Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g067750.3.1
CDS Infomation

dehydroquinate dehydratase/shikimate:NADP oxidoreductase
Sequence

ATGGAGTTGGTTGTAGATTCTGGAGTGAAGAAGATGGAGGGTGAAGCAATGAGGAAGAAT
CAAACTCTAATTTGTGCACCAATTATGGCTGATTCAGTGGATCAAATGTTGATTCTTATG
CAAAAGGCTAAAATTAGTGGGGCTGATCTTGTGGAGGTTCGAGTGGATAGCTTGAAAAGC
TTTAATCCTCGCCCAGATATTGATACCCTGATCAAACAATGCCCTTTGCCTACTCTCTTC
ACTTACAGCTATGTTTTGGGCGTGGGGCAGGGGATACTGTTAATACGGTACTATAAAGGC
ATAGGGCCCACTTGGGAAGGTGGTCAGTATGCTGGTGATGAAAAGAGTCGATTGGATGCA
CTTCGATTAGCGATGGAGTTGGGAGCTGATTACATTGATGTTGAGCTAAAGGCTATTGGC
GAGTTCAACAATGCCCTACATGGAAATAAATCTGCAAAATGCAAACTTATTGTTTCTTCT
CACAACTATGAAAGCACACCGTCAGCTGAGGATCTTGGCAATCTAGTAGCAAGAATACAG
GCATCTGGAGCTGACATTGTGAAATTTGCTACAACTGCACAGGATATCACTGATGTTGCA
CGTGTTTTCCAAATTACTGTTCATTCTCAAGTTCCAATAATAGCCATGGTCATGGGAGAG
AAGGGTTTGATGTCTCGGATACTTTGTCCAAAATTTGGTGGATACCTCACGTTTGGTACT
CTTGAAGTGGGAAAAGTTTCAGCTCCTGGGCAACCAACAGTCGAAGATCTTCTGAATTTA
TACAATTTCAGACAGTTGGGACCAGATACCAAAATATTTGGCATTATTGGGAAGCCAGTT
AGCCATAGCAAATCACCTTTATTATATAATGAATCCTTCAGATCAGTTGGGTTTAATGGT
GTTTTCATGCATTTGCTGGTAGATGATATTGCAAACTTTTTCCGGACTTATTCATCATTA
GATTTTGCTGGATTCAGCTGTACAATTCCTCACAAAGAAGCCGCTCTTGACTGCTGTGCT
GAAATTGATCCTACTGCTAAGGCAATAGGGGCTGTCAATTGTATTATAAGGCGACCTGAT
GGGAAGTTATTTGGTTGTAATACAGACTATATCGGTGCTATTTCCGCCATTGAAGAAGGA
TTGCAAGGTTCACAACCTAGTATATCTGGGTCACCTTTGGCTGGTAAATTGTTTGTGGTC
ATTGGTGCTGGTGGCGCTGGAAAGGCGATTGCTTATGGCGCAAAGGAAAAGGGGGCTAGG
GTGGTGATTGCTAATCGTACCTATGAACGAGCGCGAGAACTTGCTATTGTTGTTGGAGCT
GAGGCCTTATCTCTTGACGAGCTTAGCAATTTCCATCCAGAAAATGATATGATTCTTGCA
AATACCACCTCCATAGGCATGCAACCAAAGGTTGATGATACACCAATCTCTAAGGAAGCT
TTGAAGCACTACTCACTTGTTTTCGATGCTGTTTATACACCCAAAATCACTAGACTCCTG
CGAGAAGCTCAGGAGAGTGGAGCAAAAATTGTGACAGGAGTTGAAATGTTTATCGGGCAG
GCATATGAACAATATGAAAGATTTACAGGATTGCCAGCTCCTAAGGAACTTTTCAAGAAT
ATAATGTCTACATACTGA

Peptide Sequence

PEP ID

Solyc01g067750.3.1
PEP Infomation

dehydroquinate dehydratase/shikimate:NADP oxidoreductase
Sequence

MELVVDSGVKKMEGEAMRKNQTLICAPIMADSVDQMLILMQKAKISGADLVEVRVDSLKS
FNPRPDIDTLIKQCPLPTLFTYSYVLGVGQGILLIRYYKGIGPTWEGGQYAGDEKSRLDA
LRLAMELGADYIDVELKAIGEFNNALHGNKSAKCKLIVSSHNYESTPSAEDLGNLVARIQ
ASGADIVKFATTAQDITDVARVFQITVHSQVPIIAMVMGEKGLMSRILCPKFGGYLTFGT
LEVGKVSAPGQPTVEDLLNLYNFRQLGPDTKIFGIIGKPVSHSKSPLLYNESFRSVGFNG
VFMHLLVDDIANFFRTYSSLDFAGFSCTIPHKEAALDCCAEIDPTAKAIGAVNCIIRRPD
GKLFGCNTDYIGAISAIEEGLQGSQPSISGSPLAGKLFVVIGAGGAGKAIAYGAKEKGAR
VVIANRTYERARELAIVVGAEALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEA
LKHYSLVFDAVYTPKITRLLREAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKN
IMSTY*

Transcript Sequence

Transcript ID

Solyc01g067750.3.1
Transcript Infomation

dehydroquinate dehydratase/shikimate:NADP oxidoreductase
Sequence

ATACTCTTTATCTTTTTTTTTTTTTAAAATTCTTATACATAAATAAAATAATAAAATATA
AATACTTGTATATATCTATATCTTTGTCACTTGGAATATTTCAAGCTGGCTGCTGAGGCT
ACATTTCTGTTGTTTACCCATCTGTGTGCTCTAAAGTTGGTTGCCAATGGAGTTGGTTGT
AGATTCTGGAGTGAAGAAGATGGAGGGTGAAGCAATGAGGAAGAATCAAACTCTAATTTG
TGCACCAATTATGGCTGATTCAGTGGATCAAATGTTGATTCTTATGCAAAAGGCTAAAAT
TAGTGGGGCTGATCTTGTGGAGGTTCGAGTGGATAGCTTGAAAAGCTTTAATCCTCGCCC
AGATATTGATACCCTGATCAAACAATGCCCTTTGCCTACTCTCTTCACTTACAGCTATGT
TTTGGGCGTGGGGCAGGGGATACTGTTAATACGGTACTATAAAGGCATAGGGCCCACTTG
GGAAGGTGGTCAGTATGCTGGTGATGAAAAGAGTCGATTGGATGCACTTCGATTAGCGAT
GGAGTTGGGAGCTGATTACATTGATGTTGAGCTAAAGGCTATTGGCGAGTTCAACAATGC
CCTACATGGAAATAAATCTGCAAAATGCAAACTTATTGTTTCTTCTCACAACTATGAAAG
CACACCGTCAGCTGAGGATCTTGGCAATCTAGTAGCAAGAATACAGGCATCTGGAGCTGA
CATTGTGAAATTTGCTACAACTGCACAGGATATCACTGATGTTGCACGTGTTTTCCAAAT
TACTGTTCATTCTCAAGTTCCAATAATAGCCATGGTCATGGGAGAGAAGGGTTTGATGTC
TCGGATACTTTGTCCAAAATTTGGTGGATACCTCACGTTTGGTACTCTTGAAGTGGGAAA
AGTTTCAGCTCCTGGGCAACCAACAGTCGAAGATCTTCTGAATTTATACAATTTCAGACA
GTTGGGACCAGATACCAAAATATTTGGCATTATTGGGAAGCCAGTTAGCCATAGCAAATC
ACCTTTATTATATAATGAATCCTTCAGATCAGTTGGGTTTAATGGTGTTTTCATGCATTT
GCTGGTAGATGATATTGCAAACTTTTTCCGGACTTATTCATCATTAGATTTTGCTGGATT
CAGCTGTACAATTCCTCACAAAGAAGCCGCTCTTGACTGCTGTGCTGAAATTGATCCTAC
TGCTAAGGCAATAGGGGCTGTCAATTGTATTATAAGGCGACCTGATGGGAAGTTATTTGG
TTGTAATACAGACTATATCGGTGCTATTTCCGCCATTGAAGAAGGATTGCAAGGTTCACA
ACCTAGTATATCTGGGTCACCTTTGGCTGGTAAATTGTTTGTGGTCATTGGTGCTGGTGG
CGCTGGAAAGGCGATTGCTTATGGCGCAAAGGAAAAGGGGGCTAGGGTGGTGATTGCTAA
TCGTACCTATGAACGAGCGCGAGAACTTGCTATTGTTGTTGGAGCTGAGGCCTTATCTCT
TGACGAGCTTAGCAATTTCCATCCAGAAAATGATATGATTCTTGCAAATACCACCTCCAT
AGGCATGCAACCAAAGGTTGATGATACACCAATCTCTAAGGAAGCTTTGAAGCACTACTC
ACTTGTTTTCGATGCTGTTTATACACCCAAAATCACTAGACTCCTGCGAGAAGCTCAGGA
GAGTGGAGCAAAAATTGTGACAGGAGTTGAAATGTTTATCGGGCAGGCATATGAACAATA
TGAAAGATTTACAGGATTGCCAGCTCCTAAGGAACTTTTCAAGAATATAATGTCTACATA
CTGAGAGGATCCCTTTCACTTTTCAATCGGGGCTGCTAATTATTATTACTCCTAAATCTG
ACATGATTGTGTTAGAGTTTGCTCTATCTACCACTGTTTGTACTTCAGAGGAAGTAATTT
TGTCCACGTAAATCGTACTTTTTGCGGAAACAGAGGATGTTCAGACATACCAGTTAATCT
ATGGCAGGAAAATCCACCATCTTTCTGGCTATGTTAGAACTCTTGATTCTTTGACAAGTA
TTGTATTTTGGGAGGAAATTCATTAAACAGAGATGTATACATTGCTTCATCATTGTAAAA
TCATACTTAGAAATTCCTCTTGATTATCATCATCATTATTAAATGTTGTCACATTATTGT
ATCATACTAAGACAAATTTTGAATTGAGTTCAATGACTTTTGAGTTGTAAGCATGATGCA
CTGCCAGTTTGTGTTTTAATAAATCCAGGTTCCACTTTACTAGTCCA