Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g067640.3.1
CDS Infomation

Protein kinase superfamily protein (AHRD V3.3 *** AT1G54610.3)
Sequence

ATGGGTTGTGTTTTTGGGAAAGAGATTTCATCTTCTGAGACGCCTAGTGGGGAGGTTGTA
GTTGGAAGGAGGAGAGAAAATGGGGAAGATAGAGATTTGGCAGCACAATCTGGGAGGAGA
GAGAAAGTTGGAACTGTAAATAAGGTGGATGGCGGCGGTGAAGGAAGAGGAGGAGGCAGT
GATGTTGGTGAAGTTCAGAATGGTAGAGATCAGAAGAAGGATGACAATGCACGGCCTAGG
GGTGAGAGGAGAAGGTCTAAACCTAATCCAAGGTTGAGCAATCCACCTAAGAATGTGCAC
GGCGAGCAAGTAGCGGCTGGATGGCCATCCTGGCTCTCTGAGGTAGCTGGAGAGGCTATC
AATGGATGGATTCCACGAAGGGCAGATGCATTTGAGAAGCTGGCTAAGATTGGGCAAGGT
ACTTATAGCAATGTGTATAAAGCTAGAGATAATCTCACGGGGAACATCGTTGCATTAAAG
AAGGTTAGATTTGATAATTTGGAGCCAGAGAGTGTGAAGTTTATGGCAAGAGAGATCTTG
ATTTTGCGCCGCTTGGATCATCCAAATGTTATTACATTGCAAGGATTGGTTACATCAAGG
ATGTCTTGTAGCTTGTACCTTGTGTTTGATTATATGGATCATGATTTAGCTGGACTAGCA
GCAAGCCCTGGAGTCAAGTTCACAGAGGCTCAGGTTAAATGTTACATGCATCAACTATTA
TCAGGGCTTGAACACTGTCACAACCGTCGTGTGTTGCATCGTGATATAAAAGGATCAAAT
CTTCTAATTGACAGTGGGGGAGTTCTGAAGATTGCAGATTTTGGTTTGGCTTCTGTCTTC
GATCCCAATAAAAAGCAGCCTATGACTAGTCGCGTGGTTACTTTATGGTACAGACCCCCA
GAGCTTCTTCTTGGGGCCACAGACTATGGTGTTGGTGTGGACCTCTGGAGTGCTGGTTGT
ATTTTAGCTGAGCTATTAGCTGGGAAGCCCATTATGCCTGGTCGTACAGAGGTTGAGCAG
CTCCACAAGATCTTCAAGCTATGCGGATCTCCGTCAGAAGAGTATTGGAAAAAGTCAAGG
CTTCCACATGCAACTATATTCAAACCTCAGCAATCATACAGAAGATGTATCGCTGAGACC
TTTAAAGATTTCCCACCTTCATCATTGCCATTGATTGAGACTCTTCTGTCCATTGATCCA
GCTGAGCGTCAGACAGCCACAGCTGCATTACATAGTGCATTCTTTACTACCAAACCTTAT
GCTTGTGAACCTTCCATCCTTCCCAAATATCCACCCAGCAAAGAAATGGATGCTAAACGG
CGAGATGAAGATGCTCGAAGGCAAAGGGCTACTGGCAAAGCCAATGCTGATGGTGCGAGG
AGAAATCGCCACCGTGATCGAGCAGTTAGGGCAATCCCTGCTCCTGAAGCCAACGCGGAG
CTGCAAGTTAATATTGATAGGCGGCGTCTAATTACACAAGCAAATGCAAAGAGCAAGAGT
GAAAAGTTTCCTCCACCACACCAGGATGGAACTTTAGGTTATACATTGGGTTCTTCACAT
CACATTGATCCAGCCTACGAACCCTCAGAAGTCCCTTTCACTTCCATGAACTTCTCCTAT
TCCAAAGAACCGATCCAAACATGGTCAGGCCCATTGGTGGAACCTGCCACGGGTGGTGCT
CCAAGAAGAAAGACGAAACCATCAAAGAAGGATTCTAACAAGAAAGGAAAAGAAAGCATG
TAA

Peptide Sequence

PEP ID

Solyc01g067640.3.1
PEP Infomation

Protein kinase superfamily protein (AHRD V3.3 *** AT1G54610.3)
Sequence

MGCVFGKEISSSETPSGEVVVGRRRENGEDRDLAAQSGRREKVGTVNKVDGGGEGRGGGS
DVGEVQNGRDQKKDDNARPRGERRRSKPNPRLSNPPKNVHGEQVAAGWPSWLSEVAGEAI
NGWIPRRADAFEKLAKIGQGTYSNVYKARDNLTGNIVALKKVRFDNLEPESVKFMAREIL
ILRRLDHPNVITLQGLVTSRMSCSLYLVFDYMDHDLAGLAASPGVKFTEAQVKCYMHQLL
SGLEHCHNRRVLHRDIKGSNLLIDSGGVLKIADFGLASVFDPNKKQPMTSRVVTLWYRPP
ELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSR
LPHATIFKPQQSYRRCIAETFKDFPPSSLPLIETLLSIDPAERQTATAALHSAFFTTKPY
ACEPSILPKYPPSKEMDAKRRDEDARRQRATGKANADGARRNRHRDRAVRAIPAPEANAE
LQVNIDRRRLITQANAKSKSEKFPPPHQDGTLGYTLGSSHHIDPAYEPSEVPFTSMNFSY
SKEPIQTWSGPLVEPATGGAPRRKTKPSKKDSNKKGKESM*

Transcript Sequence

Transcript ID

Solyc01g067640.3.1
Transcript Infomation

Protein kinase superfamily protein (AHRD V3.3 *** AT1G54610.3)
Sequence

AAGTGCAATAAAGCTATTACCATTACATTTACTCACTCTCTATTTTTTGCCTTTTCTCAA
TTTTACAAACTCCATTTTTGACCGCCATAAATGGTGGGCTAAACTCAAAATCATTAGTGC
TTCTACTTTCTTGGGCACAAAATCTAGGGTTCTTCAATTAGGCCTTTCTCAGAGTACTAT
TATCTAACAACCCCATTTTCCTTAATCTTGCTTTTATTTGCTCTATCTCAGATTCTTGTT
TCTTTTTACTTGCATTTTTGAAGAACTATTACTTAGTTTGCTTTGATTCTTTCTGGTTTG
CAGCCCCATTTGTTTCTTTTGCTTAGTTAACTGCTGTAAAGTTCATATTTTTAAGCTTAA
TCTTGTTCCATTTGATTGTTTTTCTTGTAAAGTTTGCATTTTTTTGAGGATATTGCATGT
GTGGGGGGATTTTGAATGAGGGAAAAGACTGTTAAGTCTGATGAGAAATGAAGGTTAAGA
TTGTACAAGGATGGGTTGTGTTTTTGGGAAAGAGATTTCATCTTCTGAGACGCCTAGTGG
GGAGGTTGTAGTTGGAAGGAGGAGAGAAAATGGGGAAGATAGAGATTTGGCAGCACAATC
TGGGAGGAGAGAGAAAGTTGGAACTGTAAATAAGGTGGATGGCGGCGGTGAAGGAAGAGG
AGGAGGCAGTGATGTTGGTGAAGTTCAGAATGGTAGAGATCAGAAGAAGGATGACAATGC
ACGGCCTAGGGGTGAGAGGAGAAGGTCTAAACCTAATCCAAGGTTGAGCAATCCACCTAA
GAATGTGCACGGCGAGCAAGTAGCGGCTGGATGGCCATCCTGGCTCTCTGAGGTAGCTGG
AGAGGCTATCAATGGATGGATTCCACGAAGGGCAGATGCATTTGAGAAGCTGGCTAAGAT
TGGGCAAGGTACTTATAGCAATGTGTATAAAGCTAGAGATAATCTCACGGGGAACATCGT
TGCATTAAAGAAGGTTAGATTTGATAATTTGGAGCCAGAGAGTGTGAAGTTTATGGCAAG
AGAGATCTTGATTTTGCGCCGCTTGGATCATCCAAATGTTATTACATTGCAAGGATTGGT
TACATCAAGGATGTCTTGTAGCTTGTACCTTGTGTTTGATTATATGGATCATGATTTAGC
TGGACTAGCAGCAAGCCCTGGAGTCAAGTTCACAGAGGCTCAGGTTAAATGTTACATGCA
TCAACTATTATCAGGGCTTGAACACTGTCACAACCGTCGTGTGTTGCATCGTGATATAAA
AGGATCAAATCTTCTAATTGACAGTGGGGGAGTTCTGAAGATTGCAGATTTTGGTTTGGC
TTCTGTCTTCGATCCCAATAAAAAGCAGCCTATGACTAGTCGCGTGGTTACTTTATGGTA
CAGACCCCCAGAGCTTCTTCTTGGGGCCACAGACTATGGTGTTGGTGTGGACCTCTGGAG
TGCTGGTTGTATTTTAGCTGAGCTATTAGCTGGGAAGCCCATTATGCCTGGTCGTACAGA
GGTTGAGCAGCTCCACAAGATCTTCAAGCTATGCGGATCTCCGTCAGAAGAGTATTGGAA
AAAGTCAAGGCTTCCACATGCAACTATATTCAAACCTCAGCAATCATACAGAAGATGTAT
CGCTGAGACCTTTAAAGATTTCCCACCTTCATCATTGCCATTGATTGAGACTCTTCTGTC
CATTGATCCAGCTGAGCGTCAGACAGCCACAGCTGCATTACATAGTGCATTCTTTACTAC
CAAACCTTATGCTTGTGAACCTTCCATCCTTCCCAAATATCCACCCAGCAAAGAAATGGA
TGCTAAACGGCGAGATGAAGATGCTCGAAGGCAAAGGGCTACTGGCAAAGCCAATGCTGA
TGGTGCGAGGAGAAATCGCCACCGTGATCGAGCAGTTAGGGCAATCCCTGCTCCTGAAGC
CAACGCGGAGCTGCAAGTTAATATTGATAGGCGGCGTCTAATTACACAAGCAAATGCAAA
GAGCAAGAGTGAAAAGTTTCCTCCACCACACCAGGATGGAACTTTAGGTTATACATTGGG
TTCTTCACATCACATTGATCCAGCCTACGAACCCTCAGAAGTCCCTTTCACTTCCATGAA
CTTCTCCTATTCCAAAGAACCGATCCAAACATGGTCAGGCCCATTGGTGGAACCTGCCAC
GGGTGGTGCTCCAAGAAGAAAGACGAAACCATCAAAGAAGGATTCTAACAAGAAAGGAAA
AGAAAGCATGTAAAGTCGAAAGAATGATGTGATTCAACAATTGGTATACTTGAAGGGAGC
TGCAAAGCTTGCAGATTATTGTCCTATACGGTAAGTAAGAAACTTCTCAACAGCATAGAG
AGGTAAAATGCATTTTTTTTGAATCCTAGTATCCTTCTTTTTGTATTCTTTTGGATAATG
AGAATCTTTTCACCATTGTACATGTAAATTTTTACTTCCTTCATATTAGCAGACTCTGTT
TAGATCAATGAAAATCCTAATAAACAATCTACATCTGTTCTTTCC