Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g068050.3.1
CDS Infomation

tRNA guanosine-2'-O-methyltransferase TRM13 (AHRD V3.3 *** A0A0B0MRQ4_GOSAR)
Sequence

ATGGCGGCACGCTGCAACTTCTGGCTTCCCAAGAAGAAGAGATTTTGCTCAAACGTCCTT
CTCCGAGATTCACAGTTCTGCGGAAACCATACTCAAAGATCTGATGGACAATGGGTTCCT
TGCCCTATACACCCTTCTCACTCTGTGCTGGAAGAGAATCTGCAGAGTCATCTTAAGCGA
TGCCCATTTTTCAAACAAGCTCAATCTTTGTCGATTCAGCCTTTTTACCAGGAGGGTATT
AATGCTGGCAAAGAAGAAGAAGAAGGGGTGCAGAATTTTAGTTCAGAGATGAAGAGGAAT
GCAGTTCACGGGATGACCCTTTTTGAATTCTCCCAGTTGATTAACAAGATCAAGTCTATT
CATGCTTCCATATGTAGTGACATTGGTGATTCATTCAAGATTCCTCAAGCTTGTGATATT
TGGACTAATCGACAAGTGGACCGGGGTTTACCATTTCAAGAGAAACATGTAATGCAGCAG
GCCTCTATTCTAGGGAATCTAGAAGAATTTGGGGTTCTGAAAAGTTGTAAGGATGATGCT
GTATCAGGGCCAGTTAAGTTAGAAGCATCCGGGGACGACGATGATGTTCCCGCCGTTGTT
GAATTCGGAGCAGGAAGAGGGTACTTGACACAAGTTCTGGCTGACTGTTACAGAATTAAG
AAGATTTTATTAGTTGAACGCAAATCATACAAGCTCAAGGCTGATCGAAGTTTGCGACAG
AAAGAGAGTGTTACGCTGGAGCGATTGAGAATTGACATTGAGGACCTAAAGTTGAATTCT
GTTGAGAGTTTACAGGGAGTTCCTTATCTAGCAATTGGCAAACATCTTTGTGGCCCTGCT
ACAGATATGACTCTAAGATGTTGCATCAGCAAACAATGCAATCAACATAATGATGCTCCT
TCTGATTCGACGTGCCACCTGATCGGCCTAGCTATAGCTACTTGCTGCCATCATCTTTGT
CAGTGGAAGCATTACATAAATAAGCGATATATGTTGGATTTGGGAATCACTAAGGATGAT
TTCAATGCCATGACATGGCTTACCAGCTGGGCTGTTGATGCAGATCATGGTTCAGATCTT
TGTGGCACTGGGTCTTTTGATCTACAAATCAGGGAAAACGAGCACGTAGAATCAGATCCA
AATACATATGACGTCAAAAACATGGTGAAGGATATGAAGGCTGTGGATAGAGCTGTTGTA
GGATTGATGTGCAAGGATATAATAGATGTTGGAAGGTTTATGTGGCTCAACGAACATGGA
CTTGAATGTGAGCTTGTCAAGTATGTCCCGTCAAATATCTCTCCAGAAAACCGATTGTTG
GTTGCTAGGCAGAAAAGTTGA

Peptide Sequence

PEP ID

Solyc01g068050.3.1
PEP Infomation

tRNA guanosine-2'-O-methyltransferase TRM13 (AHRD V3.3 *** A0A0B0MRQ4_GOSAR)
Sequence

MAARCNFWLPKKKRFCSNVLLRDSQFCGNHTQRSDGQWVPCPIHPSHSVLEENLQSHLKR
CPFFKQAQSLSIQPFYQEGINAGKEEEEGVQNFSSEMKRNAVHGMTLFEFSQLINKIKSI
HASICSDIGDSFKIPQACDIWTNRQVDRGLPFQEKHVMQQASILGNLEEFGVLKSCKDDA
VSGPVKLEASGDDDDVPAVVEFGAGRGYLTQVLADCYRIKKILLVERKSYKLKADRSLRQ
KESVTLERLRIDIEDLKLNSVESLQGVPYLAIGKHLCGPATDMTLRCCISKQCNQHNDAP
SDSTCHLIGLAIATCCHHLCQWKHYINKRYMLDLGITKDDFNAMTWLTSWAVDADHGSDL
CGTGSFDLQIRENEHVESDPNTYDVKNMVKDMKAVDRAVVGLMCKDIIDVGRFMWLNEHG
LECELVKYVPSNISPENRLLVARQKS*

Transcript Sequence

Transcript ID

Solyc01g068050.3.1
Transcript Infomation

tRNA guanosine-2'-O-methyltransferase TRM13 (AHRD V3.3 *** A0A0B0MRQ4_GOSAR)
Sequence

ATTGTTTGATTTAATCAAATTAGAGTTAAAAAGTTAGCTTATATTCTCCATTGATTTACT
TATTTCGGTAAATCTACAATAAATCTAGTGTGGCAGCAGGGTTTAAGCCGAGCAGGACGG
AGATGGCGGCACGCTGCAACTTCTGGCTTCCCAAGAAGAAGAGATTTTGCTCAAACGTCC
TTCTCCGAGATTCACAGTTCTGCGGAAACCATACTCAAAGATCTGATGGACAATGGGTTC
CTTGCCCTATACACCCTTCTCACTCTGTGCTGGAAGAGAATCTGCAGAGTCATCTTAAGC
GATGCCCATTTTTCAAACAAGCTCAATCTTTGTCGATTCAGCCTTTTTACCAGGAGGGTA
TTAATGCTGGCAAAGAAGAAGAAGAAGGGGTGCAGAATTTTAGTTCAGAGATGAAGAGGA
ATGCAGTTCACGGGATGACCCTTTTTGAATTCTCCCAGTTGATTAACAAGATCAAGTCTA
TTCATGCTTCCATATGTAGTGACATTGGTGATTCATTCAAGATTCCTCAAGCTTGTGATA
TTTGGACTAATCGACAAGTGGACCGGGGTTTACCATTTCAAGAGAAACATGTAATGCAGC
AGGCCTCTATTCTAGGGAATCTAGAAGAATTTGGGGTTCTGAAAAGTTGTAAGGATGATG
CTGTATCAGGGCCAGTTAAGTTAGAAGCATCCGGGGACGACGATGATGTTCCCGCCGTTG
TTGAATTCGGAGCAGGAAGAGGGTACTTGACACAAGTTCTGGCTGACTGTTACAGAATTA
AGAAGATTTTATTAGTTGAACGCAAATCATACAAGCTCAAGGCTGATCGAAGTTTGCGAC
AGAAAGAGAGTGTTACGCTGGAGCGATTGAGAATTGACATTGAGGACCTAAAGTTGAATT
CTGTTGAGAGTTTACAGGGAGTTCCTTATCTAGCAATTGGCAAACATCTTTGTGGCCCTG
CTACAGATATGACTCTAAGATGTTGCATCAGCAAACAATGCAATCAACATAATGATGCTC
CTTCTGATTCGACGTGCCACCTGATCGGCCTAGCTATAGCTACTTGCTGCCATCATCTTT
GTCAGTGGAAGCATTACATAAATAAGCGATATATGTTGGATTTGGGAATCACTAAGGATG
ATTTCAATGCCATGACATGGCTTACCAGCTGGGCTGTTGATGCAGATCATGGTTCAGATC
TTTGTGGCACTGGGTCTTTTGATCTACAAATCAGGGAAAACGAGCACGTAGAATCAGATC
CAAATACATATGACGTCAAAAACATGGTGAAGGATATGAAGGCTGTGGATAGAGCTGTTG
TAGGATTGATGTGCAAGGATATAATAGATGTTGGAAGGTTTATGTGGCTCAACGAACATG
GACTTGAATGTGAGCTTGTCAAGTATGTCCCGTCAAATATCTCTCCAGAAAACCGATTGT
TGGTTGCTAGGCAGAAAAGTTGAGTGTTAACTTGCTGCTGAACACCATATTTGTATTATC
ATATATTTAGCTTTCTCAGACCTGCAGCTCTAATTCACAATTTGATTCTGTATACTGGAT
ATTAGCTCCTTTTTTAGTAGATGTTTCTTAGAGGGCTCATATTGTTTTGATGTTTTCTCC
CAGTTTACACTAAAATATTTTATATTTTTAATGTAACGTGATTCTTTTGTTG