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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g067620.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT3G21420.1)
Sequence

ATGGCTCCAGTGCCAAGTTTTCCTGTTAAAGTTGGTCACATTGATGATGTTCAAGAACTG
AAAAAGATTAAACCATCTTCTATTCCTGAAAGATTTGTAAGAGACATGATAGAAAGACCA
AAACTTGCCACAGTTACTACTCCATCTTCTTGTAGTCTTAACATTCCTGTTGTTGATTTG
TCGAGAATCTCGAATAGCCAGGATTTCCATAATGAAATCATGAAGCTTTCTACTTCTTGT
GAAGAGTGGGGATTCTTTCAGGTGATTAACCATGGGATTGACTTGGACTTACTGGAAAAG
ATGGAGAAAATAGCTATGGAGTTCTTCATGTTACCTTTAGAGGAGAAACAGAAATATCCA
ATGGCTCCTGGAACAGTTCAAGGTTATGGTCAAGCTTTTGTCTTCTCAGAAGATCAAAAA
CTTGACTGGTGTAACATGTTTGCTCTTGGTGTGGAACCTCATTTCATTAGGAACCCAAAA
CTCTGGCCAACAAAGCCACTTGATTTTAGTGAAACGGTGGATATATACTCGAGAGAGATA
AGGAAACTATGCAAGAAGTTGTTGAAATACATAGCGATGAGTCTTGGATTGAATGATGAT
ATTTTTGAAGAAATGTTTGGAGTAGCTGTACAAGCAGTGAGGATGAACTACTATCCAGCA
TGTCCTAGACCAGATCTTGTTTTGGGATTAAGTCCCCACTCAGATGGAAGTGCACTAACA
GTGTTGCAACAGGGTAAATGCAGCAGCTCAGTTGGCCTACAAATACTTAAAGACAATGTT
TGGGTGCCTGTTCAACCAATTCCAAATGCACTTGTTATCAACATTGGTGATACCATTGAG
GTTCTAACTAATGGGAGATACAAAAGTGTGGAGCATAGAGCAGTGACACATCAAGAAAAG
GATAGACTATCTATTGTGACATTTTATGCACCAAGTTATGAAATTGAGTTAGGGCCATTG
GAAGAATTGGTTGATGAAAATAACCCTTGTAAGTATAAAAGGTACAATCATGGAGAGTAC
AGCATGCACTATGTTACAAATAAACTTCAAGGGAAAAAGACTCTTGAGTTTGCCAAAATC
TATGACAAGTAA

Peptide Sequence

PEP ID

Solyc01g067620.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT3G21420.1)
Sequence

MAPVPSFPVKVGHIDDVQELKKIKPSSIPERFVRDMIERPKLATVTTPSSCSLNIPVVDL
SRISNSQDFHNEIMKLSTSCEEWGFFQVINHGIDLDLLEKMEKIAMEFFMLPLEEKQKYP
MAPGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPLDFSETVDIYSREI
RKLCKKLLKYIAMSLGLNDDIFEEMFGVAVQAVRMNYYPACPRPDLVLGLSPHSDGSALT
VLQQGKCSSSVGLQILKDNVWVPVQPIPNALVINIGDTIEVLTNGRYKSVEHRAVTHQEK
DRLSIVTFYAPSYEIELGPLEELVDENNPCKYKRYNHGEYSMHYVTNKLQGKKTLEFAKI
YDK*

Transcript Sequence

Transcript ID

Solyc01g067620.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT3G21420.1)
Sequence

CCACGCACAAGCGGAGAAAAAACAAAGCAAAATGAATTTTTCTCTTCGGGGGAAAAATTC
TTTGATTGCATGTTGAATACAAAAACATGTCTTTCTTATTCCACTAGCTAAACCAAATTC
TTACATGTCCTTTTCGTTATTACAACCTTCTTTTTTTATGTCAAAGACCAGAAGCTACGC
ACAAATTCTCATTGGAACTTAGTTATTGTTAACAATGATGTCTATTTTATTTAAGTCTTT
CCGTAGCACCATTAGATTTTTAGCAAGCTGTAAATTTTGTATGTACATATTCCTGTGGCT
CGGATGAGTATTCTTGCTTATATCACTACGGATATAAACACTTTTTTTGTTCTTGTGAAC
ATAACATCCCCTTATTCTTTGCTCTTCTGGAACTGGTGCAAACATAGGTGCTCTCTTCTA
TGTTGTTTCTCCTTAATTACTGATGGTATCGGGGAAACCAGTGCGTGGGATGCTCGTTTA
GCCTCTATATTCATCTCGTTCCTTATTTACCTACGTGCAATGCCTTTTTAAGAACTTTTT
GTGTACATTTACAGAAAAAGTAGCTAAGAAGGAAAGAAAAGACAAAATAAACTCTTCATA
TTAGGAAAGAACTGTACTCAAAACTCAAGATGCTGATGCTATGATCCATATTGGTGGTTG
GTGATTGGATGTAAATGCAAACAATTATAGATTTGTATGTGAACATATATAGAACTTGCA
TGACTGAGAATTTATTAAAGTGCATCAGTTAAGGACCCACACAATAATATAGAGATACTC
ATTCTTTACCCTCTATAAGTACTTGACATATTTCTGAATTGTATGCCTAACAAAGCATAG
ACTTTTACTATCTTGACTAGAAAAAGACTCCATTTTTTCCAAAAAACAAAGTTGTAGTGT
TAGAAAATGGCTCCAGTGCCAAGTTTTCCTGTTAAAGTTGGTCACATTGATGATGTTCAA
GAACTGAAAAAGATTAAACCATCTTCTATTCCTGAAAGATTTGTAAGAGACATGATAGAA
AGACCAAAACTTGCCACAGTTACTACTCCATCTTCTTGTAGTCTTAACATTCCTGTTGTT
GATTTGTCGAGAATCTCGAATAGCCAGGATTTCCATAATGAAATCATGAAGCTTTCTACT
TCTTGTGAAGAGTGGGGATTCTTTCAGGTGATTAACCATGGGATTGACTTGGACTTACTG
GAAAAGATGGAGAAAATAGCTATGGAGTTCTTCATGTTACCTTTAGAGGAGAAACAGAAA
TATCCAATGGCTCCTGGAACAGTTCAAGGTTATGGTCAAGCTTTTGTCTTCTCAGAAGAT
CAAAAACTTGACTGGTGTAACATGTTTGCTCTTGGTGTGGAACCTCATTTCATTAGGAAC
CCAAAACTCTGGCCAACAAAGCCACTTGATTTTAGTGAAACGGTGGATATATACTCGAGA
GAGATAAGGAAACTATGCAAGAAGTTGTTGAAATACATAGCGATGAGTCTTGGATTGAAT
GATGATATTTTTGAAGAAATGTTTGGAGTAGCTGTACAAGCAGTGAGGATGAACTACTAT
CCAGCATGTCCTAGACCAGATCTTGTTTTGGGATTAAGTCCCCACTCAGATGGAAGTGCA
CTAACAGTGTTGCAACAGGGTAAATGCAGCAGCTCAGTTGGCCTACAAATACTTAAAGAC
AATGTTTGGGTGCCTGTTCAACCAATTCCAAATGCACTTGTTATCAACATTGGTGATACC
ATTGAGGTTCTAACTAATGGGAGATACAAAAGTGTGGAGCATAGAGCAGTGACACATCAA
GAAAAGGATAGACTATCTATTGTGACATTTTATGCACCAAGTTATGAAATTGAGTTAGGG
CCATTGGAAGAATTGGTTGATGAAAATAACCCTTGTAAGTATAAAAGGTACAATCATGGA
GAGTACAGCATGCACTATGTTACAAATAAACTTCAAGGGAAAAAGACTCTTGAGTTTGCC
AAAATCTATGACAAGTAATTAATAATCCTCTATAGAGACACACTATTAACTTGAGATGTA
GACTATTGACATAATAATAATGTCTTTTGTAAATTCAGTGGGCAGTTTGTGTACTGTTAA
TATGGAAAGTTCTCTTTGTATAACCTACTTATTGGAGTATAACATAATGGAAGCAAAGTG
GGGTCTTTGTGTTTGAAAATTGTGTCCTTTAGTCTT