Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g067500.3.1
CDS Infomation

Serine/threonine-protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** G7JK96_MEDTR)
Sequence

ATGTACAGTGGCTCAAGCGATGGAGAAGGTCCTGACGCTACGGCGCAACGAAAGATTCCC
CCGCCATCCTCAATGCTTTGGGTTCGAAACCTCCGAAGATACATCGGATCCGGTGCGGGT
CTCGGGTCTGAAGCCCTAATGGAGCTTGAAACAAAAAGAATATTGCTAGATATTTTTAAG
GAGAAGCAACAAAAGAGTGCTGAAGCTGGCACAATTCCTAGCTTTTATAAGAAGAAACCT
GAAGAGGGATCTATCAGTCATAGGGTTCAGAGGTTGGCAAAATACCGATTTTTAAAGAAA
CAATCTGACCTTTTGCTGAATGCTGATGATTTGGATGCTATGTGGGTATGCCTAAGAGAA
AACTGTGTGATAGATGATGCAACTGGTGCAGAAAAGATGAATTATGAAGACTTTTGCCAC
ATTGCCTCTGTATGTACAGAACAAATAGGGCCTAAATGTCGCCGCTTTTTCAGTCCTTCA
AATTTCATGAAGTTTGAGAAGGATGAATCAGGGAGGATTGCCATCCTGCCATTTTACCTA
TATGTGATGCGTACAGTTTCACTTACTCAAGCCCGAATTGACATGAGTGAGCTTGATGAA
GACTCTGATGGTTTCCTTCAACCCCATGAAATGGAAGCCTATATACGGGGCCTGATTCCT
AACCTAGCACAGCTTCGAGACATGCCAGCAGCTTTTGTCCAAATGTATTGCCGTATAGCT
GCACACAAATTTTTCTTCTTTTGTGATCCCCATAGGCGAGGTAAGGCATGCATAAAAAAG
ATTTTACTTAGCAACTGTCTCCAAGAGTTGATGGAACTTCACCAGGAAACTGAGGAGGAA
GTTACTGACACAGAGCAAGCTGAAAACTGGTTTTCCTTGACTTCTGCACAGAGGATTTGT
GACATGTTTCTTGCTCTTGATAAAGATATGAATGGAACATTGAGCAAGCAGGAGCTAAGG
GAATATGCGGATGGTACACTAACAGATATCTTCATTGAAAGAGTTTTTGATGAGCATGTT
CGACGTGGAAAAATTGGAGGCGGCAATGCCCGTGAAATGGATTTTGAAAGTTTCCTTGAC
TTCGTTCTAGCCCTGGAAAACAAGGATGCCCCGGAGGGTCTTACATATTTGTTCAGGTGT
CTTGATCTCCAAGGAAGGGGTTTCTTAACTACAGCGGATATTCACACACTATTCAGAGAT
GTCCATCAAAAATGGATTGAAGGAGGGAACTATGAACTATGCATCGAGGATGTAAGGGAT
GAAATATGGGATATGGTGAAGCCGTCTGACTCTTTGAGGATATCACTGGCTGATTTGCTA
TCATGCAAACAAGGTGGCACTGTTGCAAGCATGCTTATAGATGTGCGTGGTTTCTGGGCC
CATGACAACAGAGAAAATCTTCTACAGGAAGAGGAAGAACCCCAAGAAGAAGGATGA

Peptide Sequence

PEP ID

Solyc01g067500.3.1
PEP Infomation

Serine/threonine-protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** G7JK96_MEDTR)
Sequence

MYSGSSDGEGPDATAQRKIPPPSSMLWVRNLRRYIGSGAGLGSEALMELETKRILLDIFK
EKQQKSAEAGTIPSFYKKKPEEGSISHRVQRLAKYRFLKKQSDLLLNADDLDAMWVCLRE
NCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDESGRIAILPFYL
YVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPAAFVQMYCRIA
AHKFFFFCDPHRRGKACIKKILLSNCLQELMELHQETEEEVTDTEQAENWFSLTSAQRIC
DMFLALDKDMNGTLSKQELREYADGTLTDIFIERVFDEHVRRGKIGGGNAREMDFESFLD
FVLALENKDAPEGLTYLFRCLDLQGRGFLTTADIHTLFRDVHQKWIEGGNYELCIEDVRD
EIWDMVKPSDSLRISLADLLSCKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPQEEG*

Transcript Sequence

Transcript ID

Solyc01g067500.3.1
Transcript Infomation

Serine/threonine-protein phosphatase 2A regulatory subunit B (AHRD V3.3 *** G7JK96_MEDTR)
Sequence

AGCTTATAGTTTAATCTCGTAACGAAACACGAAAATTACTTTACTATAATATATTTTTTC
ATTATACTAAAGTTTTAGCCTTAGTAAAGAGAATTTTCATTAGTTGAGAATAAAAATATG
AGAGGATTATTTTTTCTGAATATCCAAACATACAACTCTATAGTTTCCCGTTTGTTCTCC
TCCGACTTGTGTTCTTCTTCATAGCCACGCTCCCTGTGGACTCAACGGATCGAGCTCCAC
AGAGCAACGAATCTATAAGCTTCTGCTTTGTTCACTGTTGTGATGTACATTTCTAGGGCT
TGAAACTCATCCAAATCAAACCTCATTTGAGAAATTTCTCCAGTTAAAGATCATCTTTTT
TTCGTTTTCTCTTTTGGGAATTTGGTGGGTTGTTAAAGAAGAAGAAGCTCAAGCAATGTA
CAGTGGCTCAAGCGATGGAGAAGGTCCTGACGCTACGGCGCAACGAAAGATTCCCCCGCC
ATCCTCAATGCTTTGGGTTCGAAACCTCCGAAGATACATCGGATCCGGTGCGGGTCTCGG
GTCTGAAGCCCTAATGGAGCTTGAAACAAAAAGAATATTGCTAGATATTTTTAAGGAGAA
GCAACAAAAGAGTGCTGAAGCTGGCACAATTCCTAGCTTTTATAAGAAGAAACCTGAAGA
GGGATCTATCAGTCATAGGGTTCAGAGGTTGGCAAAATACCGATTTTTAAAGAAACAATC
TGACCTTTTGCTGAATGCTGATGATTTGGATGCTATGTGGGTATGCCTAAGAGAAAACTG
TGTGATAGATGATGCAACTGGTGCAGAAAAGATGAATTATGAAGACTTTTGCCACATTGC
CTCTGTATGTACAGAACAAATAGGGCCTAAATGTCGCCGCTTTTTCAGTCCTTCAAATTT
CATGAAGTTTGAGAAGGATGAATCAGGGAGGATTGCCATCCTGCCATTTTACCTATATGT
GATGCGTACAGTTTCACTTACTCAAGCCCGAATTGACATGAGTGAGCTTGATGAAGACTC
TGATGGTTTCCTTCAACCCCATGAAATGGAAGCCTATATACGGGGCCTGATTCCTAACCT
AGCACAGCTTCGAGACATGCCAGCAGCTTTTGTCCAAATGTATTGCCGTATAGCTGCACA
CAAATTTTTCTTCTTTTGTGATCCCCATAGGCGAGGTAAGGCATGCATAAAAAAGATTTT
ACTTAGCAACTGTCTCCAAGAGTTGATGGAACTTCACCAGGAAACTGAGGAGGAAGTTAC
TGACACAGAGCAAGCTGAAAACTGGTTTTCCTTGACTTCTGCACAGAGGATTTGTGACAT
GTTTCTTGCTCTTGATAAAGATATGAATGGAACATTGAGCAAGCAGGAGCTAAGGGAATA
TGCGGATGGTACACTAACAGATATCTTCATTGAAAGAGTTTTTGATGAGCATGTTCGACG
TGGAAAAATTGGAGGCGGCAATGCCCGTGAAATGGATTTTGAAAGTTTCCTTGACTTCGT
TCTAGCCCTGGAAAACAAGGATGCCCCGGAGGGTCTTACATATTTGTTCAGGTGTCTTGA
TCTCCAAGGAAGGGGTTTCTTAACTACAGCGGATATTCACACACTATTCAGAGATGTCCA
TCAAAAATGGATTGAAGGAGGGAACTATGAACTATGCATCGAGGATGTAAGGGATGAAAT
ATGGGATATGGTGAAGCCGTCTGACTCTTTGAGGATATCACTGGCTGATTTGCTATCATG
CAAACAAGGTGGCACTGTTGCAAGCATGCTTATAGATGTGCGTGGTTTCTGGGCCCATGA
CAACAGAGAAAATCTTCTACAGGAAGAGGAAGAACCCCAAGAAGAAGGATGAAGGATTTT
TAAGAGCCAATCATCTGTAATTGCACTAACATCAGATCCTAGTTTTCAGAATAGATTATC
CTGTGTATGTAGAGTATTTGGCTTTTCTTGGTCGTGTGAATGGAATGTGGTTAACAATGC
TGTCATTTAAGGTAGCCTTCTTGGATGCTGAACAAACCTCCAGAAGCTGTATGTTTGAAA
TCTTGTGTACCTGAGAGATTCCTGAAATCGAATCGAAGGTGCTGTTGCTTGATTAACTGG
GATACCCCTACAAATTTGAGCTTGTTTTATATAAGTCTTGTAATGTAAAAGCTATGTCAG
GTTTTCCTGATCTTGTATCATCTCTTCTTTTGGCCAAGTATATTATCCTTTTCATGTACT
TGTTGAGTTTTATCAGTATAAAACTGTTTTACTGTGAGAAACTGAAGTTAAAACCAT