCATTTG
TGGGGTTTCTTTCTCAGTTTGTTGTACCTAGTCCTACAAGTTCAATGAAGAAAGATGCAA
CCAGTGTTGAAGTTGGTACTCCCTTCAGCCCAGCAATGTTTGACGCAGTTCTGAAGAAAT
TTACTCCTGATGTGCCTAAGTCCATTTCTGGCAGACCAAGACAAGAAGATGCACAGGAGT
TCCTGAGTTTTGTAATGGATCAGATGCATGGTGAATTACTAAAGCTTGAAGGGCAATCAT
GTTCAAGTGGGAAAAATTCTTCTGTTGTTTCATCGGAAGACGATGAGGAATGGGAAACTG
TTGGGCCAAAGAACAAATCTGCAGTCACAAGAACTCAGGACTTCGTTCCTTCAAATTTGA
GTGCCATTTTTGGGGGGCAGTTGAAGAGCCTTGTTAAAGCGAGAGGGAACAAAGCCTCTG
CGACAGTTCAACCATTTTTGGTGGTCCATCTTGACATTTCACACGAAGCTGTTCATAACA
TTCAAGATGCTCTCCGCCTATTTTCTGCCCCCGAGACACTTGAGGGATATAGAACTGCCG
CAGGAAAGGTTGGAGTGTCTACTGCTAGGAAATCCATAAGCATACAGACACTGCCTAAGA
TGATGATTTTGCACCTGAAGCGGTTTGGTTATGGAAGCTATGGAAGTACCAAATTGCTTA
AACCGGTGCATTTTCCTCTGGAACTAGTGATAAGCCGTGATTTGCTTGCTTCTTCGACTA
CTGAGGGTCGACAATATCAACTTGTGTCCACAATCACCCACCACGGTAGGGAAGCTTCTA
AGGGGCATTACACTGCTGATTGTCGTCACCAGAGTGGGAAGTGGTTGCGGTTTGATGATG
CCTCTGTTACTGCTGTCACCACCAACAGAGTGCTGCATGATCAAGCTTACGTTCTATTCT
ATAAACAAGTATAGGCAACCTGTTTATGGAGCTGGGATAGAAGTAGACATTCTTAAGCCA
TTGGACATTGCAACAACCGGCTTCTGCAGTGTGGTGCAGTCCAGGGTTGTCTGAGATAAC
TACTGTGTTTCTTCTTACAAGGTCATCAGGGAAATGGAGCATCCATTATCATCCATGTAT
TGTGTTAAATGTATGGAATTTTGTTACCAGTTTCATTTTGTACCCTCTCATCATTGTACT
AGGAAAATTTGACTATTCTGAAGTGAGCGTCGAGGTCTAGATGTTTCTTGATGTTCGATA
ATCGATATATGAGTCTGTATCCTCTCTTCAGTTATATGATATAGAAGCATTTGCTTATTG
ATAGATTAGTATGCTG