Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g068210.3.1
CDS Infomation

Glutamate dehydrogenase, putative (AHRD V3.3 *** B9RQ63_RICCO)
Sequence

ATGCTACTTCCAACTGGTGGGGGTGGGATGAATTCTACAATGGATGACATGAACTTAATT
CATCAGGCTCAGAGGCATCATCTTGTAGTGAGAGAGATAGGAGAAGAGATTGATTTGGAA
ATAGGACCTGGGGATGATGACCCTTCATTTAGTAATAATACTTTGATCAATGTTCCACCA
CAAGAATCTACAGCTGAAGACCATGACGAGAGCAAGCAGATGATGATTCATCAGGCTTCC
GGTGGGAATCAGGACTTGTTGAAGACCCAACCAGCGAAAAAGAAAAAGAAGGTTGTTAAA
AGATGGAGAGAGGAGTGGGCAGATACGTATAAATGGGCATATGTTGATGTGAAAGATGGC
ACAGCAAGGATATTTTGCTCTGTTTGCAGAGAATATGGTAGGAAGCATAGGAGGAATCCA
TATGGAAATGAAGGCAGCCGAAACATGCAGATGAGTGCTCTGGAGGAGCATAATAATAGT
TTACTTCACAAAGAAGCTCTTCGTCTCCAAATGGCATCCAAAGATAAGATTGTTGTTGAT
AAACCTTTATATGTTAAAGCTCTTATGTCAAAAACGGCTGGATCGATTATTGAAGCTGCA
CTGAAAAGGGATCCTCATGAACTAGAATTCATACAGTATGTTCAAGAAGCGGTTCATGCT
TTAGAAAGAGTCATTTCAAAGAACTCAAGTTATGTAAGCACCATGGAGCGGTTATTAGAA
CCTGAGCGCACAATTGTTTTTCGCGTGCCGTGGGTTGATGATAGGGGCGAGACGCATGTG
AACCGAGGGTTTCGGGTTCATTTTAATCAGACTCTTGGTCCATGCAGGGGTGGTCTCCGG
TTCCATCCGTCAATGAACTTGAGTATTGCCAAATTTCTTAGCTTTGGACAGACTTTGAAA
AATGCTTTGTCGCCTTACCGACTTGGGGGTTCTTCAGGTGGAAGTGATTTTGATCCTAAA
AGCAAAAGTGATGGTGAGGTCATGCGATTTTGTCAGAGTTTTATGAATGAACTGTATCGT
TATTTGGGTCCTGAAAAGGATCTTCCTTCGGAGGAGATGGGTGTTGGTACTCGAGAAATG
GGCTTTTTGCATGGACAATATCGCCGACTGGCGGGTCATTCACAGGGAACTTTTACAGGA
CCAAGAGTTAATTGGTCAGGCTCCAGTCTTCGAACTGAGGCTACTGGCTACGGATTGGTT
TTCTTTGCTCAACTTATGCTTGCAGACATGAACAAAGAACTAAAAGGATTAAGGTGTGCA
GTTAGCGGTTCAGGAAAGATTGCAATGCATGTCCTAGAGAAGCTTATTGCTTATGGGGCC
GTTCCCATCACCATATCTGATGCAAAGGGTTATCTGGTGGATGATGATGGATTTGATTTC
TTGAAGATATCTTTCCTGAGAGACATCAAAGCTCAGCAGAGAAGCTTAAGAGACTACTCA
AAGACTTATGCTCGCTCAAAGTACTATGATGAAGCGAAGCCTTGGAGTGAAAGGTGTGAT
GTTGCATTCCCCTGTGCCTCACAGAATGAAATTAATCAATCTGACGCCATTAACTTGGTT
AACTCTGGTTGTCGTATACTTGTAGAAGGCTCCAATATGCCATGTACTGCTGAAGCAGTA
GACGTTTTGAGAAAAGCTAATGTCCTAGTTGCTCCTTCTATTGCTGCTGGTGTGGGAGGG
GTTGTTGCAGGGGAACTTGAACTGAAAGAGTGCAATTTGAACTGGTCTCCAGAGGATTTT
GAGTCTAAATTACAGGAGGCTATGAAACAGACTTACCAGAGAGCCCTGAAGGCAGCAGCT
GATTTTGGTTATCAAAAGGAAAGTCCAGAGGCATTGGTCCATGGAGCTGTTATCTCTGCT
TTCATAACGATCGCCAATGGTATGGTGGACCAAGGATGTGTATAA

Peptide Sequence

PEP ID

Solyc01g068210.3.1
PEP Infomation

Glutamate dehydrogenase, putative (AHRD V3.3 *** B9RQ63_RICCO)
Sequence

MLLPTGGGGMNSTMDDMNLIHQAQRHHLVVREIGEEIDLEIGPGDDDPSFSNNTLINVPP
QESTAEDHDESKQMMIHQASGGNQDLLKTQPAKKKKKVVKRWREEWADTYKWAYVDVKDG
TARIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVD
KPLYVKALMSKTAGSIIEAALKRDPHELEFIQYVQEAVHALERVISKNSSYVSTMERLLE
PERTIVFRVPWVDDRGETHVNRGFRVHFNQTLGPCRGGLRFHPSMNLSIAKFLSFGQTLK
NALSPYRLGGSSGGSDFDPKSKSDGEVMRFCQSFMNELYRYLGPEKDLPSEEMGVGTREM
GFLHGQYRRLAGHSQGTFTGPRVNWSGSSLRTEATGYGLVFFAQLMLADMNKELKGLRCA
VSGSGKIAMHVLEKLIAYGAVPITISDAKGYLVDDDGFDFLKISFLRDIKAQQRSLRDYS
KTYARSKYYDEAKPWSERCDVAFPCASQNEINQSDAINLVNSGCRILVEGSNMPCTAEAV
DVLRKANVLVAPSIAAGVGGVVAGELELKECNLNWSPEDFESKLQEAMKQTYQRALKAAA
DFGYQKESPEALVHGAVISAFITIANGMVDQGCV*

Transcript Sequence

Transcript ID

Solyc01g068210.3.1
Transcript Infomation

Glutamate dehydrogenase, putative (AHRD V3.3 *** B9RQ63_RICCO)
Sequence

TATCAAATTAGTCCCTTGTCTTCATTATTCACCCACTTTCTTCCCCCAAAATCCCCCCAA
TTGCAGAGAGCGAGTCAGTGGACTCGCCAAATTGATAACTTCATAGCAAAATTCAATTGC
TCCGACACTATTCTCTTTCAGTTTTACCCTATTTTATAGCATTCTACAGTTGGAATCAAC
CTTTACCCAGTAGCAGAAGCTTGGAGGCACCTTGCTGGTGAACTGGACCGACATGGCAAA
ACAGCTCTTGTAGAAGAGGAAAACTTGGGAGTTACATTTCAGAAAGCTTGAAACAAGTAT
CTGATCAAACCAATTTCAGTGGGTTCTTGAAAACAAGCTGGCCAAATCATACTGTATATA
AATTGTCATGCTGAATGCTACTTCCAACTGGTGGGGGTGGGATGAATTCTACAATGGATG
ACATGAACTTAATTCATCAGGCTCAGAGGCATCATCTTGTAGTGAGAGAGATAGGAGAAG
AGATTGATTTGGAAATAGGACCTGGGGATGATGACCCTTCATTTAGTAATAATACTTTGA
TCAATGTTCCACCACAAGAATCTACAGCTGAAGACCATGACGAGAGCAAGCAGATGATGA
TTCATCAGGCTTCCGGTGGGAATCAGGACTTGTTGAAGACCCAACCAGCGAAAAAGAAAA
AGAAGGTTGTTAAAAGATGGAGAGAGGAGTGGGCAGATACGTATAAATGGGCATATGTTG
ATGTGAAAGATGGCACAGCAAGGATATTTTGCTCTGTTTGCAGAGAATATGGTAGGAAGC
ATAGGAGGAATCCATATGGAAATGAAGGCAGCCGAAACATGCAGATGAGTGCTCTGGAGG
AGCATAATAATAGTTTACTTCACAAAGAAGCTCTTCGTCTCCAAATGGCATCCAAAGATA
AGATTGTTGTTGATAAACCTTTATATGTTAAAGCTCTTATGTCAAAAACGGCTGGATCGA
TTATTGAAGCTGCACTGAAAAGGGATCCTCATGAACTAGAATTCATACAGTATGTTCAAG
AAGCGGTTCATGCTTTAGAAAGAGTCATTTCAAAGAACTCAAGTTATGTAAGCACCATGG
AGCGGTTATTAGAACCTGAGCGCACAATTGTTTTTCGCGTGCCGTGGGTTGATGATAGGG
GCGAGACGCATGTGAACCGAGGGTTTCGGGTTCATTTTAATCAGACTCTTGGTCCATGCA
GGGGTGGTCTCCGGTTCCATCCGTCAATGAACTTGAGTATTGCCAAATTTCTTAGCTTTG
GACAGACTTTGAAAAATGCTTTGTCGCCTTACCGACTTGGGGGTTCTTCAGGTGGAAGTG
ATTTTGATCCTAAAAGCAAAAGTGATGGTGAGGTCATGCGATTTTGTCAGAGTTTTATGA
ATGAACTGTATCGTTATTTGGGTCCTGAAAAGGATCTTCCTTCGGAGGAGATGGGTGTTG
GTACTCGAGAAATGGGCTTTTTGCATGGACAATATCGCCGACTGGCGGGTCATTCACAGG
GAACTTTTACAGGACCAAGAGTTAATTGGTCAGGCTCCAGTCTTCGAACTGAGGCTACTG
GCTACGGATTGGTTTTCTTTGCTCAACTTATGCTTGCAGACATGAACAAAGAACTAAAAG
GATTAAGGTGTGCAGTTAGCGGTTCAGGAAAGATTGCAATGCATGTCCTAGAGAAGCTTA
TTGCTTATGGGGCCGTTCCCATCACCATATCTGATGCAAAGGGTTATCTGGTGGATGATG
ATGGATTTGATTTCTTGAAGATATCTTTCCTGAGAGACATCAAAGCTCAGCAGAGAAGCT
TAAGAGACTACTCAAAGACTTATGCTCGCTCAAAGTACTATGATGAAGCGAAGCCTTGGA
GTGAAAGGTGTGATGTTGCATTCCCCTGTGCCTCACAGAATGAAATTAATCAATCTGACG
CCATTAACTTGGTTAACTCTGGTTGTCGTATACTTGTAGAAGGCTCCAATATGCCATGTA
CTGCTGAAGCAGTAGACGTTTTGAGAAAAGCTAATGTCCTAGTTGCTCCTTCTATTGCTG
CTGGTGTGGGAGGGGTTGTTGCAGGGGAACTTGAACTGAAAGAGTGCAATTTGAACTGGT
CTCCAGAGGATTTTGAGTCTAAATTACAGGAGGCTATGAAACAGACTTACCAGAGAGCCC
TGAAGGCAGCAGCTGATTTTGGTTATCAAAAGGAAAGTCCAGAGGCATTGGTCCATGGAG
CTGTTATCTCTGCTTTCATAACGATCGCCAATGGTATGGTGGACCAAGGATGTGTATAAA
ATTGCAGCATTTTCTTGACATAGCCTCGTGTTATATCCAAAATACATTTTCATTTGGCAT
CAATAACAAAGAAAGCGCGCCGTTGGTTCCATCCGCATTGTTGGCTACTTTCATGATCTT
GCACAGTGCTTGGTAGTGTAGATGGTGAGAGGAATGTATGTTTATCATTGTAATGTACAT
GTATTATGCAGGTGAGCTATGTCTAAAACATCGATAGGATACACTTTATTATCTAGTTAG
CTAGGTTATTATGTTAGCTGGGAAAATACAAAGGTTGAAAGCAAAACAATTGTATTATGG
GAAACTTTCACATATAGTCTCTTAAAAATAATTAATTA