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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g067000.3.1
CDS Infomation

Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT3G16510.1)
Sequence

ATGGAGTATCCAACATTAGACATAAATGTTGTCTCCGGAAAAGATCTCAACAAGGTCAAT
CTCATCACAAAAATGGATGTATACGTCGTCGTTTCAATCTCCGGCGCCGATGACGACAGA
TCTAATCAGAAAACCAAAACCCACGTTGATCATGACGGTGACAATAACCCTACCTGGAAT
TTCCCCATCAAATTCACCATAGATGATAGCCCTGCTGTTCAAAACCGTTTGCATCTTGTT
TTCAAGCTTCGATGTCAAAGGGCGCTTGGAGATAAAGATATTGGACAAGTTGAGGTACCC
ATCAAAGAGCTTCTCGAATCTTCCAATACCACTAAACAATTTGTAAGTTATCAAATCAGA
AAACCTTCCGGTAAACCCAAAGGTCAACTCACTTTTTCCTATCAATTTAGTGATAAGATC
ACCGGTAATACTGTCGTTGATTCTAAAATTGAAAACCCCGTTACTGCTTATCCGGCGGCA
AATCCAACCCCGATGGTGGGATCCACTTCTGTGTACCCACCAATACCGCCGCCGCAGCAA
GGTCCAAGTGGGCTATACCCACCGCCTCCGATCTACGCTTCTGGTGGGAGTGGTCCTGCT
CCTCCACCGCCGGTGGCATATCCACCATCTGCAACGGCAGGTTATCCACCGCAACCGATG
GGTTATCCACCAGTTGCAGCGGGAGGATATGGATATGGATATCCACCGGTGGCGGCATAT
ACTCCGCCACCGCAGTATGGATATCCACCTCATCAAGGTGGACATGGATATGGGTATCCA
CAGGTGCAACGGCCGCCGAAGAAGAATAATAATAACATGGCGTTAGGATTAGGGGCGGGT
TTGCTTGGTGGAGCACTTGGAGGAATGATAATCGGAGATGCAATATCAGATGTTGGAGGA
GGTTTTGATGGTGGATTTGGTGATGTTGGGGGATTTGATTTTTGA

Peptide Sequence

PEP ID

Solyc01g067000.3.1
PEP Infomation

Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT3G16510.1)
Sequence

MEYPTLDINVVSGKDLNKVNLITKMDVYVVVSISGADDDRSNQKTKTHVDHDGDNNPTWN
FPIKFTIDDSPAVQNRLHLVFKLRCQRALGDKDIGQVEVPIKELLESSNTTKQFVSYQIR
KPSGKPKGQLTFSYQFSDKITGNTVVDSKIENPVTAYPAANPTPMVGSTSVYPPIPPPQQ
GPSGLYPPPPIYASGGSGPAPPPPVAYPPSATAGYPPQPMGYPPVAAGGYGYGYPPVAAY
TPPPQYGYPPHQGGHGYGYPQVQRPPKKNNNNMALGLGAGLLGGALGGMIIGDAISDVGG
GFDGGFGDVGGFDF*

Transcript Sequence

Transcript ID

Solyc01g067000.3.1
Transcript Infomation

Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *** AT3G16510.1)
Sequence

ATGGAGTATCCAACATTAGACATAAATGTTGTCTCCGGAAAAGATCTCAACAAGGTCAAT
CTCATCACAAAAATGGATGTATACGTCGTCGTTTCAATCTCCGGCGCCGATGACGACAGA
TCTAATCAGAAAACCAAAACCCACGTTGATCATGACGGTGACAATAACCCTACCTGGAAT
TTCCCCATCAAATTCACCATAGATGATAGCCCTGCTGTTCAAAACCGTTTGCATCTTGTT
TTCAAGCTTCGATGTCAAAGGGCGCTTGGAGATAAAGATATTGGACAAGTTGAGGTACCC
ATCAAAGAGCTTCTCGAATCTTCCAATACCACTAAACAATTTGTAAGTTATCAAATCAGA
AAACCTTCCGGTAAACCCAAAGGTCAACTCACTTTTTCCTATCAATTTAGTGATAAGATC
ACCGGTAATACTGTCGTTGATTCTAAAATTGAAAACCCCGTTACTGCTTATCCGGCGGCA
AATCCAACCCCGATGGTGGGATCCACTTCTGTGTACCCACCAATACCGCCGCCGCAGCAA
GGTCCAAGTGGGCTATACCCACCGCCTCCGATCTACGCTTCTGGTGGGAGTGGTCCTGCT
CCTCCACCGCCGGTGGCATATCCACCATCTGCAACGGCAGGTTATCCACCGCAACCGATG
GGTTATCCACCAGTTGCAGCGGGAGGATATGGATATGGATATCCACCGGTGGCGGCATAT
ACTCCGCCACCGCAGTATGGATATCCACCTCATCAAGGTGGACATGGATATGGGTATCCA
CAGGTGCAACGGCCGCCGAAGAAGAATAATAATAACATGGCGTTAGGATTAGGGGCGGGT
TTGCTTGGTGGAGCACTTGGAGGAATGATAATCGGAGATGCAATATCAGATGTTGGAGGA
GGTTTTGATGGTGGATTTGGTGATGTTGGGGGATTTGATTTTTGA