Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g067390.3.1
CDS Infomation	RNA helicase DEAH-box1
Sequence	ATGGCGAGAAACACGAGAGCGAAATCCTCGTCGTCGGAGCCATTATCGGACGGTTCAGAG GAGGAGCAAGTCAACGATCTAGTCAACGATGAGGAAGATGAGGAGGAGCTTGAAGCTGTC GCTAGAGTAGGAGGAAAAAATGTGAGTAATTCAGCTGTTCAGCGCATTTTTCAAGCTCAT TATTATGTGTCAGTATACGTGAAGTTCCAGGAGGAAGACATTGCAGCTAATGAAATCTCC AAGCGTGAAAAGGCACGGTTAAAAGATATGCAGAGGCGTAAGAAGCAAAAGATACAGGAA ATGTTGGATGCGCAGAATGCTGCAATAGAAGCTGACATGAGTAACAAGGGGAAGGGGCGT CTTAAGTATCTTTTGGAGCAGACAGAGTTATTTGCACATTTTGCAAAAGGCGATCAATCG ACTTCAGAAAAGAAGACAAAAGGAAGGGGCCGTCATGCGTCAAAGATAACCGAAGAGGAA GAAGATGAGGAGTATCTCAAAGAAGAAGATGGTGGGCTGTCCGGGAATACACGGCTATTG GCACAACCTTCTTGTATTCAGGGAAAGATGAGGGATTATCAACTTGCTGGTTTGAACTGG ATGATACGGCTATATGAGAACGGCATAAATGGGATACTTGCTGATGAAATGGGTCTTGGT AAGACCTTACAAACCATCTCTTTGCTGGCGTACCTGCATGAATTTAGAGGGATTACTGGT CCTCACATGGTTGTTGCTCCAAAATCCACACTAGGCAATTGGATGAATGAAATCAAACGT TTTTGTCCTATCATACGTGCTGTAAAGTTCCTTGGGAACCCTGAAGAAAGGAGATACATT CGAGAGGATTTGCTAGTTGCTGGGAAGTTTGATGTGTGTGTCACAAGTTTTGAGATGGCT ATCAAAGAGAAGTCTGCTTTACGACGCTTTAATTGGCGTTACATCATCATTGATGAGGCT CATAGAATCAAGAATGAAAATTCTCTTCTTTCCAAAACCATGAGGCTCTACAGCACTAAT TATAGGCTGTTGATCACAGGGACGCCACTTCAGAATAATCTTCATGAGCTCTGGGCGCTT CTGAACTTTTTGCTACCAGAGATCTTTAGCTCGGCTGAGACATTTGATGAGTGGTTTCAA ATATCCGGTGAGAATGACCAGCAGGAGGTGGTCCAACAGCTTCATAAGGTCCTTCGTCCA TTCCTTCTTAGGAGACTGAAGTCTGATGTTGAGAAAGGTCTGCCTCCAAAGAAGGAAACA ATTCTCAAGAAAGATTTTGAGGTTGTTAATTCTGGAGGAGAGCGCAAGCGTCTTCTTAAT ATAGCAATGCAGCTCCGAAAATGTTGTAATCATCCATATCTTTTCCAAGGAGCTGAGCCA GGACCTCCATATACAACCGGAGAGCATCTCATAGAAAATGCTGGCAAAATGGTTCTTCTT GATAAGTTGCTTCCTAAGCTGAAGGAACGAGGCTCAAGGGTTTTAATATTTTCGCAGATG ACACGGCTACTGGACATCCTTGAAGATTACCTGATGTATCGAGGTCACCAGTATTGTCGG ATTGATGGAAACACTGGTGGAGAAGATCGTGATGCTTCTATTGAAGCATATAACAGACCA GGGAGTGAAAAATTTGCCTTCTTATTGTCAACCAGAGCTGGTGGTCTTGGTATCAATCTT GCTACGGCAGATATTGTTATTCTTTATGACAGTGACTGGAATCCACAGGTTGATTTGCAG GCTCAGGACCGCGCCCATAGGATTGGACAGAAGAAGGAAGTCCAAGTATTCCGTTTCTGC ACTGAGTATACAATTGAGGAGAAAGTGATTGAAAGGGCTTATAAGAAGCTGGCACTTGAT GCACTGGTCATCCAACAGGGACGACTGGCTGAGCAAAAAGCTGTTAATAAGGATGAACTG CTGCAGATGGTGCGGTTTGGTGCTGAAATGGTTTTCAGTTCCAAAGATAGCACTATAACA GATGAGGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCAGCACTTGATGCC AAGATGAAGAAGTTTACAGAAGATGCTATCAAATTTAAAATGGACGATACTGCTGATTTG TATGACTTTGAAGACGAGAAGGATGAAAACAAGGCACATTTCAAGAAAATTGCTGGTGAC AATTGGATAGAACCTCCAAGAAGGGAGAGAAAGCGCAATTACTCGGAGTCTGAATATTTC AAGCAAACCATGCGACCAAGTGGTCCTGCTAGACCTAAAGAGCCCAGGATTCCTAGGATG CCTCAGCTGCACGACTTTCAGTTCTTTAATACCCAGAGGCTAAGTGAGCTGTACGAGAAG GAAGTTCGTTTTCTCATGCAAGCTCACCAGAAAAATCAATTAAAAGATAGCATTGAAGTG GAAGAGCCCGAAGATGTCGGAGATCCTTTAACTGCCGACGAGCAGGAAGAGAAGGACAAA TTATTAGAAGAAGGATTTTCAACATGGAGTAGGAGAGATTTCAATACTTTTATCAGGGCA TGTGAGAAGTATGGTCGGAATGACATAGAAAGTATTGCTGCTGAAATGGAAGGAAAGACA GAGGAGGAGCGTTTGGCATGCTTGACATTTGAGCAGTTAAATCTAATGGATGGAGTGCTT GCAGATTATGATAGGATTATAAAGAATATTGAAAGAGGAGAGGCTAGAATTTCACGAAAA GATGAGATCATGAAAGCAATTGGGAAGAAGTTGGACCGCTACAAGAATCCATGGTTGGAG TTGAAGATTCAGTATGGTCAGAACAAAGGAAAATTGTACAATGAGGAGTGTGATCGTTTC ATGATATGTATGGTTCACAAGCTTGGCTATGGAAACTGGGATGAGCTAAAGGCTGCATTC CGAACAGCTCCTTTGTTTCGGTTTGATTGGTTTGTGAAGTCTCGGACAACTCAAGAACTT GCCAGAAGATGTGATACACTTATTCGTTTGGTGGAGAGGGAAAACCAAGAATTTGATGAG AGGGAGAGACAGGCACGCAAAGAAAAGAAACTTGCTAAGAACGCGACACCATCAAAGCGC GCTGTGGCAAGACAAGCAGCCAAAAGCCCTCCCACCTCAAAGAAACGGAAGCAGTCATCA ATGGATGATTTTGTGAGCTCGGCCAAGAGAAGAAGTGATGGTACAACCTAG

Peptide Sequence

PEP ID	Solyc01g067390.3.1
PEP Infomation	RNA helicase DEAH-box1
Sequence	MARNTRAKSSSSEPLSDGSEEEQVNDLVNDEEDEEELEAVARVGGKNVSNSAVQRIFQAH YYVSVYVKFQEEDIAANEISKREKARLKDMQRRKKQKIQEMLDAQNAAIEADMSNKGKGR LKYLLEQTELFAHFAKGDQSTSEKKTKGRGRHASKITEEEEDEEYLKEEDGGLSGNTRLL AQPSCIQGKMRDYQLAGLNWMIRLYENGINGILADEMGLGKTLQTISLLAYLHEFRGITG PHMVVAPKSTLGNWMNEIKRFCPIIRAVKFLGNPEERRYIREDLLVAGKFDVCVTSFEMA IKEKSALRRFNWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWAL LNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET ILKKDFEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLIENAGKMVLL DKLLPKLKERGSRVLIFSQMTRLLDILEDYLMYRGHQYCRIDGNTGGEDRDASIEAYNRP GSEKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFC TEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKDSTIT DEDIDRIIAKGEEATAALDAKMKKFTEDAIKFKMDDTADLYDFEDEKDENKAHFKKIAGD NWIEPPRRERKRNYSESEYFKQTMRPSGPARPKEPRIPRMPQLHDFQFFNTQRLSELYEK EVRFLMQAHQKNQLKDSIEVEEPEDVGDPLTADEQEEKDKLLEEGFSTWSRRDFNTFIRA CEKYGRNDIESIAAEMEGKTEEERLACLTFEQLNLMDGVLADYDRIIKNIERGEARISRK DEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAF RTAPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEFDERERQARKEKKLAKNATPSKR AVARQAAKSPPTSKKRKQSSMDDFVSSAKRRSDGTT*

Transcript Sequence

Transcript ID	Solyc01g067390.3.1
Transcript Infomation	RNA helicase DEAH-box1
Sequence	ATGGCGAGAAACACGAGAGCGAAATCCTCGTCGTCGGAGCCATTATCGGACGGTTCAGAG GAGGAGCAAGTCAACGATCTAGTCAACGATGAGGAAGATGAGGAGGAGCTTGAAGCTGTC GCTAGAGTAGGAGGAAAAAATGTGAGTAATTCAGCTGTTCAGCGCATTTTTCAAGCTCAT TATTATGTGTCAGTATACGTGAAGTTCCAGGAGGAAGACATTGCAGCTAATGAAATCTCC AAGCGTGAAAAGGCACGGTTAAAAGATATGCAGAGGCGTAAGAAGCAAAAGATACAGGAA ATGTTGGATGCGCAGAATGCTGCAATAGAAGCTGACATGAGTAACAAGGGGAAGGGGCGT CTTAAGTATCTTTTGGAGCAGACAGAGTTATTTGCACATTTTGCAAAAGGCGATCAATCG ACTTCAGAAAAGAAGACAAAAGGAAGGGGCCGTCATGCGTCAAAGATAACCGAAGAGGAA GAAGATGAGGAGTATCTCAAAGAAGAAGATGGTGGGCTGTCCGGGAATACACGGCTATTG GCACAACCTTCTTGTATTCAGGGAAAGATGAGGGATTATCAACTTGCTGGTTTGAACTGG ATGATACGGCTATATGAGAACGGCATAAATGGGATACTTGCTGATGAAATGGGTCTTGGT AAGACCTTACAAACCATCTCTTTGCTGGCGTACCTGCATGAATTTAGAGGGATTACTGGT CCTCACATGGTTGTTGCTCCAAAATCCACACTAGGCAATTGGATGAATGAAATCAAACGT TTTTGTCCTATCATACGTGCTGTAAAGTTCCTTGGGAACCCTGAAGAAAGGAGATACATT CGAGAGGATTTGCTAGTTGCTGGGAAGTTTGATGTGTGTGTCACAAGTTTTGAGATGGCT ATCAAAGAGAAGTCTGCTTTACGACGCTTTAATTGGCGTTACATCATCATTGATGAGGCT CATAGAATCAAGAATGAAAATTCTCTTCTTTCCAAAACCATGAGGCTCTACAGCACTAAT TATAGGCTGTTGATCACAGGGACGCCACTTCAGAATAATCTTCATGAGCTCTGGGCGCTT CTGAACTTTTTGCTACCAGAGATCTTTAGCTCGGCTGAGACATTTGATGAGTGGTTTCAA ATATCCGGTGAGAATGACCAGCAGGAGGTGGTCCAACAGCTTCATAAGGTCCTTCGTCCA TTCCTTCTTAGGAGACTGAAGTCTGATGTTGAGAAAGGTCTGCCTCCAAAGAAGGAAACA ATTCTCAAGAAAGATTTTGAGGTTGTTAATTCTGGAGGAGAGCGCAAGCGTCTTCTTAAT ATAGCAATGCAGCTCCGAAAATGTTGTAATCATCCATATCTTTTCCAAGGAGCTGAGCCA GGACCTCCATATACAACCGGAGAGCATCTCATAGAAAATGCTGGCAAAATGGTTCTTCTT GATAAGTTGCTTCCTAAGCTGAAGGAACGAGGCTCAAGGGTTTTAATATTTTCGCAGATG ACACGGCTACTGGACATCCTTGAAGATTACCTGATGTATCGAGGTCACCAGTATTGTCGG ATTGATGGAAACACTGGTGGAGAAGATCGTGATGCTTCTATTGAAGCATATAACAGACCA GGGAGTGAAAAATTTGCCTTCTTATTGTCAACCAGAGCTGGTGGTCTTGGTATCAATCTT GCTACGGCAGATATTGTTATTCTTTATGACAGTGACTGGAATCCACAGGTTGATTTGCAG GCTCAGGACCGCGCCCATAGGATTGGACAGAAGAAGGAAGTCCAAGTATTCCGTTTCTGC ACTGAGTATACAATTGAGGAGAAAGTGATTGAAAGGGCTTATAAGAAGCTGGCACTTGAT GCACTGGTCATCCAACAGGGACGACTGGCTGAGCAAAAAGCTGTTAATAAGGATGAACTG CTGCAGATGGTGCGGTTTGGTGCTGAAATGGTTTTCAGTTCCAAAGATAGCACTATAACA GATGAGGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCAGCACTTGATGCC AAGATGAAGAAGTTTACAGAAGATGCTATCAAATTTAAAATGGACGATACTGCTGATTTG TATGACTTTGAAGACGAGAAGGATGAAAACAAGGCACATTTCAAGAAAATTGCTGGTGAC AATTGGATAGAACCTCCAAGAAGGGAGAGAAAGCGCAATTACTCGGAGTCTGAATATTTC AAGCAAACCATGCGACCAAGTGGTCCTGCTAGACCTAAAGAGCCCAGGATTCCTAGGATG CCTCAGCTGCACGACTTTCAGTTCTTTAATACCCAGAGGCTAAGTGAGCTGTACGAGAAG GAAGTTCGTTTTCTCATGCAAGCTCACCAGAAAAATCAATTAAAAGATAGCATTGAAGTG GAAGAGCCCGAAGATGTCGGAGATCCTTTAACTGCCGACGAGCAGGAAGAGAAGGACAAA TTATTAGAAGAAGGATTTTCAACATGGAGTAGGAGAGATTTCAATACTTTTATCAGGGCA TGTGAGAAGTATGGTCGGAATGACATAGAAAGTATTGCTGCTGAAATGGAAGGAAAGACA GAGGAGGAGCGTTTGGCATGCTTGACATTTGAGCAGTTAAATCTAATGGATGGAGTGCTT GCAGATTATGATAGGATTATAAAGAATATTGAAAGAGGAGAGGCTAGAATTTCACGAAAA GATGAGATCATGAAAGCAATTGGGAAGAAGTTGGACCGCTACAAGAATCCATGGTTGGAG TTGAAGATTCAGTATGGTCAGAACAAAGGAAAATTGTACAATGAGGAGTGTGATCGTTTC ATGATATGTATGGTTCACAAGCTTGGCTATGGAAACTGGGATGAGCTAAAGGCTGCATTC CGAACAGCTCCTTTGTTTCGGTTTGATTGGTTTGTGAAGTCTCGGACAACTCAAGAACTT GCCAGAAGATGTGATACACTTATTCGTTTGGTGGAGAGGGAAAACCAAGAATTTGATGAG AGGGAGAGACAGGCACGCAAAGAAAAGAAACTTGCTAAGAACGCGACACCATCAAAGCGC GCTGTGGCAAGACAAGCAGCCAAAAGCCCTCCCACCTCAAAGAAACGGAAGCAGTCATCA ATGGATGATTTTGTGAGCTCGGCCAAGAGAAGAAGTGATGGTACAACCTAGACAGGCTTT TCTTTTTGTGGTTTAGATCCTCTCTTGTGTTTTTCGTTTAACCAGGTTGGTCATCCAGGA CACTAACTATGCAATGTGTTGGGCATTGCAAATTGCAATTCTGTCAAGTGCTACAGAGGA AAACCCCACCAATGTATTCAGATATGATGTGTAGGTTTATTGTACATAATCACAATAGAA TTCTATTTAGGCTAGTAGTCTTGAACAATGTGGTGCGACACTAATATGTAACTTAATAGA TCAACTTGCCAAATTTATGAATTTGCCAGCTCGCTACTATGCTCTTGTTTGGTGCACATT TATACGCATATGCATTTTTCATATGAAAAGAAAAAGAACCTTGCTTGTTTAATAACGCTA G